Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LBB2 |
| ProteomeId | EsuBft1006_11 |
| Protein domains | IPR014044 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Max annot lvl | 2759|Eukaryota |
| Length | 29 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.33e-46 |
| EggNOG OGs | COG2340@1|root,KOG3017@2759|Eukaryota |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Description | peptidase inhibitor activity |
| COG category | ADK |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1006_11a-0001 ID=EsuBft1006_11a-0001|Name=EsuBft1006_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=291bp|location=Sequence derived from alignment at Scaffold_472:110..865- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTGGACTGTGAGCTCGGGTGGCAGCAGCAGCACCACCAGCAGCAACAC
CAGGAGAAGCCTGGACGAGTCCGAGGTGCTTTGCTGCATTAACGAATACC
GCAGGGAGCACGGAGCCCCGATGCTGAGGTGGAGCTCGGCGTGCGCCCGC
GAAGCTCAGCGGCGAGCCAGCCACGAGTCCGGGCCGAGCGCCGAGTATGG
CGAGAATCTTGCCAGGAGCACGGATCATAGCTGGAGAGATCCAACGATAG
CTTGTATCGGCTCCATCCACCGGTGGCAGGTACGTGGTTAG back to topprotein sequence of EsuBft1006_11a-0001 >EsuBft1006_11 ID=EsuBft1006_11|Name=EsuBft1006_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=96bp
MWTVSSGGSSSTTSSNTRRSLDESEVLCCINEYRREHGAPMLRWSSACAR
EAQRRASHESGPSAEYGENLARSTDHSWRDPTIACIGSIHRWQVRG back to topmRNA from alignment at Scaffold_472:110..865- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1006_11a-0001 ID=EsuBft1006_11a-0001|Name=EsuBft1006_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=756bp|location=Sequence derived from alignment at Scaffold_472:110..865- (Ectocarpus subulatus male Bft15b)
ATGTGGGTGACAAAATCGAACCTGACTACTTTTGTTGCGGAACTGCTGTA
GCCGGGGGTCGTAGTGGCGGCAGAGGTCGCAGCGGCGATACATTGGACCA
CCTAGCTGTGCTTGACCAGCAAGTCCTCTCTTTGTGCCGTGTGTCCACAG
ACTGTGAGCTCGGGTGGCAGCAGCAGCACCACCAGCAGCAACACCAGGAG
AAGCCTGGACGAGTCCGAGGTGCTTTGCTGCATTAACGAATACCGCAGGG
AGCACGGAGCCCCGATGCTGAGGTGGAGCTCGGCGTGCGCCCGCGAAGCT
CAGCGGCGAGCCAGCCACGAGTCCGGGCCGAGCGCCGAGTATGGCGAGAA
TCTTGCCAGGAGCACGGATCATAGCTGGAGAGATCCAACGATAGCTTGTA
TCGGCTCCATCCACCGGTGGCAGGTACGTCGTGCTGCTGAACGCCGCAGA
AAATTCTGGGAGATCACGCACACCGGTCCTCGCGTCTCTCACCCATGCAT
GTGCAAGAAACCCCGAACGAACCCCGTGTTCCACTCGGAACATAGAAGCT
GGTATATATACAGGTACGTGGGTATGTGCAAATAATGCATGCATTGAGCT
TGGGTCCGACTTTTGCCGGGGGCAATACCAGGGTGGGAAAAGTGTTCGGG
GCTTCGGGGCGGCGCCGAATTTCGCAGAAAATGGCGCAGCGCCGAAATTT
TTTTGGGTACAAGCAGCTTCAATTATTTCGGGGCAAAGCCGCTACAACGC
AGTTAG back to topCoding sequence (CDS) from alignment at Scaffold_472:110..865- >EsuBft1006_11a-0001 ID=EsuBft1006_11a-0001|Name=EsuBft1006_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=291bp|location=Sequence derived from alignment at Scaffold_472:110..865- (Ectocarpus subulatus male Bft15b)
ATGTGGACTGTGAGCTCGGGTGGCAGCAGCAGCACCACCAGCAGCAACAC
CAGGAGAAGCCTGGACGAGTCCGAGGTGCTTTGCTGCATTAACGAATACC
GCAGGGAGCACGGAGCCCCGATGCTGAGGTGGAGCTCGGCGTGCGCCCGC
GAAGCTCAGCGGCGAGCCAGCCACGAGTCCGGGCCGAGCGCCGAGTATGG
CGAGAATCTTGCCAGGAGCACGGATCATAGCTGGAGAGATCCAACGATAG
CTTGTATCGGCTCCATCCACCGGTGGCAGGTACGTGGTTAG back to top
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