EsuBft100_20a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Cross References

External references for this mRNA


Database	Accession
GO	0030139
GO	0002090
GO	0016328
GO	0033365
GO	2001257
GO	0098900
GO	0005200
GO	0030016
GO	0044092
GO	0022403
GO	0045747
GO	0005923
GO	0001885
GO	0003824
GO	0045664
GO	0086019
GO	0043001
GO	0021519
GO	0016881
GO	0051865
GO	0043270
GO	0051347
GO	0071599
GO	0042383
GO	0033157
GO	0007507
GO	0009925
GO	0060218
GO	0005515
GO	0001756
GO	0021521
GO	0005838
GO	0021520
GO	0050808
GO	0042221
GO	0009880
GO	0071709
GO	0042981
GO	0086002
GO	0044449
GO	0032414
GO	0008092
GO	0031324
GO	0030318
GO	0012505
GO	0010882
GO	0086070
GO	0051439
GO	0002474
GO	0048793
GO	0051279
GO	0010605
GO	0048471
GO	0021654
GO	0045202
GO	1902532
GO	0045685
GO	0043266
GO	0008284
GO	0061195
GO	0019899
GO	0031398
GO	0051726
GO	0035315
GO	0001570
GO	0072661
GO	0007409
GO	0000281
GO	0072660
GO	0004842
GO	0002027
GO	0005856
GO	0042803
GO	0007368
GO	0021986
GO	0002028
GO	0048546
GO	0031076
GO	0021508
GO	0060113
GO	0044304
GO	0086066
GO	0042325

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_441:290541..292378-
coding sequence from alignment at Scaffold_441:290541..292378-

spliced messenger RNA

>EsuBft100_20a-0001 ID=EsuBft100_20a-0001|Name=EsuBft100_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1733bp|location=Sequence derived from alignment at Scaffold_441:290541..292378- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGTGGACACCATCCGCGATATTGACAGCTACTCCGCGCTCGACAAAGCC
ATTTGTTTTTGGCCACATTGACGTCGTTCGAGCACTTCTCAGACATGGGG
CGGACGTGAACGCTTGTGACGATGATTATTTTACTCCACTTCACCTTGCT
GCTCAAGAAGATCAGGCCGATGCGATTGATGCGTTGATCCAGGCAGGGGC
CAACACCGAGGCCAGCCGGGGCCGTCGGTGGACGCCCCTGTTCTCTGCGA
TGGAGTACTGCAGTATCAGCGCCATTTACACCCTCCTGCGGCACGGCGCA
TCCTTGACAGTGCAAGACACGGATGGAGACACGCCGTTGCACCGGGCGTG
CTACTGGCAGCATAAAGGCCTGGAGGCGACCGTGGGCCTCTTGCTGCGGT
CGGGAGCGGACGAAACAGCCGTGAATAGCGCTGACGAGACTCCCGCAGAT
TTGCTCGGTTATCTCGACGATGACGATGGTAAAAGATATTCCGAAGCGGA
GATCGAGCGGGTGCGGCTGTTGCTGGCTCGGGCTCCGACCAACCGAGCGT
GGCTTGGCCGTTGCTGGCTCGTGATGCTGCGCTCTTGCGCAAAGACAGGT
AGAGCTTCCACCGACGAAACCGTCGGTGCTGATGAAGATTCAAACGATGC
TGGTGACAGGAAGAGCGGAAAGTTCAAGGGGGTGAGGAGGGAGAATGGGG
AGAGCGCTGGTAGTTGGGTACGCTCTCGGATGAACGGCGCCGGCGAAGTT
GGAGTCGAGGGTGGGGCGGGAGGCTGGGCGAGCATTGTGGCCTCCGTGGT
AGGGCTGGAGCCGGAGAAGGTGTTCCGCTCGATTGTGGGCTTCCTGTGAA
GATAGACGGTGGTCTCGGGAGATCTCAGGAGATATTTACAGGCACGAGCC
CCACTTGTTGGGTATAGTTGGGGTGGTGGTACTCGTACCGAGGGCTCTGT
GCACCGATACACTGGCTGTGGCCTGTGGACATTACGTACGTATGCCTGAC
TAGAACGCGTGGCCCGTGCGTCGTTCCGATACCCGTGCTTCGATCAACAC
CGACATGACACCAACATAATTTGCTGTGTTTTTGCAAGGCACGAATTTTG
TGTTGGTTTAGCCTTTCTGCCTGCTTCTCTCATGTCTACCATGTCGCACA
GACAAACCGGGAAAATCAAATTTCAAATTTGCGACCCTCAAACTCACTTC
TAGCTGCCCTCTACCACCACCGCAACAGCATTGTAGAGTTTCCTCTTGCA
GGGTTAGACGTGTGATTTTAAAGAAGAGCTAACGGGAACCACATGTAAAT
CCGACAGTGTCTCTTGTCGCTCTTTTTTGTTCTGTTCCAAAAGGGAGCCG
GCCCCTCAAGCGCAGATCGATCGCTATCCACGAATTCTGATTTCCCGGCA
GTGCTAGCGCTGGCGCTCCTACCTCCGGGACCGGCGAGCGGAACACATCA
TTTTTTCTTGGTCGTGGTGGCTACCCACAAGGCCTTGCATCAAATCTGGG
CATGTTTTGTTTGCTGCCGCATTGTGGGATGGACAGACGAGGGTATCTGT
GGACGGGTAGAACACGAAAGGGGAAGCTTTTTAGGAGCGTTTTGTCTCAG
TCAAATGAGTGTTGACTGTCTAGCGCCGAGGGGCGGTTCTTGGGTTGGGT
AAATGGTGCTTAGATGCTAAGGTTACGCAACCGTCTTGCGGAATGTAGCA
GTACATTTGCTGAAGGCAGGACAATCCCAGACG

protein sequence of EsuBft100_20a-0001

>EsuBft100_20 ID=EsuBft100_20|Name=EsuBft100_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=282bp
MWTPSAILTATPRSTKPFVFGHIDVVRALLRHGADVNACDDDYFTPLHLA
AQEDQADAIDALIQAGANTEASRGRRWTPLFSAMEYCSISAIYTLLRHGA
SLTVQDTDGDTPLHRACYWQHKGLEATVGLLLRSGADETAVNSADETPAD
LLGYLDDDDGKRYSEAEIERVRLLLARAPTNRAWLGRCWLVMLRSCAKTG
RASTDETVGADEDSNDAGDRKSGKFKGVRRENGESAGSWVRSRMNGAGEV
GVEGGAGGWASIVASVVGLEPEKVFRSIVGFL

mRNA from alignment at Scaffold_441:290541..292378-

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft100_20a-0001 ID=EsuBft100_20a-0001|Name=EsuBft100_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1838bp|location=Sequence derived from alignment at Scaffold_441:290541..292378- (Ectocarpus subulatus male Bft15b)
ATGTGGACACCATCCGCGATATTGACAGCTACTCCGCGCTCGACAAAGCC
ATTTGTTTTTGGCCACATTGACGTCGTTCGAGCACTTCTCAGACATGGGG
CGGACGTGAACGCTTGTGACGATGATTATTTTACTCCACTTCACCTTGCT
GCTCAAGAAGATCAGGCCGATGCGATTGATGCGTTGATCCAGGCAGGGGC
CAACACCGAGGCCAGCCGGGGCCGTCGGTGGACGCCCCTGTTCTCTGCGA
TGGAGTACTGCAGTATCAGCGCCATTTACACCCTCCTGCGGCACGGCGCA
TCCTTGACAGTGCAAGACACGGATGGAGACACGCCGTTGCACCGGGCGTG
CTACTGGCAGCATAAAGGCCTGGAGGCGACCGTGGGCCTCTTGCTGCGGT
CGGGAGCGGACGAAACAGCCGTGAATAGCGCTGACGAGACTCCCGCAGAT
TTGCTCGGTTATCTCGACGATGACGATGGTAAAAGATATTCCGAAGCGGA
GATCGAGCGGGTGCGGCTGTTGCTGGCTCGGGCTCCGACCAACCGAGCGT
GGCTTGGCCGTTGCTGGCTCGTGATGCTGCGCTCTTGCGCAAAGACAGGT
AGAGCTTCCACCGACGAAACCGTCGGTGCTGATGAAGATTCAAACGATGC
TGGTGACAGGAAGAGCGGAAAGTTCAAGGGGGTGAGGAGGGAGAATGGGG
AGAGCGCTGGTAGTTGGGTACGCTCTCGGATGAACGGCGCCGGCGAAGTT
GGAGTCGAGGGTGGGGCGGGAGGCTGGGCGAGCATTGTGGCCTCCGTGGT
AGGGCTGGAGCCGGAGAAGGTGTTCCGCTCGATTGTGGGCTTCCTGTGAA
GATAGACGGTGGTCTCGGGAGATCTCAGGAGATATTTACAGGCACGAGCC
CCACTTGTTGGGTATAGTTGGGGTGGTGGTACTCGTACCGAGGGCTCTGT
GCACCGATACACTGGCTGTGGCCTGTGGACATTACGTACGTATGCCTGAC
TAGAACGCGTGGCCCGTGCGTCGTTCCGATACCCGTGCTTCGATCAACAC
CGACATGACACCAACATAATTTGCTGTGTTTTTGCAAGGCACGAATTTTG
TGTTGGTTTAGCCTTTCTGCCTGCTTCTCTCATGTCTACCATGTCGCACA
GACAAACCGGGAAAATCAAATTTCAAATTTGCGACCCTCAAACTCACTTC
TAGCTGCCCTCTACCACCACCGCAACAGCATTGTAGAGTTTCCTCTTGCA
GGTACATGTTGGTATGCAAGAGTCGTGTGCGGCAAGGCTAGGAAGAATTC
TACGGCCCCCAACAAATGACGTCCTGGTTGGCGTATCACAACAGAAATCC
TGGTAGGGTTAGACGTGTGATTTTAAAGAAGAGCTAACGGGAACCACATG
TAAATCCGACAGTGTCTCTTGTCGCTCTTTTTTGTTCTGTTCCAAAAGGG
AGCCGGCCCCTCAAGCGCAGATCGATCGCTATCCACGAATTCTGATTTCC
CGGCAGTGCTAGCGCTGGCGCTCCTACCTCCGGGACCGGCGAGCGGAACA
CATCATTTTTTCTTGGTCGTGGTGGCTACCCACAAGGCCTTGCATCAAAT
CTGGGCATGTTTTGTTTGCTGCCGCATTGTGGGATGGACAGACGAGGGTA
TCTGTGGACGGGTAGAACACGAAAGGGGAAGCTTTTTAGGAGCGTTTTGT
CTCAGTCAAATGAGTGTTGACTGTCTAGCGCCGAGGGGCGGTTCTTGGGT
TGGGTAAATGGTGCTTAGATGCTAAGGTTACGCAACCGTCTTGCGGAATG
TAGCAGTACATTTGCTGAAGGCAGGACAATCCCAGACG

Coding sequence (CDS) from alignment at Scaffold_441:290541..292378-

>EsuBft100_20a-0001 ID=EsuBft100_20a-0001|Name=EsuBft100_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=849bp|location=Sequence derived from alignment at Scaffold_441:290541..292378- (Ectocarpus subulatus male Bft15b)
ATGTGGACACCATCCGCGATATTGACAGCTACTCCGCGCTCGACAAAGCC
ATTTGTTTTTGGCCACATTGACGTCGTTCGAGCACTTCTCAGACATGGGG
CGGACGTGAACGCTTGTGACGATGATTATTTTACTCCACTTCACCTTGCT
GCTCAAGAAGATCAGGCCGATGCGATTGATGCGTTGATCCAGGCAGGGGC
CAACACCGAGGCCAGCCGGGGCCGTCGGTGGACGCCCCTGTTCTCTGCGA
TGGAGTACTGCAGTATCAGCGCCATTTACACCCTCCTGCGGCACGGCGCA
TCCTTGACAGTGCAAGACACGGATGGAGACACGCCGTTGCACCGGGCGTG
CTACTGGCAGCATAAAGGCCTGGAGGCGACCGTGGGCCTCTTGCTGCGGT
CGGGAGCGGACGAAACAGCCGTGAATAGCGCTGACGAGACTCCCGCAGAT
TTGCTCGGTTATCTCGACGATGACGATGGTAAAAGATATTCCGAAGCGGA
GATCGAGCGGGTGCGGCTGTTGCTGGCTCGGGCTCCGACCAACCGAGCGT
GGCTTGGCCGTTGCTGGCTCGTGATGCTGCGCTCTTGCGCAAAGACAGGT
AGAGCTTCCACCGACGAAACCGTCGGTGCTGATGAAGATTCAAACGATGC
TGGTGACAGGAAGAGCGGAAAGTTCAAGGGGGTGAGGAGGGAGAATGGGG
AGAGCGCTGGTAGTTGGGTACGCTCTCGGATGAACGGCGCCGGCGAAGTT
GGAGTCGAGGGTGGGGCGGGAGGCTGGGCGAGCATTGTGGCCTCCGTGGT
AGGGCTGGAGCCGGAGAAGGTGTTCCGCTCGATTGTGGGCTTCCTGTGA