Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LRS3 |
| ProteomeId | EsuBft100_17 |
| Protein domains | IPR007145 |
| Protein domains | PTHR19321 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | anaphase spindle elongation protein 1 os:schizosaccharomyces pombe (strain 972 atcc 24843) gn:ase1 pe:1 sv:1 [Automatic annotation] |
| Nb exon | 12 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1815 |
| Hectar predicted targeting category | other localisation |
| Evalue | 0.0 |
| EggNOG OGs | KOG4302@1|root,KOG4302@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG ko | ko:K16732 |
| Description | microtubule binding |
| COG category | O |
| BRITE | ko00000,ko03036,ko04812 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0071944 |
| GO | 0043231 |
| GO | 0000280 |
| GO | 0051258 |
| GO | 0005874 |
| GO | 0050794 |
| GO | 0008017 |
| GO | 0000910 |
| GO | 0003824 |
| GO | 0000226 |
| GO | 0016020 |
| GO | 0005819 |
| GO | 1903047 |
| GO | 0044710 |
| GO | 0044238 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft100_17a-0001 ID=EsuBft100_17a-0001|Name=EsuBft100_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1815bp|location=Sequence derived from alignment at Scaffold_441:269191..274220- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTAGCGGCACCCAGACCAGCACCACGGCCAACACTGGGTACCCGCGCCGT
ACACCAGAGAAAAGGCTTTCTTTCACGCCTGTGGATTGTCTCGTTTGATT
GGCACTCTAGTCAGCTTTGCTCGGAGCGTACCATCAAGTGATTGCTCGAC
TCGTGCTGGAGAGCGAGAGGAACCTTGTAACGCAATGTCTGCGTATGTTG
ACGATGCGCCTGCTGCTGATGGGCGTATCGTGGAGCTTGCGAAGCAGACC
ACTTCTCGGCTCGAGGTGCTCTGGGATGAGGTTGGGTATACCTCCGAAGA
GAAGCGTCGTCAGATGCAGGGTCTTGTCGATGGATTTCAGACTCTGTGCG
AGAACAAGGAAAAGCAAGAGGAGGGTGTGAAAAGCCAGTTCGTGACTTCT
ATCGCGGACGCAAAGGATCGAATCAAGACCGCCAGAAAGAAACTCGGACA
GGAGCATACAGAGGACTCCTCCACAGACGACATGAGCCTCACGGACCAGC
TTGCCTATTACGAGATGGAAGCAGATGCAATCAAGAAGATGTGCAAGGCA
CAGCAGGAGAAGTTCGAGAAGTTGTCCGAAGAGTTGGTGCACATGAGCAT
GGTGCTGGGAGATGACTCTGATGCCGACCTGGCTGAGTGGAGGGACCTCG
AGTCTTCCTTAACCAACGAGAGGCTCCAGGCCTTCAAAGACAAGAAGACA
GAGCTCAACAAGGCCACGGAGGACCGCATGCAGACGGTAGCATCACTGGT
GAGCACGGTGCAGGACCTGATGGAAGAGCTCAAGATCCCTGCAGTGACAG
CCCTGGACAACCGCATCTTGGGCTCGCTGGCAATCCCATCCTCTGCCGGA
GTACCAGTTCTTCAAACAACCGAGCGAACGCCATCGTCTGTGGGCATCGA
CAGAGCCGCGCTGGACGAGTTGACTGCGAAACACGAAGAGCTCATCATGC
AGAGGAACACTCGTCGGGAGAAGCTGGAGAAAATGGGCGAGGAGATACTG
GACCTTTGGCAGCAGCTGGACATCGGCAAGGATGAGCAGGATGTGTTCGC
TAAGAGCGTGGACGGGATGGGGCTACAGACGCTGGAGGCTGGAGAAACGG
AACTCAACCGCCTCCGGAAGCTTAAGCTCGAAAAGATGGGAGAACTCGTG
CTGGCGTCCAGGGCAAAGATCCGAGAACTCTGGGATGAGATCGGATACTC
CGAAACCGAGCGGCTTGCGTTTAAGCCAATGCTGGTCACCGAAGAGGGTT
TCACGGACGAGCTCCTGCAACAGCACACACAGGAAGCGGACAAGCTGGCC
ATGAAGTTCGAGACCATGAAACACATCCTGGAGAAAATTGAAGAGCGCGA
AACCCTTGTCGAGCAGCGAATCGAGTACGAGACCAGCACGAAAGACCCGG
ATCGCCTCAGGCCTAAGGGCAGCCAACAAGAGCGCAGAGAGCGACGCCGA
AGGCTCCAGGAGGAACTCGAGGCGGAGAAGCGCATCAAGAACCGTCTCCC
AATGCTCACGAGCAGCCTGTCTAAGACCATCCCCCAGTGGGAGAACGCAC
AAGACTCGGTGTTCCTGTACAAGGGCGAAAGGTACTTGGATACCCTGCAG
CGGTCGGAAGATGAGTACCTAGCTCTCAAGGACCAGATCAAGGCTGCCAA
GGCTGCCACCAAGAAGGTAAAACGCAAAAACATACCCCTGTCCTATATGT
CGACCGGCCGCGGTTGAATCGCGCTTGGATTGCTGCACTCTGCGGGCGCT
TTCTGTGAGGCGAGAGTTCATTCATTTCTTTGCAACAACGCCCCAGTGGT
CTAGTTGGTAACCTC back to topprotein sequence of EsuBft100_17a-0001 >EsuBft100_17 ID=EsuBft100_17|Name=EsuBft100_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=510bp
MSAYVDDAPAADGRIVELAKQTTSRLEVLWDEVGYTSEEKRRQMQGLVDG
FQTLCENKEKQEEGVKSQFVTSIADAKDRIKTARKKLGQEHTEDSSTDDM
SLTDQLAYYEMEADAIKKMCKAQQEKFEKLSEELVHMSMVLGDDSDADLA
EWRDLESSLTNERLQAFKDKKTELNKATEDRMQTVASLVSTVQDLMEELK
IPAVTALDNRILGSLAIPSSAGVPVLQTTERTPSSVGIDRAALDELTAKH
EELIMQRNTRREKLEKMGEEILDLWQQLDIGKDEQDVFAKSVDGMGLQTL
EAGETELNRLRKLKLEKMGELVLASRAKIRELWDEIGYSETERLAFKPML
VTEEGFTDELLQQHTQEADKLAMKFETMKHILEKIEERETLVEQRIEYET
STKDPDRLRPKGSQQERRERRRRLQEELEAEKRIKNRLPMLTSSLSKTIP
QWENAQDSVFLYKGERYLDTLQRSEDEYLALKDQIKAAKAATKKVKRKNI
PLSYMSTGRG back to topmRNA from alignment at Scaffold_441:269191..274220- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft100_17a-0001 ID=EsuBft100_17a-0001|Name=EsuBft100_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5030bp|location=Sequence derived from alignment at Scaffold_441:269191..274220- (Ectocarpus subulatus male Bft15b)
GTAGCGGCACCCAGACCAGCACCACGGCCAACACTGGGTACCCGCGCCGT
ACACCAGAGAAAAGGCTTTCTTTCACGCCTGTGGATTGTCTCGTTTGATT
GGCACTCTAGTCAGCTTTGCTCGGAGCGTACCATCAAGTGATTGCTCGAC
TCGTGCTGGAGAGCGAGAGGAACCTTGTAACGCAATGTCTGCGTATGTTG
ACGATGCGCCTGCTGCTGATGGGCGTATCGTGGAGCTTGCGAAGCAGACC
ACTTCTCGGCTCGAGGTGCTCTGGGATGAGGTTGGGTATACCTCCGAAGA
GAAGCGTCGTCAGATGCAGGGTCTTGTCGATGGATTTCAGACTCTGTGCG
AGAACAAGGTGCGTTTGTCGTTACCTACACACTCGTCAACTATTTTGTAA
AGCTGGACTTCGTCGAGGCACTGCTGTAGTGTGTCTTCAGTATAGCTCCT
CCTCACGCGAGCCCGACCGCAAGGTAATGCCATGCCAACCAGTTACTCTG
TGGAGGGATGCGCCGATATCAGCTAGTTGACAGCATCGTGGTCAATAGTT
GGATGATATTGACTGGCAACAATATGTTGCTGCACGCTTCGCCGGCTCCG
TTCCCTCAGGAAAAGCAAGAGGAGGGTGTGAAAAGCCAGTTCGTGACTTC
TATCGCGGACGCAAAGGATCGAATCAAGACCGCCAGAAAGAAACTCGGAC
AGGAGCATACAGAGGTGTGTTGACGATATTTGATGTCCACTTAGTTCGTG
AGGACGGCCGAAACCTACTCCTATTCTAGCGCTCTAAGATATTGTAGAGT
CACACCGCCGTATCATGAGTATCCATGTGTTTGCCCTGTTGTAGACACCG
GCATCCTGCCGTATACTGGAACATTTCATTCACCCTGTCGCTTGCCCCGA
TTTGTCCACCATTCCCTCCTCTCAGGACTCCTCCACAGACGACATGAGCC
TCACGGACCAGCTTGCCTATTACGAGATGGAAGCAGATGCAATCAAGAAG
GTGGTTATTTCGTTTGTTCACGGGCACAGGGGGCGGCCGAGCAAGTGCTT
TTTTGACGCATCATATGGGTACAGACAGCCGAAGCGTAGAACTTGTAGTC
CATCGTATGCATACATGCTGCCGTGAAATGATTGCACAAGGCTGTAGTCG
TGTTGGTAGAAGCCTCTAGCGACAAACTTGATGTGCTGTCCGTTGGGAGA
AGATTGACAACGTGAGACGCCCGGCAAGTCGGCGCGCGTATTATGGTACA
ACAACAAAAGCGCGATTTACACAACCGCAGGAGAGCGTGAACGAGTACAA
AGCTACAGACAGATTTGCCACTACTGTTATATAAGGGTGTGCCGGGCCTC
TCCTTTGACAGATGTGCAAGGCACAGCAGGAGAAGTTCGAGAAGTTGTCC
GAAGAGTTGGTGCACATGAGCATGGTGCTGGGAGATGACTCTGATGCCGA
CCTGGCTGAGTGGAGGGACCTCGAGTCTTCCTTAACCAACGAGAGGCTCC
AGGCCTTCAAAGACAAGAAGACAGAGCTCAACAAGGCCACGGTGAGCTTT
CGATCCATGGAAATATTGTTATGAAATGTGGAGAACCCGCTAGGGGCGTA
TCAAGTTCCGAACCAAATAAAGAGTCTGGCGGATCCTGCCAACATCGCAC
ACCTCGTCCTGCTTCATGCCAACCACACCCGCACGTTGTGATCGTTGCAC
GTCGTTTCCTTTCCACTGAGTTGTTCAACTCATGAACCGCTTGCTGTTGG
TCTGAATCACCAGGAGGACCGCATGCAGACGGTAGCATCACTGGTGAGCA
CGGTGCAGGACCTGATGGAAGAGCTCAAGATCCCTGCAGTGACAGCCCTG
GACAACCGCATCTTGGGCTCGCTGGCAATCCCATCCTCTGCCGGAGTACC
AGTTCTTCAAACAACCGAGGTATCCTTTCGCCTTGTCGGCTGCGAGATTT
TGTTGGGCAAGTTTTTTTTGGTGCCTACGCCAAATCTCGTTTGTGATTCA
TGCTGGAATATGTCAACCCGTTTGTTTGCTCCCACAGCGAACGCCATCGT
CTGTGGGCATCGACAGAGCCGCGCTGGACGAGTTGACTGCGAAACACGAA
GAGCTCATCATGCAGAGGGTGAGCACGACATTGGGATATTTTTGGTTTCC
AAGTCTCGATGAAATGCTACTAGGGTCGAAGGGGACCCTTCGATCCAAAT
CCTTCCAGAAGACCATCTCTTCAAACAAGGCAAATGAAATGAAGCAGATG
TCCTTTCCCGAGCGGCGGTTTTGAAAAATTAAAAAGATTGACCCGTCAAA
CGTATTATAACCTTGTCCAGAACACTCGTCGGGAGAAGCTGGAGAAAATG
GGCGAGGAGATACTGGACCTTTGGCAGCAGCTGGACATCGGCAAGGATGA
GCAGGTGCCTCTCGTTTCAATGATTTTGCTATGTGGTATGTTAAGAGACG
AAAGGTATCCTCGACAACGGTTTGACATTGCCATACGCTCTGTCAGCGTG
TGGGAACGCCTGCGAAGTGTTGCGACCCTGAGGAGGGTACTCGGTCGGCG
CAAAGATCCGTGCTTCGCGTCTCCCGAGGCTGCCTCGCCCGATACCCTGC
GACACCGCCGTCAAACAGAATTGTATCAGAAGGTTCCGATTGCGCCTCTC
TGGAAACCAGGGGCCGTCAACAACACAACACCGATGGCGTGCGTCCTAAA
CATGAGCGGTATATGACCCGTGAGGCACCCGATGGCGTATTCACATTACA
CCGCTAATGTACGAACCCATTACATGCGTTGCTAGAAGGCCAAGGACAAG
TTAGAAATCAGAAACGCTAATTTAGTGGAGATCCATCCCCTCCGGTTCGC
GCAGGATGTGTTCGCTAAGAGCGTGGACGGGATGGGGCTACAGACGCTGG
AGGCTGGAGAAACGGAACTCAACCGCCTCCGGAAGCTTAAGCTCGAAAAG
ATGGGAGAACTCGTGCTGGCGTCCAGGGCAAAGATCCGAGGTATGCATAC
AGCGGGCACCCGGGAAGGTTTAGTGTGCGTTGATGCCGATGATTTGTTCC
TCTTTCTCTTTGGACCACTGGACTTCGCTACCAAATCGAGTATCTTCGGC
GAGGGCTTGCCATGTCAACGAAATGTCGAGCGTGCTGCAGCCACCGCGTT
GCGAACGGACCGTTCAAATGAGATTTTAACAGCGATGCCCAAATTCAAAG
CGTTTATTTTGCCGTTGTCCCGACATGCGTGATTTCGCCATAGAACTCTG
GGATGAGATCGGATACTCCGAAACCGAGCGGCTTGCGTTTAAGCCAATGC
TGGTCACCGAAGAGGGTTTCACGGACGAGCTCCTGCAACAGCACACACAG
GAAGCGGACAAGCTGGCCATGAAGTTCGAGACCATGAAACACATCCTGGA
GGTGAAGTGGCCAGCATCCTTATCCTTGGGTGTAGACGTTGTCGAGGCTC
TCGAGGGTGCCAACAGTGAAGGTGGAGATATTTCCCTACTCACGGGTTGG
AGTATACGCCGTTGCCTGCCTGACCTGGTGTATTCCACGCCGCACCCTTC
GTTGCCCTTTGCAGAAAATTGAAGAGCGCGAAACCCTTGTCGAGCAGCGA
ATCGAGTACGAGACCAGCACGAAAGACCCGGATCGCCTCAGGCCTAAGGG
CAGCCAACAAGAGCGCAGAGAGCGACGCCGAAGGTGAGGTCGCCCCATCG
AACTTTGTTTGCCCTAGGAACCGTACTGCGCGAGTAGAAGTGGCAACGGT
GGAAGGTGGTGCAACGAAAGGGTCTCGTTCGAAACACATCTCACGGAGTA
TCGTGAAGAGTTGTCAACGAGAATCGAGGATGTAAAGGTTGCGACAGCGG
GTGATTTGGCGTATGCATCTTGTTTTCGCTTTTTGCCTTTCTTATTTGCA
ATGCTGCATTCAACACGCGCTTGTTGATACTGGCTTTGTGTAGTTGCGCG
AGTTTATCTGATCCTTGGGTACCGTCCCCTCCTTCCAGGCTCCAGGAGGA
ACTCGAGGCGGAGAAGCGCATCAAGAACCGTCTCCCAATGCTCACGAGCA
GCCTGTCTAAGACCATCCCCCAGTGGGAGAACGCACAAGACTCGGTGTTC
CTGTACAAGGGCGAAAGGTAACATTTACACCTAGCTTGTGAAAAATACTC
AAAAGCAATTCGGATGAGTCGTTCACAAGTTCACAAGCAGCCTCTTTCGG
GTGCACTACAGCAGTACTGGGGTAGTATGTGATGACACGAAAAGGGTCTG
TTTCTTTTTTCCCGCAAGGCTCGAGTGCTGTGTGTCCCCCTTGATCCCGC
CGTGGTCTCGGCGAGCATTTACGCTGGCTGTGAAGTTTAAGGTCGAAAGC
TACCTCCGTCGGTGCTGTCGCACGATCATTACTGCATACACCCTAAATGG
TGTGAACCCATCCATCAATAACCGTGTGCCCGACCCTACTGTAATCTTGA
ATAGTAAAACATACATCACTTGTCTATTTTCTTGCGGCATGCAGTCGATC
GCCGCCCCAATGATGTCCCACTTTAGCTTTGTGTCGTACAGGCAGGTCAA
CCCGTGGCACTCATAGAGTAGTCGACGGGGCACTACGCCTTTGTGCTTGT
GCGATGGCTGCAGCTTCACTTGTGAACGCATATCGATATTTCTCTTGTGG
CTTTGTCAGTACCACGGTAGTTTTGCAGCGTGGAACCCCAGTGATGATGC
AAAAGTTTTGGTGCTCACAGGTGTCGAAATATTTTGCGTCACTCGAGGTG
TTAGTTCGTAACCGAACGCACGTATGGGATCAAATTTCAATGTCAGGTAC
TTGGATACCCTGCAGCGGTCGGAAGATGAGTACCTAGCTCTCAAGGACCA
GATCAAGGCTGCCAAGGCTGCCACCAAGAAGGTAAAACGCAAAAACATAC
CCCTGTCCTATATGTCGACCGGCCGCGGTTGAATCGCGCTTGGATTGCTG
CACTCTGCGGGCGCTTTCTGTGAGGCGAGAGTTCATTCATTTCTTTGCAA
CAACGCCCCAGTGGTCTAGTTGGTAACCTC back to topCoding sequence (CDS) from alignment at Scaffold_441:269191..274220- >EsuBft100_17a-0001 ID=EsuBft100_17a-0001|Name=EsuBft100_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1533bp|location=Sequence derived from alignment at Scaffold_441:269191..274220- (Ectocarpus subulatus male Bft15b)
ATGTCTGCGTATGTTGACGATGCGCCTGCTGCTGATGGGCGTATCGTGGA
GCTTGCGAAGCAGACCACTTCTCGGCTCGAGGTGCTCTGGGATGAGGTTG
GGTATACCTCCGAAGAGAAGCGTCGTCAGATGCAGGGTCTTGTCGATGGA
TTTCAGACTCTGTGCGAGAACAAGGAAAAGCAAGAGGAGGGTGTGAAAAG
CCAGTTCGTGACTTCTATCGCGGACGCAAAGGATCGAATCAAGACCGCCA
GAAAGAAACTCGGACAGGAGCATACAGAGGACTCCTCCACAGACGACATG
AGCCTCACGGACCAGCTTGCCTATTACGAGATGGAAGCAGATGCAATCAA
GAAGATGTGCAAGGCACAGCAGGAGAAGTTCGAGAAGTTGTCCGAAGAGT
TGGTGCACATGAGCATGGTGCTGGGAGATGACTCTGATGCCGACCTGGCT
GAGTGGAGGGACCTCGAGTCTTCCTTAACCAACGAGAGGCTCCAGGCCTT
CAAAGACAAGAAGACAGAGCTCAACAAGGCCACGGAGGACCGCATGCAGA
CGGTAGCATCACTGGTGAGCACGGTGCAGGACCTGATGGAAGAGCTCAAG
ATCCCTGCAGTGACAGCCCTGGACAACCGCATCTTGGGCTCGCTGGCAAT
CCCATCCTCTGCCGGAGTACCAGTTCTTCAAACAACCGAGCGAACGCCAT
CGTCTGTGGGCATCGACAGAGCCGCGCTGGACGAGTTGACTGCGAAACAC
GAAGAGCTCATCATGCAGAGGAACACTCGTCGGGAGAAGCTGGAGAAAAT
GGGCGAGGAGATACTGGACCTTTGGCAGCAGCTGGACATCGGCAAGGATG
AGCAGGATGTGTTCGCTAAGAGCGTGGACGGGATGGGGCTACAGACGCTG
GAGGCTGGAGAAACGGAACTCAACCGCCTCCGGAAGCTTAAGCTCGAAAA
GATGGGAGAACTCGTGCTGGCGTCCAGGGCAAAGATCCGAGAACTCTGGG
ATGAGATCGGATACTCCGAAACCGAGCGGCTTGCGTTTAAGCCAATGCTG
GTCACCGAAGAGGGTTTCACGGACGAGCTCCTGCAACAGCACACACAGGA
AGCGGACAAGCTGGCCATGAAGTTCGAGACCATGAAACACATCCTGGAGA
AAATTGAAGAGCGCGAAACCCTTGTCGAGCAGCGAATCGAGTACGAGACC
AGCACGAAAGACCCGGATCGCCTCAGGCCTAAGGGCAGCCAACAAGAGCG
CAGAGAGCGACGCCGAAGGCTCCAGGAGGAACTCGAGGCGGAGAAGCGCA
TCAAGAACCGTCTCCCAATGCTCACGAGCAGCCTGTCTAAGACCATCCCC
CAGTGGGAGAACGCACAAGACTCGGTGTTCCTGTACAAGGGCGAAAGGTA
CTTGGATACCCTGCAGCGGTCGGAAGATGAGTACCTAGCTCTCAAGGACC
AGATCAAGGCTGCCAAGGCTGCCACCAAGAAGGTAAAACGCAAAAACATA
CCCCTGTCCTATATGTCGACCGGCCGCGGTTGA back to top
|