EsuBft851_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Properties


Property Name	Value
Seed ortholog	2880.D8LRU9
ProteomeId	EsuBft851_4
Protein domains	IPR002048
Protein domains	IPR018247
Protein domains	IPR011992
Protein domains	SSF47473
Protein domains	IPR018490
Protein domains	IPR018488
Protein domains	PTHR11635
Protein domains	IPR014710
Protein domains	IPR000595
Owner	apollo_admin@sb-roscoff.fr
Nb exon	8
Max annot lvl	2759\|Eukaryota
Length	1357
Hectar predicted targeting category	other localisation
Evalue	1.23e-218
EggNOG OGs	COG0664@1\|root,KOG1113@2759\|Eukaryota
Date last modified	2016-06-14
Date creation	2016-06-14
KEGG ko	ko:K04345,ko:K10273
KEGG Pathway	ko01522,ko04010,ko04014,ko04020,ko04024,ko04062,ko04113,ko04114,ko04138,ko04140,ko04211,ko04213,ko04261,ko04270,ko04310,ko04340,ko04341,ko04371,ko04530,ko04540,ko04611,ko04713,ko04714,ko04720,ko04723,ko04724,ko04725,ko04726,ko04727,ko04728,ko04740,ko04742,ko04750,ko04910,ko04911,ko04912,ko04913,ko04914,ko04915,ko04916,ko04918,ko04919,ko04921,ko04922,ko04923,ko04924,ko04925,ko04926,ko04927,ko04934,ko04961,ko04962,ko04970,ko04971,ko04976,ko05012,ko05020,ko05030,ko05031,ko05032,ko05110,ko05146,ko05165,ko05166,ko05169,ko05200,ko05203,ko05205,ko05414,map01522,map04010,map04014,map04020,map04024,map04062,map04113,map04114,map04138,map04140,map04211,map04213,map04261,map04270,map04310,map04340,map04341,map04371,map04530,map04540,map04611,map04713,map04714,map04720,map04723,map04724,map04725,map04726,map04727,map04728,map04740,map04742,map04750,map04910,map04911,map04912,map04913,map04914,map04915,map04916,map04918,map04919,map04921,map04922,map04923,map04924,map04925,map04926,map04927,map04934,map04961,map04962,map04970,map04971,map04976,map05012,map05020,map05030,map05031,map05032,map05110,map05146,map05165,map05166,map05169,map05200,map05203,map05205,map05414
KEGG Module	M00695
EC	2.7.11.11
Description	cAMP-dependent protein kinase regulator activity
COG category	T
BRITE	ko00000,ko00001,ko00002,ko01000,ko01001,ko03019,ko03036,ko04121

Cross References

External references for this mRNA


Database	Accession
GO	0051239
GO	0044707
GO	0005509
GO	0016310
GO	0004672
GO	0044424
GO	0045926
GO	0050794

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_441:19424..24637-
coding sequence from alignment at Scaffold_441:19424..24637-

spliced messenger RNA

>EsuBft851_4a-0001 ID=EsuBft851_4a-0001|Name=EsuBft851_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1357bp|location=Sequence derived from alignment at Scaffold_441:19424..24637- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CCAGCATTTCGATCAAATGTTAGGCAGCGACCACCGACAAACAATCGCGG
CGGTATCGCGGCTTGCTGCGTACATGGGCCGTACGGGCAAAGGCATCAAC
CACATCTTTAAAGGTGCAGCCTCGTCTGAGCTACAGAATCTGGACTCCAG
CGGTGATGGAAGGCTCTCGCACCAAGAGCTGGAACGGGCGCTCGTGGAGC
TGGACATCAATATCACGACGGTACAAGCCCACGCTCTTGTGACCTTCATG
GGTGAGAACAACGATGGGGGAGCTGGACGGGAAGCTGGACAGGAAGCTGG
CAGCCATATCATAAGGGGAATTCCTCGAAGCACTTTGCTTTATTTGCACC
TCGTAACGTGGCACGTGAAAAACACGGCCCTACACAGCGGCATCTACGTC
AAGCTTTCGTCTCCTTTGCGTGTGTCCCCAGACAACGACGGAGATGGTGA
GATCGACGTTAAGGAGTTAGATAGCACAATCAGGCTGTACAAGCGCCGAA
AGCGAGCGGGCGAGCTGAGCACCTGGCGCGGCAACCTCGACGCCCAACAA
GACCCGGTGTTCCCCAATTGGCTGATCGGCAGGGACGATTTTCAGCAAGT
GTTTTCCAGGCAAGCAAAAAACAACGAATCCACCCGCGGTGACAGGTCGA
ATGAACACACCACATGGGGTGCCGTCGAATCGTCTTTCGCCTTTTCACGA
GGACCGTGGCGGCCGATCAACATTGAGTTTTCGGAGGAGGATGGGGCCTA
CGGGGTACCAGAAATAAAAAAAGCTCTCCAGAAACAACCCGAAGAACGAC
TCCACCGCGATGTGCAGGCTATTACCGGCTGGCTGGGGCAGCAGGATTCG
TTGCGTTCTTTGGGGGCGAAACGGCTAATGGAAGTGACCAACGTGGTGGA
GTGTCAAGAGCTTCGGCCCGAGGAGAAGCTTTTCTCGGAAGGGGACGAAT
CCGAGGCATTCTACATGATACTGGACGGGCACGTCGTGGTTCTTGTGAAA
CAATGCCCTGTGGCCGTTCTAGGGCCGGGGGAGACGTTTGGAGAGCTAGG
TCTGCAGAATCTTGAGAAACGGACCGCGACCGTAAAGGCCGATCCATCGG
GAGCTTTGCTAGTCAGGATGCGTACCAGCGACTATCGACATATTCTTTCA
AAATACCTGATGGACAAGATGCAAATGAAGATCAACCTTCTCCAAGACAC
GTTCGAGCTGGCTAAGAACTGGTCTCACTCCAAGATCAGGGCGTTTGCGT
ACTGCATGGCGCACCACAGCCACGCGAAGGGGGAATACATCTACCGGCAG
GGCGATCCTGCACACAACCTCTACATCGTGTTCAGTGGAAAAGTGAGAAA
ATGCTGA

protein sequence of EsuBft851_4a-0001

>EsuBft851_4 ID=EsuBft851_4|Name=EsuBft851_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=446bp
MLGSDHRQTIAAVSRLAAYMGRTGKGINHIFKGAASSELQNLDSSGDGRL
SHQELERALVELDINITTVQAHALVTFMGENNDGGAGREAGQEAGSHIIR
GIPRSTLLYLHLVTWHVKNTALHSGIYVKLSSPLRVSPDNDGDGEIDVKE
LDSTIRLYKRRKRAGELSTWRGNLDAQQDPVFPNWLIGRDDFQQVFSRQA
KNNESTRGDRSNEHTTWGAVESSFAFSRGPWRPINIEFSEEDGAYGVPEI
KKALQKQPEERLHRDVQAITGWLGQQDSLRSLGAKRLMEVTNVVECQELR
PEEKLFSEGDESEAFYMILDGHVVVLVKQCPVAVLGPGETFGELGLQNLE
KRTATVKADPSGALLVRMRTSDYRHILSKYLMDKMQMKINLLQDTFELAK
NWSHSKIRAFAYCMAHHSHAKGEYIYRQGDPAHNLYIVFSGKVRKC

mRNA from alignment at Scaffold_441:19424..24637-

Legend: exonfive_prime_UTRpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft851_4a-0001 ID=EsuBft851_4a-0001|Name=EsuBft851_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5214bp|location=Sequence derived from alignment at Scaffold_441:19424..24637- (Ectocarpus subulatus male Bft15b)
CCAGCATTTCGATCAAATGTTAGGCAGCGACCACCGACAAACAATCGCGG
CGGTATCGCGGCTTGCTGCGTACATGGGCCGTACGGGCAAAGGCATCAAC
CACATCTTTAAAGGTGCAGCCTCGTCTGAGCTACAGAGTATGCAACTTCT
GCCCTTGACATTGTCACGCTTTTCGTGGAGTGCAATAAACTAAAAGTTGT
GTATTGTGGATGGCATCAGTGTAGCTTTGCTGCTTGCAAGATTGGCACTG
ACAGAGAGCCACGCCCAAGTGTTCATGGCACTATTGGTGGTCTACGCCCT
TACCGTCCTGCGCATACGCTTGAACAGACCTTGGTTCGCAGCTGAGAAGG
TCTTCGCCCACATTGAATGCATCAGACAAGAGGGCGAATTTTCATGTTCC
AGTTCTACTGTATAACTTGCTTGCTGCCACGGAATTTTATAGTTGGCCTG
TGACCACGGAAGGAAGCGGTCCGGGTCAGTTGGATCGGCACGGATGTTAG
AAGGTACCGAGTAGAGACCGAGAACAATTTGATATGAAGCAGTAGATGAA
AACAACCTAACCCAATCCACTTGTTCGTATGCTTAACATTTAGCCTATGG
TAGTGAGAAGCAGTGTGCGTGATAGAATGGCACAGCTATTGCTTGTGAAT
GCTGCCACCGATCAACGCACACTCACATTCATTCACAGATCTGGACTCCA
GCGGTGATGGAAGGCTCTCGCACCAAGAGCTGGAACGGGCGCTCGTGGAG
CTGGACATCAATATCACGACGGTACAAGCCCACGCTCTTGTGACCTTCAT
GGGTGAGAACAACGATGGGGTCCTGCTTACCATACCCATCAAAGTGCACA
CCTGTTTGTGGGGACGAGCATGAGGGGTGGAATATAGTCGATCAGTTCAC
CCACATTTGCAATATGAGCTGCCTTTGATAGTTCTATTATCCATGCAGTG
CAGTATTCTCCCCGTATTTATCAAAGTTGTTCCGTGACACACTCTTGGAA
GCATCGACGAAACAGCAGTTGCAAAATGTGTTTTGATGAATCTCAACGTT
GGTAGGGTGTGTTCCCTCTGGCACGGATTGTCCAGTCTCCCTCCTCGGGA
CAGGGAGCTGGACGGGAAGCTGGACAGGAAGCTGGCAGCCATATCATAAG
GGGAATTCCTCGAAGCACTTTGCTTTATTTGCACCTCGTAACGTGGCACG
TGAAAAACACGGCCCTACACAGCGGCATCTACGTCAAGCTTTCGTCTCCT
TTGCGTGTGTCCCCAGACAACGACGGAGATGGTGAGATCGACGTTAAGGA
GTTAGATAGCACAATCAGGCTGTACAAGCGCCGAAAGCGAGCGGGCGAGC
TGAGCACCTGGCGCGGCAACCTCGACGCCCAACAAGACCCGGTGTTCCCC
AATTGGCTGATCGGCAGGGACGATTTTCAGCAAGTGTTTTCCAGGCAAGC
AAAAAACAACGAATCCACCCGCGGTGACAGGTCGAATGAACACACCACAT
GGGGTGCCGTCGAATCGTCTTTCGCCTTTTCACGAGGACCGTGGCGGCCG
ATCAACATTGAGTATGTTTAGAGGCCGCTTGGAGCACGCGTTCCGTCAAG
GCAGCGCAGTTGCGGATCGGTCAAGCCACCGCCAAAAACCATGCGGTCCC
TACAACAAAACAACTTTTCGAATACGAACGAGTGCAGGTGCTTCGCTTAT
TCCGAAGGGTTTCGGTTTGAGACAAGGGGCATCCGTCATAGGAGCACATC
ACGTTCAACAAACGCAACCTAGGCATGCGAACACAAGGCACCAAAACACT
TGTGTCGAACATGCCTACAGCAACAAGGCCGCTTTTCCCCTACCAATAGC
CCCCTAGCTACCATCGCCTGTGGATGCAGGTAGTGTCTTCAGTTCCTGGT
TCACTCATGAGGTAATGCTCGTTCACGTGTGCTGAATCAGGTTTTCGGAG
GAGGATGGGGCCTACGGGGTACCAGAAATAAAAAAAGCTCTCCAGAAACA
ACCCGAAGAACGACTCCACCGCGATGTGCAGGCTATTACCGGCTGGCTGG
GGCAGCAGGTATCTTCCCTTGTGCACACAGCACACCTACCAGTGCTTGCA
CGCTTTGAAAGCACACATTTTTGAAAGTACGACCAGGATCTATGTGTGTG
CGTGATTCGCAGAGGAAACTCTTAAAGAATTTTTCATTTGATTATAGTAC
AACGTGCAGTCCCGATGAGAGCTACCTTGTATTCCTACCCCAAAGACTGC
AAGGCTCAGGATGCTACCGTGCCCAAGACATGGCTGCTGGAGGTCAGGTC
ATAAAAACCTGTACGCCTTCGCGCCGTCTAGCCAATACTCCACAATGACG
ACGGCTACCGCGCACCTACACAATCGTAGAACATCATCTCACGAATTTCC
ACCTGATGACCTGCTAGGTTGGATCGCGCACGATCTAAGAGCCGTCCATG
ACACTGACACTGGTCGTATTCGTTCGAAATTTCCCTTCAGGATTCGTTGC
GTTCTTTGGGGGCGAAACGGCTAATGGAAGTGACCAACGTGGTGGAGTGT
CAAGAGCTTCGGCCCGAGGAGAAGCTTTTCTCGGAAGGGGACGAATCCGA
GGTGCATGAAAAGACGAACAAGCACTCACAAGTGCGCTCTTTGGCTACTT
TTGTGTAGTGGTTTACCAGATGTTGTTGAAGAGCCAAAGTCTGGCTGATA
AGGGAAATGGTGGCTGGGAACGGATACGATACGTTCCGAACAGCGCTTTC
AGGTGAAACACGGTTTCGTCGGTCAACCTTGCGGGTTTGTGTGGCGCCCA
CAGGATCAGCAGACGGAATTACTTCGGTGTCTCGGGATTCTCCTGAGCAA
CCTGTACCTTCTCTAAGCGTATTTCTTGTTGCATGCAGTACTCCGAACGC
CATGGTGTACATTGTGCATTGTGTTTTGCAGAGGACGCGAGTATTTCAAA
CAGATAACCGTGGCTCGGTTTTGGCTCGTCTTCCTCGCGAGCCACACTGT
TTCAGTTGTCTTGTCTTGCCTTTCCCTTGCTACAAGAACGTCGCCTCGAC
TTTTTTCCGAACAGGGTCCCCGGCTCCTACACCGCGGTGACAGCGAACGG
GCCCTTGAAGAGACAGGAACTTGTTTCTTCCTTCTGGCAAACGGCCCGTA
CCATCAGCCCGTGCCTCGAGTACATGCCCAAATCACACCAACATTTCCCC
ACGGGTATCGTCTTCAGTAGACCACTGTTTCGGTCAACAAAACACCTGAA
AACTGGACGTCTTACTTTGTCGCGTTGAAGAGGGCCGCGTCCTACAGCAG
TTGCGTACTGTCTCGAGCCGATCTTCCGTCCATGCCGCCCCCACCCCACT
GCACGACGTGGTTACAGGCATTCTACATGATACTGGACGGGCACGTCGTG
GTTCTTGTGAAACAATGCCCTGTGGCCGTTCTAGGGCCGGGGGAGACGTT
TGGAGAGCTAGGTCTGCAGAATCTTGAGAAACGGACCGCGACCGTAAAGG
TGGGCTGATGACTTGGATTTCCAACATTCTTCGTATACCGTGTACCAAAT
AGCATGACGTTAAAAGGGTTCGCTTATTCCAGACCCGCCGTATACTGCGT
AGGGCACAGATGGCTGGAAGAGCGGCCGTGAAGTGTTGTGCACCGTGCTG
ATTTGTCCGTGCAAATGGTGATCGGTAGTGTGGGTTACTACGCGATGATA
CCCAGTTACGGGACGTGCTCGACATGTGTTGCGCACAGTACCCGGAATCT
GTGTCTTCGTAGGGTTACTTCTAACAGAAGGAACCCGCCTGACTCGTAAG
CGCGGACTCAACGACCTTTCAGGCTACAAAGTACCGGAGAACGAATACGC
GCACGAGAAGATACAGAGATCATGTCGCTGTATGTACAACAGTTGGAAGA
ACATTATTAGTGTGCAAGGTGTGGCTGACACTACAGAGCGATTCAAAGCA
GTCTTATTTTCTCGTGTGTCATAGTTAGAACACAGGTCGTTCCTTGCCGT
CCAAAGGCTCCTAGTCGGGTAGATGCCAGTAGTTGCCCTGGTGACAAATT
ACCGACGCTGCGGCAGCCTACTCTTTTTCGAACCGCAAGAAATTAGCAAT
ACGTGTTAAGCCTACTGGCCGCTGGTCAACTGAACGGCCGTTTGTGCGTC
AACTTCCATAGGCCGATCCATCGGGAGCTTTGCTAGTCAGGATGCGTACC
AGCGACTATCGACATATTCTTTCAAAATACCTGATGGACAAGATGCAAAT
GAAGGTACGACGGCAATTCTGCAACGAGGGAAAGGGGGAGGGGGCTCCTG
TACCGCCTGTTTGGGTATTTCTCAGGGCAGCTACGTAGATCAAGATACCT
ATGTTGCAGGGTGCAGGATGAATATCCTAATGGACAAGATGCGTGTCAAG
TTTAGCGTGCATGCTGCGCTACTTCGGTGATGGCGAATGGGCGATTAAAC
AAACACCTGAGATCTCGGAATCCCAGCACCAGCTTCAACATCTACTGAGA
ACCCTTCATGACTGCTAACTCAAGCCAACCCCAACCCTCCAACCCCACCG
CGCTTGCCCTGGAAATGTTCATCTCGCTGCCGTAGCCACGAGACATCTGC
ACGTTGCACCTAATTTGTGGCGTATTTTACTCTCGGGATGTGTTTTTGAC
CACGTGCTTTCACAACACTACGCCAGACATAGTTCGAAACGGGGTCGGAC
ACTGACAAGAGCATCCAAATGCAAGAGGGATCGATTTAGTATCCTCCACA
TTTCCGCTGCAGGGTGATTGGGGTGGTGCTATCAACGCCAAATTGTGTGG
TGACCCTTCGGCTGGGAGAATTCGTGTTTCTGGAACCTCCTCCGCAGTGT
GGGGTGTTTACGTGTTTGCCGAAAAGGCCGTGTGGTGAAGTGAAAGCCCG
CCCAATGTTGAAGTCACCGATTCCGCAGCTGCGTCGATCTGGTGAGGAAA
CGCATGCCATCGTTGTTTTCCGTCCCTGTGTTATGTTCGAACGCACACAT
GGCCCGTGGTGTTATGTGCGTGACATGAACGAGACAGATCAACCTTCTCC
AAGACACGTTCGAGCTGGCTAAGAACTGGTCTCACTCCAAGATCAGGGCG
TTTGCGTACTGCATGGCGCACCACAGCCACGCGAAGGGGGAATACATCTA
CCGGCAGGGCGATCCTGCACACAACCTCTACATCGTGTTCAGTGGAAAAG
TGAGAAAATGCTGA

Coding sequence (CDS) from alignment at Scaffold_441:19424..24637-

>EsuBft851_4a-0001 ID=EsuBft851_4a-0001|Name=EsuBft851_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1341bp|location=Sequence derived from alignment at Scaffold_441:19424..24637- (Ectocarpus subulatus male Bft15b)
ATGTTAGGCAGCGACCACCGACAAACAATCGCGGCGGTATCGCGGCTTGC
TGCGTACATGGGCCGTACGGGCAAAGGCATCAACCACATCTTTAAAGGTG
CAGCCTCGTCTGAGCTACAGAATCTGGACTCCAGCGGTGATGGAAGGCTC
TCGCACCAAGAGCTGGAACGGGCGCTCGTGGAGCTGGACATCAATATCAC
GACGGTACAAGCCCACGCTCTTGTGACCTTCATGGGTGAGAACAACGATG
GGGGAGCTGGACGGGAAGCTGGACAGGAAGCTGGCAGCCATATCATAAGG
GGAATTCCTCGAAGCACTTTGCTTTATTTGCACCTCGTAACGTGGCACGT
GAAAAACACGGCCCTACACAGCGGCATCTACGTCAAGCTTTCGTCTCCTT
TGCGTGTGTCCCCAGACAACGACGGAGATGGTGAGATCGACGTTAAGGAG
TTAGATAGCACAATCAGGCTGTACAAGCGCCGAAAGCGAGCGGGCGAGCT
GAGCACCTGGCGCGGCAACCTCGACGCCCAACAAGACCCGGTGTTCCCCA
ATTGGCTGATCGGCAGGGACGATTTTCAGCAAGTGTTTTCCAGGCAAGCA
AAAAACAACGAATCCACCCGCGGTGACAGGTCGAATGAACACACCACATG
GGGTGCCGTCGAATCGTCTTTCGCCTTTTCACGAGGACCGTGGCGGCCGA
TCAACATTGAGTTTTCGGAGGAGGATGGGGCCTACGGGGTACCAGAAATA
AAAAAAGCTCTCCAGAAACAACCCGAAGAACGACTCCACCGCGATGTGCA
GGCTATTACCGGCTGGCTGGGGCAGCAGGATTCGTTGCGTTCTTTGGGGG
CGAAACGGCTAATGGAAGTGACCAACGTGGTGGAGTGTCAAGAGCTTCGG
CCCGAGGAGAAGCTTTTCTCGGAAGGGGACGAATCCGAGGCATTCTACAT
GATACTGGACGGGCACGTCGTGGTTCTTGTGAAACAATGCCCTGTGGCCG
TTCTAGGGCCGGGGGAGACGTTTGGAGAGCTAGGTCTGCAGAATCTTGAG
AAACGGACCGCGACCGTAAAGGCCGATCCATCGGGAGCTTTGCTAGTCAG
GATGCGTACCAGCGACTATCGACATATTCTTTCAAAATACCTGATGGACA
AGATGCAAATGAAGATCAACCTTCTCCAAGACACGTTCGAGCTGGCTAAG
AACTGGTCTCACTCCAAGATCAGGGCGTTTGCGTACTGCATGGCGCACCA
CAGCCACGCGAAGGGGGAATACATCTACCGGCAGGGCGATCCTGCACACA
ACCTCTACATCGTGTTCAGTGGAAAAGTGAGAAAATGCTGA