Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G7W9 |
| ProteomeId | EsuBft943_6 |
| Protein domains | IPR029063 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Max annot lvl | 2759|Eukaryota |
| Length | 54 |
| Hectar predicted targeting category | other localisation |
| Evalue | 9.55e-48 |
| EggNOG OGs | 2E18F@1|root,2S8KF@2759|Eukaryota |
| Ec32 ortholog description | S-adenosyl-L-methionine-dependent methyltransferase |
| Ec32 ortholog | Ec-06_000010.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Methyltransferase domain |
| COG category | S |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft943_6a-0001 ID=EsuBft943_6a-0001|Name=EsuBft943_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=549bp|location=Sequence derived from alignment at Scaffold_420:528744..529461+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCCGCCGTCGGTTTGGGGCGGAGAGCACCTCCACGTCGGCCTTCACTC
CAAGCTCGAGGGGGAACACGCCAAGCTGGAGGGGTTGGAGCGCATCAGAA
AGGCCAGCTCCCTGAGCACCGACGAGCTCCTCTCACGGTGCTTCCCCTCC
GGCACGAATGGCAATGGCGCTCCCCCCTCGGCGGAGTGTACCATGGTGGA
CCTTGGGTGCGGGTACGGGGGCACTGCGAGGGTGGCTACCAAGAAGCTTG
GCTGCAAGGTGGGTCGCTACAATGCTGCTTGCTGTGATGTTTACCAAATG
CCCAGGGTAGAAGATCAAAGGAGGGGGCGCGGAGGAAACGGGATGTTGCT
CACTTGTCTTATAGCGGGGCAAGGCTTGGGAGCATGTGTCATGTCTGATT
GATGTCTGGTGTCGCGCCATCCCCTCGCATGGTGGTTTCGTTCTTCCTAT
CTCGTTTGTTCTTGCCACCAGGTGGTGTGCATCAACGTTTCGAAGCGTGA
GAACGAGACGAACGTCGCCATGACCAAAGAGGCCGGCCTCCAAGACAGG back to topprotein sequence of EsuBft943_6a-0001 >EsuBft943_6 ID=EsuBft943_6|Name=EsuBft943_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=133bp
MPPSVWGGEHLHVGLHSKLEGEHAKLEGLERIRKASSLSTDELLSRCFPS
GTNGNGAPPSAECTMVDLGCGYGGTARVATKKLGCKVGRYNAACCDVYQM
PRVEDQRRGRGGNGMLLTCLIAGQGLGACVMSD back to topmRNA from alignment at Scaffold_420:528744..529461+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft943_6a-0001 ID=EsuBft943_6a-0001|Name=EsuBft943_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=718bp|location=Sequence derived from alignment at Scaffold_420:528744..529461+ (Ectocarpus subulatus male Bft15b)
ATGCCGCCGTCGGTAATACAACTGGGACGTTCCTTCCCATGACTTTCCTT
CTTTGTCAAAACCTCCCCCCCTTGTATGCATAGACTGCCGTAACTGTAGT
AGTCTTCAACATCGAATCGAAAAATATTCCATGTGAACAAAATCAATATC
AAAATGCACATGTTTTTGTTCATGTTTACAGGTTTGGGGCGGAGAGCACC
TCCACGTCGGCCTTCACTCCAAGCTCGAGGGGGAACACGCCAAGCTGGAG
GGGTTGGAGCGCATCAGAAAGGCCAGCTCCCTGAGCACCGACGAGCTCCT
CTCACGGTGCTTCCCCTCCGGCACGAATGGCAATGGCGCTCCCCCCTCGG
CGGAGTGTACCATGGTGGACCTTGGGTGCGGGTACGGGGGCACTGCGAGG
GTGGCTACCAAGAAGCTTGGCTGCAAGGTGGGTCGCTACAATGCTGCTTG
CTGTGATGTTTACCAAATGCCCAGGGTAGAAGATCAAAGGAGGGGGCGCG
GAGGAAACGGGATGTTGCTCACTTGTCTTATAGCGGGGCAAGGCTTGGGA
GCATGTGTCATGTCTGATTGATGTCTGGTGTCGCGCCATCCCCTCGCATG
GTGGTTTCGTTCTTCCTATCTCGTTTGTTCTTGCCACCAGGTGGTGTGCA
TCAACGTTTCGAAGCGTGAGAACGAGACGAACGTCGCCATGACCAAAGAG
GCCGGCCTCCAAGACAGG back to topCoding sequence (CDS) from alignment at Scaffold_420:528744..529461+ >EsuBft943_6a-0001 ID=EsuBft943_6a-0001|Name=EsuBft943_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=402bp|location=Sequence derived from alignment at Scaffold_420:528744..529461+ (Ectocarpus subulatus male Bft15b)
ATGCCGCCGTCGGTTTGGGGCGGAGAGCACCTCCACGTCGGCCTTCACTC
CAAGCTCGAGGGGGAACACGCCAAGCTGGAGGGGTTGGAGCGCATCAGAA
AGGCCAGCTCCCTGAGCACCGACGAGCTCCTCTCACGGTGCTTCCCCTCC
GGCACGAATGGCAATGGCGCTCCCCCCTCGGCGGAGTGTACCATGGTGGA
CCTTGGGTGCGGGTACGGGGGCACTGCGAGGGTGGCTACCAAGAAGCTTG
GCTGCAAGGTGGGTCGCTACAATGCTGCTTGCTGTGATGTTTACCAAATG
CCCAGGGTAGAAGATCAAAGGAGGGGGCGCGGAGGAAACGGGATGTTGCT
CACTTGTCTTATAGCGGGGCAAGGCTTGGGAGCATGTGTCATGTCTGATT
GA back to top
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