EsuBft119_17 (polypeptide) Ectocarpus subulatus male Bft15b

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEsuBft119_17a-0001
Unique NameEsuBft119_17
Typepolypeptide
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Sequence length250
Homology
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BLAST of EsuBft119_17a-0001 vs. uniprot
Match: A0A6H5JB74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB74_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.360e-6
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0 
Query:   55 APGEGAGHNAGXXXXXXXXXXXXXXXXXXXXXXXXXDAGXGGGXXXXXXXXXXXXXXXXXXXXXSLATGGAAXPGEGAGHNAGPE 139
            APGEGAGHNAGXXXXXXXXXXXXXXXXXXXXXXXXXDAGXGGGXXXXXXXXXXXXXXXXXXXXXSLATGGAAXPGEGAGHNAGPE
Sbjct:   55 APGEGAGHNAGXXXXXXXXXXXXXXXXXXXXXXXXXDAGXGGGXXXXXXXXXXXXXXXXXXXXXSLATGGAAXPGEGAGHNAGPE 139
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BLAST of EsuBft119_17a-0001 vs. uniprot
Match: A0A6H5JRV1_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRV1_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 6.920e-12
Identity = 35/41 (85.37%), Postives = 36/41 (87.80%), Query Frame = -3 
Query:  578 FRGPRCGPRLRLVLPLRRSRGCPRHRHPPFHRRPLLLPPPD 700
             RGPRCGPRLRLVLPLRRSRG PRHR+PP HR PLL PPPD
Sbjct:  497 LRGPRCGPRLRLVLPLRRSRGRPRHRYPPSHRSPLLQPPPD 537
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BLAST of EsuBft119_17a-0001 vs. uniprot
Match: A0A6H5JYT9_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JYT9_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 9.500e-9
Identity = 36/43 (83.72%), Postives = 36/43 (83.72%), Query Frame = -1 
Query:  571 FGARVVARAFAWCCRSAGREAARVIDIRLSTAARCCYRRRTVA 699
            FGARVVARAFAWCCR A  EAAR IDIR STAARC  RRRTVA
Sbjct:  457 FGARVVARAFAWCCRFAAPEAARAIDIRRSTAARCRCRRRTVA 499
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BLAST of EsuBft119_17a-0001 vs. uniprot
Match: A0A6H5JV84_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV84_9PHAE)

HSP 1 Score: 65.5 bits (158), Expect = 1.590e-8
Identity = 35/41 (85.37%), Postives = 35/41 (85.37%), Query Frame = -1 
Query:  577 FGARVVARAFAWCCRSAGREAARVIDIRLSTAARCCYRRRT 699
            FGARVVARAFAWCCRSA  EAAR IDIR STAARC  RRRT
Sbjct:   91 FGARVVARAFAWCCRSAAPEAARAIDIRRSTAARCRCRRRT 131
[Close]
BLAST of EsuBft119_17a-0001 vs. uniprot
Match: A0A6H5JB74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JB74_9PHAE)

HSP 1 Score: 58.5 bits (140), Expect = 1.380e-6
Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 1 
Query:  163 APGEGAGHNAGXXXXXXXXXXXXXXXXXXXXXXXXXDAGXGGGXXXXXXXXXXXXXXXXXXXXXSLATGGAAXPGEGAGHNAGPE 417
            APGEGAGHNAGXXXXXXXXXXXXXXXXXXXXXXXXXDAGXGGGXXXXXXXXXXXXXXXXXXXXXSLATGGAAXPGEGAGHNAGPE
Sbjct:   55 APGEGAGHNAGXXXXXXXXXXXXXXXXXXXXXXXXXDAGXGGGXXXXXXXXXXXXXXXXXXXXXSLATGGAAXPGEGAGHNAGPE 139
The following BLAST results are available for this feature:
BLAST of EsuBft119_17a-0001 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JB74_9PHAE1.360e-6100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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BLAST of EsuBft119_17a-0001 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A6H5JRV1_9PHAE6.920e-1285.37Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JYT9_9PHAE9.500e-983.72Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JV84_9PHAE1.590e-885.37Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JB74_9PHAE1.380e-6100.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 1..250

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_420contigScaffold_420:497418..498170 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft119_17a-0001EsuBft119_17a-0001Ectocarpus subulatus male Bft15bmRNAScaffold_420 497418..498170 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EsuBft119_17 ID=EsuBft119_17|Name=EsuBft119_17a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=250bp
MDEDDQSGSGGDGDGGADPGGGGDGDGPAAVAAAGGGGAPDVDGAGGLGS
GGAAAPGEGAGHNAGPEGGDGSDGPAAVAAAGGGGRPDIDDAGXGGGDGP
AAVAAAGGGGKADVDDAGSLATGGAAAPGEGAGHNAGPEGGDGSDGPAAV
AAAGGGGKADVDDAGSLATGGAAAPGEGAGHNAGPEGGDGSDGPAAVAAA
GGGGKADVDDAGSLATGGAAAPGEGAGHNAGPETAAAAATIRRRSDDLEG
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