Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft119_15 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 55 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft119_15a-0001 ID=EsuBft119_15a-0001|Name=EsuBft119_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=556bp|location=Sequence derived from alignment at Scaffold_420:491148..491953- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCTCGCATTTTCGTGGTACGACAGCGATGGCCTTTTGCACGCATCGCCGT
CACAGGGACCTTCGGGACAGCCTCAAGTCCGCCGCGGTGGCTCGAGTACG
CTCGTGCCCACCGCGTCCCCTCCAGACCCTTCGCGACGTTCCTCTACGGA
GCATCAACGTCGCACGGTGCTGACTGCACCACCGTTGCCGAGCGCAGGTA
ACGGTTTTCCCAAATGGGAAGAATCATGTTCTTTGTCACGAAGTAGCGGT
CCCGAGCCTCCCGCGGCCGCTGGCCATGTTGGTCGAGCGCCCGCGAAGAA
GGCCGCTTTCAATGAACAGGCCTACGCCGACGTTTTGAGCGAAAACGCCC
GCGTCGACCGCTTGGTTTCGCACGCTTCTGCGGCTGGTTCACCGCTTTTG
CCTGCCTCTCCTCGTAACTCACAATCCGGCCCGCCTTCGGGTGGCACCCA
GATTGTCCTCCCGGTTGCCGGTGCCATTTCCCTTGATAATATTTCTTCGG
GGAAGGTAAGCGCACCCGCGCGACAGGCCCCTGTTGTTGATGGTAGTCAG
GGATAT back to topprotein sequence of EsuBft119_15a-0001 >EsuBft119_15 ID=EsuBft119_15|Name=EsuBft119_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=48bp
MAFCTHRRHRDLRDSLKSAAVARVRSCPPRPLQTLRDVPLRSINVARC back to topmRNA from alignment at Scaffold_420:491148..491953- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft119_15a-0001 ID=EsuBft119_15a-0001|Name=EsuBft119_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=806bp|location=Sequence derived from alignment at Scaffold_420:491148..491953- (Ectocarpus subulatus male Bft15b)
CCTCGCATTTTCGTGGTACGACAGCGATGGCCTTTTGCACGCATCGCCGT
CACAGGTATGTGTTGGACTTCCAACCTTTTGTGTCTCAGATATATATCGC
CCGCGCCTCATCACAACTTGTTTTGGGCGACCGTCGTGACTTGTCGGTGC
CGACTACAGCCTTGTGGTGTGGGCGCGGGAACGATAAGACGTCGGGTGTC
TCACGGACGCTCGCCCCGATGCCTATGCCCTCTGGAGGCATGGCTTCCGC
GCCTCCCACCGTTTCGGCGGCTCCGAGTGGTCTAGTCAACCTCGTCGGGG
CTCAGGGACCTTCGGGACAGCCTCAAGTCCGCCGCGGTGGCTCGAGTACG
CTCGTGCCCACCGCGTCCCCTCCAGACCCTTCGCGACGTTCCTCTACGGA
GCATCAACGTCGCACGGTGCTGACTGCACCACCGTTGCCGAGCGCAGGTA
ACGGTTTTCCCAAATGGGAAGAATCATGTTCTTTGTCACGAAGTAGCGGT
CCCGAGCCTCCCGCGGCCGCTGGCCATGTTGGTCGAGCGCCCGCGAAGAA
GGCCGCTTTCAATGAACAGGCCTACGCCGACGTTTTGAGCGAAAACGCCC
GCGTCGACCGCTTGGTTTCGCACGCTTCTGCGGCTGGTTCACCGCTTTTG
CCTGCCTCTCCTCGTAACTCACAATCCGGCCCGCCTTCGGGTGGCACCCA
GATTGTCCTCCCGGTTGCCGGTGCCATTTCCCTTGATAATATTTCTTCGG
GGAAGGTAAGCGCACCCGCGCGACAGGCCCCTGTTGTTGATGGTAGTCAG
GGATAT back to topCoding sequence (CDS) from alignment at Scaffold_420:491148..491953- >EsuBft119_15a-0001 ID=EsuBft119_15a-0001|Name=EsuBft119_15a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=147bp|location=Sequence derived from alignment at Scaffold_420:491148..491953- (Ectocarpus subulatus male Bft15b)
ATGGCCTTTTGCACGCATCGCCGTCACAGGGACCTTCGGGACAGCCTCAA
GTCCGCCGCGGTGGCTCGAGTACGCTCGTGCCCACCGCGTCCCCTCCAGA
CCCTTCGCGACGTTCCTCTACGGAGCATCAACGTCGCACGGTGCTGA back to top
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