Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft119_9 |
| Protein domains | IPR002048 |
| Protein domains | IPR011992 |
| Protein domains | IPR018247 |
| Protein domains | SSF47473 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Length | 49 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0005509 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft119_9a-0001 ID=EsuBft119_9a-0001|Name=EsuBft119_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=492bp|location=Sequence derived from alignment at Scaffold_420:419621..421198- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCTCAAGGCTCACGGGCTATCACCCGACGACTGGCTGCAGGAGCTCCT
GTCCAGAAGGAAACAGGATCGCTTGACGACGTTCGAAATGGGCGAGAGTA
TCCGTGGCTATAACAGGGCGAAGCCCGCGTGGGTCAGGTCCCACAAGCAT
TGGCTACGCGAGTTCATGATCTCGGAGAAGGACCTTCGCTGGTGCCAGCG
ATTCGTGGACCCCGACGGGCTCATTGCGGTCGTGTCTTTCTCGTACGGGT
GCCGGAACACCGACATCGACGAGGAGGAGCTTTCAAACGCCGTTAGATCT
ACGCTCGACGGGAAGCCCCGCATGTCATTGGAAGAGAGCCGGGCGGTGGA
ACTCATCCTGGAATTCGAAAATTTCATATCGACCAACCGTATCCGGCTGG
TCGACCTCTTTGAGAGGGTCGACAAAGACAAGGGAGGAACCGTGGACGGC
GAAGAGCTCAGGGAGTTTTTGAAGCTTGGGAGGAAAACGTGA back to topprotein sequence of EsuBft119_9a-0001 >EsuBft119_9 ID=EsuBft119_9|Name=EsuBft119_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=163bp
MLKAHGLSPDDWLQELLSRRKQDRLTTFEMGESIRGYNRAKPAWVRSHKH
WLREFMISEKDLRWCQRFVDPDGLIAVVSFSYGCRNTDIDEEELSNAVRS
TLDGKPRMSLEESRAVELILEFENFISTNRIRLVDLFERVDKDKGGTVDG
EELREFLKLGRKT back to topmRNA from alignment at Scaffold_420:419621..421198- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft119_9a-0001 ID=EsuBft119_9a-0001|Name=EsuBft119_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1578bp|location=Sequence derived from alignment at Scaffold_420:419621..421198- (Ectocarpus subulatus male Bft15b)
ATGCTCAAGGCTCACGGGCTATCACCCGACGACTGGCTGCAGGAGCTCCT
GTCCAGAAGGTTAGCTGCTATAGGGTGTGAGCGTTCCAACTCCGAAGCAC
AGGGCGCATAGTTTTTCAACAACTCTGCCTCGTAAATCAGCTAGACCCGG
AATTTGACATTCGGCATGGGGCCGGGGCTTTCTACATCAAGAACAATACG
GTGTGGCTGATTTTTCCCCTCCCACCCTTCACAGTCGGAACTCATGTATG
TCTGACTCTGATATCCGCTCCAGTCACCGTCCCCACCCTTCCGCCTTTTG
CGTCTGTTCTATCCTTCCCTCTAACCTAGGAAACAGGATCGCTTGACGAC
GTTCGAAATGGGCGAGAGTATCCGTGGCTATAACAGGGCGAAGCCCGCGT
GGGTCAGGTCCCACAAGCATTGGCTACGCGAGTTCATGATCTCGGAGAAG
GACCTTCGCTGGTGCCAGCGATTCGTGGACCCCGACGGGTGAGAACACGG
AGGCATATACCAGGCTCAAGGCTACGGGGTGATTTGTGTCCGAGTGCCTA
TCACCCATTCTTTGTCGGTTGAAGTGAAAATATCTTGCAGGTCTTTGTTG
CTCAACCTTGAGCGAGGCAAAAATTTCAAGGGCAGTCAGTGCCAGGACTA
ATTTGGTACGTGTCATCAGGCTCATTGCGGTCGTGTCTTTCTCGTACGGG
TGCCGGTACGTGGGTCCTTTCAGCTTGGAGAGCCGGCGTCAATCGGCTCG
TATCCTGTCATTTCTACGCCGCAGCGGCGTGCCCGCGTAACCGGTTATCA
CGTGCACTACTGCCCCGCACAATGAGTTGTCGCATGTCTCTCCTTCAAAG
CGGCTGCCGATACGCGTGCCGCATGGTAGACAGTTGCAGCTTGCTTCTTT
TGGTAGACTATCGCTTCCTCATCTTCTGCGGAATGGTTGTTGATGGAGGT
CATTTCTAATTGTGAAAGGGAACGGGGACGGAGGACAATCTGGTGCAGGA
ATATGTCCACCTGTTCGAAAATCACAGAGCATGCGCTCCGTCGACCTTTG
TCGTTGGGGAACCGTCGTCCACATCGGAAAAATGTGCAATGCATCAGGAA
CACCGACATCGACGAGGAGGAGCTTTCAAACGCCGTTAGATCTACGCTCG
ACGGGAAGCCCCGCATGTCATTGGAAGAGAGCCGGTGAGAAGGGTCGTCG
AATAGGAAGCTATGCGGACACCATATGGTAGATCGTGTTCAGCGCCGGCA
GCAGAGATTTGTTTCATTCGCCTGCAGCGTATACCCCGACAACTCGGGAA
GACTGCCAGCCTAGGGTTTCCGGTGAACGCATGATGCGATTGGATGTTTT
TCTTCTGCCCGGTGTTCCCCCCCGCTCGCCCTCCCCGTGACACCCGACGG
CATTGGCTCCCCCGCCCGAAAAAAAAGGGCGGTGGAACTCATCCTGGAAT
TCGAAAATTTCATATCGACCAACCGTATCCGGCTGGTCGACCTCTTTGAG
AGGGTCGACAAAGACAAGGGAGGAACCGTGGACGGCGAAGAGCTCAGGGA
GTTTTTGAAGCTTGGGAGGAAAACGTGA back to topCoding sequence (CDS) from alignment at Scaffold_420:419621..421198- >EsuBft119_9a-0001 ID=EsuBft119_9a-0001|Name=EsuBft119_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=492bp|location=Sequence derived from alignment at Scaffold_420:419621..421198- (Ectocarpus subulatus male Bft15b)
ATGCTCAAGGCTCACGGGCTATCACCCGACGACTGGCTGCAGGAGCTCCT
GTCCAGAAGGAAACAGGATCGCTTGACGACGTTCGAAATGGGCGAGAGTA
TCCGTGGCTATAACAGGGCGAAGCCCGCGTGGGTCAGGTCCCACAAGCAT
TGGCTACGCGAGTTCATGATCTCGGAGAAGGACCTTCGCTGGTGCCAGCG
ATTCGTGGACCCCGACGGGCTCATTGCGGTCGTGTCTTTCTCGTACGGGT
GCCGGAACACCGACATCGACGAGGAGGAGCTTTCAAACGCCGTTAGATCT
ACGCTCGACGGGAAGCCCCGCATGTCATTGGAAGAGAGCCGGGCGGTGGA
ACTCATCCTGGAATTCGAAAATTTCATATCGACCAACCGTATCCGGCTGG
TCGACCTCTTTGAGAGGGTCGACAAAGACAAGGGAGGAACCGTGGACGGC
GAAGAGCTCAGGGAGTTTTTGAAGCTTGGGAGGAAAACGTGA back to top
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