Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | EsuBft119_2 |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 2 |
Length | 50 |
Hectar predicted targeting category | other localisation |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft119_2a-0001 ID=EsuBft119_2a-0001|Name=EsuBft119_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=509bp|location=Sequence derived from alignment at Scaffold_420:253201..253877- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CAACAACGCCACCAACCACCATGTCTAGCTTCTTCGACGACAACTGCCCT TCCAAGAGAGCCAAGCCCGGACAGACCTCTCACGGTGCCGCTTCCCCCGA CGGCTTCAAGATTGTCGGTGAGGTTTTCCCTGGTCGGCTGTGCCCGGAGG ACAACAAGGACCTCCTGAAACGCTACACCAACGGTCGCCTCTTCGTCGTC TGCCTCGGCAACATCAAGGACGACCCCTCCACCTGCCAGTTCACCGCGAA CTGTTTCGGAAAAGACCGTGTCAAGCCCGGCGAGGAGTCGAAGATCGCCT GCATCTTCTGCACGGTGCTGGTCGAGCACACCCTCTCGCTCGGCAGGAGC ACCGGCCGCACGGATCCCGTGACGGGAAAACTGATCTACCAGAACGTCCA CGTCTACTTTGACACCTGCTGGGGAAAGAAGAGAGCCTTCGACCCCAAGA CGAACAAGGAAGTGCTGTCTCACTTCACAACCGCCCCCGCTTCCCTCGTC GGGGTATGA back to topprotein sequence of EsuBft119_2a-0001 >EsuBft119_2 ID=EsuBft119_2|Name=EsuBft119_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=162bp
MSSFFDDNCPSKRAKPGQTSHGAASPDGFKIVGEVFPGRLCPEDNKDLLK RYTNGRLFVVCLGNIKDDPSTCQFTANCFGKDRVKPGEESKIACIFCTVL VEHTLSLGRSTGRTDPVTGKLIYQNVHVYFDTCWGKKRAFDPKTNKEVLS HFTTAPASLVGV back to topmRNA from alignment at Scaffold_420:253201..253877- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft119_2a-0001 ID=EsuBft119_2a-0001|Name=EsuBft119_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=677bp|location=Sequence derived from alignment at Scaffold_420:253201..253877- (Ectocarpus subulatus male Bft15b) CAACAACGCCACCAACCACCATGTCTAGCTTCTTCGACGACAACTGCCCT
TCCAAGAGAGCCAAGCCCGGACAGACCTCTCACGGTGCCGCTTCCCCCGA
CGGCTTCAAGATTGTCGGTGAGGTTTTCCCTGGTCGGCTGTGCCCGGAGG
ACAACAAGGACCTCCTGAAACGCTACACCAACGGTCGCCTCTTCGTCGTC
TGCCTCGGCAACATCAAGGACGACCCCTCCACCTGCCAGTTCACCGCGAA
CTGTTTCGGAAAAGACCGTGTCAAGCCCGGCGAGGAGTCGAAGATCGCCT
GCATCTTCTGCACGGTGCTGGTCGAGCACACCCTCTCGCTCGGCAGGAGC
ACCGGCCGCACGGATCCCGTGACGGGAAAACTGAGTGAGTCTGTCTGTTT
TTTTTTTGGATGCCCGCGTTGCCATCGTCTTAGTATACCGCGTCAAATAA
ACCTAGTTTTTGCGTGACTCTGCTGTGCTAGACTACTCATCTTTTACCAT
GTCCCGTGTGTTCTCTTCTTCTTGCCCTTTCCCCGTTCACTTTCCTCATC
AGTCTACCAGAACGTCCACGTCTACTTTGACACCTGCTGGGGAAAGAAGA
GAGCCTTCGACCCCAAGACGAACAAGGAAGTGCTGTCTCACTTCACAACC
GCCCCCGCTTCCCTCGTCGGGGTATGA back to topCoding sequence (CDS) from alignment at Scaffold_420:253201..253877- >EsuBft119_2a-0001 ID=EsuBft119_2a-0001|Name=EsuBft119_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=489bp|location=Sequence derived from alignment at Scaffold_420:253201..253877- (Ectocarpus subulatus male Bft15b) ATGTCTAGCTTCTTCGACGACAACTGCCCTTCCAAGAGAGCCAAGCCCGG ACAGACCTCTCACGGTGCCGCTTCCCCCGACGGCTTCAAGATTGTCGGTG AGGTTTTCCCTGGTCGGCTGTGCCCGGAGGACAACAAGGACCTCCTGAAA CGCTACACCAACGGTCGCCTCTTCGTCGTCTGCCTCGGCAACATCAAGGA CGACCCCTCCACCTGCCAGTTCACCGCGAACTGTTTCGGAAAAGACCGTG TCAAGCCCGGCGAGGAGTCGAAGATCGCCTGCATCTTCTGCACGGTGCTG GTCGAGCACACCCTCTCGCTCGGCAGGAGCACCGGCCGCACGGATCCCGT GACGGGAAAACTGATCTACCAGAACGTCCACGTCTACTTTGACACCTGCT GGGGAAAGAAGAGAGCCTTCGACCCCAAGACGAACAAGGAAGTGCTGTCT CACTTCACAACCGCCCCCGCTTCCCTCGTCGGGGTATGA back to top
|