EsuBft1574_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft1574_4a-0001
Unique NameEsuBft1574_4a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_420contigScaffold_420:107392..112816 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog67593.Physo132874
ProteomeIdEsuBft1574_4
Protein domainsPF14227
Protein domainsIPR013103
Protein domainsIPR001584
Protein domainsPTHR11439
Protein domainsCoil
Protein domainsIPR012337
Protein domainsSSF56672
Protein domainsIPR001878
Ownerapollo_admin@sb-roscoff.fr
Noteretrovirus-related pol polyprotein from transposon tnt 1-94 os:nicotiana tabacum pe:2 sv:1 [Automatic annotation]
Nb exon1
Max annot lvl4776|Peronosporales
Length5425
Hectar predicted targeting categoryother localisation
Evalue2.88e-95
EggNOG OGsCOG2801@1|root,KOG0017@2759|Eukaryota,3QH4V@4776|Peronosporales
Date last modified2016-06-14
Date creation2016-06-14
DescriptionGAG-pre-integrase domain
COG categoryL
Cross References
External references for this mRNA
DatabaseAccession
GO0003676
GO0003824
GO0015074
GO0044424
GO0008270
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft1574_4aEsuBft1574_4aEctocarpus subulatus male Bft15bgeneScaffold_420 107392..112816 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1574_4a-0001-exonEsuBft1574_4a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_420 107392..112816 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1574_4a-0001-cdsEsuBft1574_4a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_420 107392..112761 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1574_4a-0001-exonagat-five_prime_utr-3233Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_420 112762..112816 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft1574_4a-0001EsuBft1574_4Ectocarpus subulatus male Bft15bpolypeptideScaffold_420 107392..112761 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1574_4a-0001 ID=EsuBft1574_4a-0001|Name=EsuBft1574_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5425bp|location=Sequence derived from alignment at Scaffold_420:107392..112816- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GTGGCGTAGGCCGCAAACACTCTAGAGTTTGCCCCTCGAGGGAAGCCACA
TCGGGATGAGCTCTGCTGGAGACGAAGAGCGCGCTGCTGCGAGCGGAGAA
CAGATCCGCCCGCCAGTGCAGGAGGGCCGCGACGCGGAGCTTGCAAGTTT
GCAACGGCAGATTTCGCAATTGGCGGCCCTGGTGGAGGAGTCGGTGAAGA
AGAAGGAGCCTGGCAGCGTCGTGGCGGATGCAGCCAGTAGGGGTGGCTGG
GTTGCTGCCCCCAGAGGCCAACGAGAAGAGCCCACGCTGCCGCTCGGCGG
TGGCGGGGGATTTCTCCAGCAGCAAACGAGAGATAGTGGGCAAGGACCAC
GGTCGCTGCTGGAAGGCGGCTGGGCCAGCAGATCGGGAGCGAACCCTGTT
GGACCAGCCGGAGTGGGCCCGGGCATAGGACCGGACTACGGGGAAGCGAG
GGGGTTAAACCCCCCAGGTGAGATACCCGTGATTCGAGGGAATGGAGAAT
ACCTCGACGGCTACAGCAGTAGCCACCAGAAAAGGGTGACGGTCAATGCC
CCGCTTCTAGACGGGAAAAGCCGTAGCCACGGGTTTGATTCGTGGCGCAA
GTCGTTCATCCAAGCTGCGAAGACCATCGACTTGGACGGGCAGTTTATAG
GAGATGCAGAGAGCAGTATCCCCGTGGGCGACCCAAACTTGCCGACTTCC
GAACTGCTCCGTAGGGGGTACACGAGAGCAGAAGTCCAACGGGGGCTTCA
GGCGTTCCACTTTATCACTACTGCTGTGGTAAAAGAAGCTGACAAAGCAA
TTATCAGCAACTGTACGTCAGCGAAAGAGGTCCTTGCGGAATTGGAAAAG
GTCTACGATCCGGAGTCACAGGGGTCAAAACAGGCCTTGATGCGGAAGAT
GTTCGACTTTGCAATCCCCACACACAGCAACAGCAACCCCATCGAGCACC
TCTACTCTTTCGAGCTGCTGTATGCCCGCCTGAGCGAAAAGGGGCTCAAT
GCTGAACAACCCTTCGTTCTCGCCCACTTCGTTGGTTCCCTCCCACCCGA
GTACCAACAAGCGAAGTTCCTGTTGGAGACAGCAACGGCGCTGGATAGGG
CCGAGATCGTCAGGATCGTGAGCACGGTGCACGCGAGCCTCCCGGAGGGA
AGGAAGGCCTCGAAGGGCCAGCGTAGGGCGGAGCATGCTCTCCTCGCGAG
TGACGGTGGCGGCGGGGGAGGAGCGCCGGGCCGCGGCAACAGCGGCCGCC
GCAAGGGTGGCGGCGGCGGCGGCGGCAACCAGAAGGGGAGAGGGGGTGGC
GCGAAGGCTGGAGGCGGCAGCGGAGGCGGCGACGACGATGCGGGTAGCAT
GCGCGGTCGCTGTTTCCGGTGCGGTAAGAAGGGCCACCAGGTGGCCAACT
GCCCCGAGAGCAAGCCCGTGCGATGTGAGACATGCAAGGGCTACGGCCAC
GACAAGAGCAAGTGCCCGACCGAAGAGGCGGTGCTCGTGGTGGAAGTGCC
GGCGGGGAGGGCGTCTGCGGACGCCACAGCACTGGACGTGGCAGAAGAAG
CGCTGGTGGTCGGTGACATCTCAGGCGAGTGTCACAAAGTCGTTGGTCGA
GGGGGTGTAGAGCAGGCTAGGCGGGGTAGGTATGTTGCCGATACCGGCGC
TACCACCCACATGTTCGCGAACTCAGATGGGTTCGTTCGTTACGAAGAGT
GTGATCGACGTGTGCGCGTCGCCGCCGGAGAAACCTTCCCTATCGTAGGG
TATGGCGACGTGACGGTAACCCTTAGCTCGCGCGACGGTACAACCGACCT
GTTGTTGAAACGGGTTGCACACGTCCCCCGACTAGACTACAACCTAGTAT
CTCTCACTTCCCTCTTCGACGACGGGTTCGAAACCAAAACCCTCAACAAA
CACGAGTTGGAGTTGGAGAGAGGGGGGGGGGAGGTGGTGTACTTCCCCCG
ATGCGGTAACCTGTACGTCCAAAACGGTTTCCGCACACACACCGAACATG
CCTGTGCCGCAATTGCTCCTGGCAACGCGAAAGCGCCCAGCACCCCCGTT
GACATCAACGATTTCCACTGCGCGCACGGCCACTCCCACGAGGTGCTGCT
GAGGACCACGGCGAAGCAGCAAGGGACGACGCTGGTGGGCGAGCTCCGGG
AGTGCCTGGGGTGCTCGACGGCGAAGGGGCTTTCCAAGCCCATCCCCAAC
AAAACGTCGACCCGAGCAGCTAAGAAACTGCAGCGAGTTTTCGTGGATTT
GAGTGGAAAAGCTAGGGTGCAGAGCTTGGGGGGAAAGTGGTACACTCTCA
TTGTCAAGGATGATTACACAAGGTGGAACCGTGTCTATTTCCTGAAGCAC
AAATCAGACGCAGCTGAGGCATTCGAGAGATACCTTGCCGAAAACCGGGC
AAACGGTGCCCCGTCCGATGTCATGGTCGTGAGATCTGACAACGGAGGAG
AGTTCTTTGAGGGAGAGTTCGGCAGGGTGTGCCGGAAGTACTGCATCAAA
CAGGAGTTCACCCCCGCGCACAGCCCAGAATACAACGGTGTAGCTGAGAG
AGCACTGGGTCTGATCAAGGATGCAGCACTAGCCGCCCGTATCCAAGCGC
CAACTCTTTACCCCGGAGCACCGAACTACCCATCCCTTTGGGCCGAGGCC
ATAGCTTGGTCATGCAACGCCCTGAACTGCACCTCCACCACATCCAACCC
AGAGAAGAAGTCGCCGTACGAGATGTGGCACGGGCACCCTCCCCCGCCGG
GGGCGACGTACCCGTTCCTCAAACCTGCCGTATACAAGGTCAAGCGCACA
CACAAGTCCGAGCCAAAAGCCCAAAAGTGTTTTTACCTCGGCCCGGGAAT
CAACACCAACCGTGATTGCGTGCGCATCTTGAACGAAAAACGCCGAGCGA
TCACAACTCGCAACTTCACCTGGCAATCCGTGCCCGCCGCCCCCGCCGCC
CTGCCCCAGTCGCTGCCTCCCATCGCAGAGGAGGAAGAGGAATTCGCGAC
TGAGGAGGACGAGGTTGGGGAGGGCGCGTCGAACCAAGGTGGAGGGAGGG
CGGAGAGAGAACCTGTGGATGGAGGACCAGGTTTCAACCTTGGCACGACG
GCAGCCCCAGGGCCCGCGGGGCCGCCCGCGCGCGCAGCGCCGGCGGCACC
GCCGGCCGCGCCCCAGGAGTCGGGCGCGGGCGACGCTGGCGATGGCGCCC
CCTCGAGCAGGGAGGGCGCGAGCGTCGCCCCATCTACCACGTCGACCGGC
ACGGCCGATGTGGGCGGCGGCGAGGACGACCGCCGCAGCAGCAGCAGCCG
CGGTAGCGGCGGCAGCGGCGGCAGCGGCGGCGACAGCAGTAGCCGCGGTA
GCGGCGGCAGTGGCAGCGACAGCAGCAGCGGTGGCAGCAGCGTCGATGAC
GGCGGCAGCGACAGCAGCAGTGGCAGCGACAGCGAGACGGATCTCCCGGC
GCTCTGTGGGCCAGAGGCCCGGCGGCTCGCCCGCTTCGACAAGCCGGCGG
AACTCACCAGCCGCCGCACTAGGGAGAACCCTCGCCGAAATCCGAGGTAC
GAGTCGCCCCCGTCGCCGCCCACATCGGCCCCGTCGCCGACAAGTGCCGA
AGCCCTGCTCGCCTCGGTGGCGAGCCTGCCCGACAGCAGCACGGAGGAGT
TCACCCGCTGGATGCTCTCGGCAGTACTTCACGTGGCGGAGGGGCTAGAG
GCGAGGGTGGTGCGAGAGTTGCTGTCCGAGCGCGCGCAGGAGGCCCACGC
TGCGCGCCAAGAGGCGGAGGATTTCCTGCTGGGTACGGTGGACCTCATGC
TCAACTCGCCAGACGCCTTCGAGACGGCTCTGGCGTCCCACGAGCTAAGT
GAATCCCCCATAGGCAAGCGTCCGAGTGATGTAGAAGCCCCACCCATGAC
TGTAGCCGGCGTTGCCAAGTCTGTTTACCGAGAGGGGTGGGAACAGGCCA
TGAGGGAAGAGTTTGAAGGGCACTTGGGCACGGGGACGTTTTCATTCGTA
GACGGTGCGCCAGAGGGGCGCAGGCCTGTGAGCTCAAAGTGGTGTTTTAG
TTGGAAGACCAACAAGGAAGGGAAGATAGACACGTTCAAAGCGCGTCTGG
TTGCTAGGGGGTTTTCGCAAATCCCGAACGTCGATTATTTCCATTCGTCT
TCCCCTTGCCCCTCATCCGCATCCATTAAGCTGATGCTTGCGGTAGCGAA
CGAGAAGGGCATGAACCTCAATCACTGGGATGTGAAGCAGGCGTATACAC
ACGCTACGCTAGACGAGGAGGTTTTTCTGAAGCTCCCCGCTGGGTGCGGG
GACAAGTCGCATAAGATTGCTAAGGCTGAGCGTGCGATTTATGGTCTGAA
GCAGAGCGGTAGGCAGTGGGGGTACCACGCTGCTGATACGCTAGTCGAGA
ACGGGTTCGAGCAATGCAAGGCGGACCCGTGTGTTTTCCGCAAGATGGTA
GACGAAGTCGTGGTGATGATTATCGTGATTTATGTGGATGACATTTTGGT
GGCTGGGTCTGACGAGGATTGCGAGGAGTTGCTTGCTTCTCTCAACAAGA
AATTTCCCACCAAAAACCTTGGAGAGTGTCAATGGTTTGATGGGTGTGCC
ATCGAGAGAGATGTAGAGGCTGGGACTCTTAGAATCTCCCAAACCGCGTA
TATCGACAGCATGGTTGAACGCTTCGATGTGAAATCAACTTCCCGCATCC
CCGCTACCCCTGGTGCCGATCTAGGGCCGAAGCGAGAGGATGAGGAAGGA
GGGGAGTGGCCGGTGAGGGAGGCCATCGGCAGCATGATGTGGGTGTCGAC
TTTCTCGCGTCCAGACGTCTCGTTCGCCGTGCGTGCGGTAGCGCGCCACG
CCCACGCCCCGGCGAAGCGGCACTGGGATGCCATACAGAAGATCCTCGGC
TACCTGAAAGGGACGAGGGACCTCGGCATCACCTACCAACGGGGATCGGG
GTTAGGGCTGGCCGTGTACGTAGACGCTAGCTACGCCGACACGGAGGATA
GGCGTTCGGTGTCAGGGTTGGCGACGACGGTTGGAGGTACCGTAGTCAGC
CATGGTAGCAAGACGCAGAGTATCGTGTCTTTGTCTTCAACGGAAGCCGA
GTACATTGCTGCCGGGGAGGGTGTCAAGGAGGCGTTGTTTGTGCGTGCTG
TGCTTTCGTTTGTCGCCCCAGAGACCAGTGGTAGCAGCATCAAGGTCCTT
GAGGACAACCAGGGGGCCATAGCGTTGGTGCAGAACCCCCTCAGCTCAGG
TCGCACGAAACACATCGACGTGAGGTATCATTTCATCCGAGGATTGTTTA
GGTCGGGGGATATTTCGGTCAAGTTTGTTCCGACAACGGAGCAACACGCG
GACCTCCTTACCAAGGCCCTTAGCAGGGTCAGTCTGCAGTACCACCGGCG
CAAGCTGATGAATTTGCCGGAGTAG
back to top

protein sequence of EsuBft1574_4a-0001

>EsuBft1574_4 ID=EsuBft1574_4|Name=EsuBft1574_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=1789bp
MSSAGDEERAAASGEQIRPPVQEGRDAELASLQRQISQLAALVEESVKKK
EPGSVVADAASRGGWVAAPRGQREEPTLPLGGGGGFLQQQTRDSGQGPRS
LLEGGWASRSGANPVGPAGVGPGIGPDYGEARGLNPPGEIPVIRGNGEYL
DGYSSSHQKRVTVNAPLLDGKSRSHGFDSWRKSFIQAAKTIDLDGQFIGD
AESSIPVGDPNLPTSELLRRGYTRAEVQRGLQAFHFITTAVVKEADKAII
SNCTSAKEVLAELEKVYDPESQGSKQALMRKMFDFAIPTHSNSNPIEHLY
SFELLYARLSEKGLNAEQPFVLAHFVGSLPPEYQQAKFLLETATALDRAE
IVRIVSTVHASLPEGRKASKGQRRAEHALLASDGGGGGGAPGRGNSGRRK
GGGGGGGNQKGRGGGAKAGGGSGGGDDDAGSMRGRCFRCGKKGHQVANCP
ESKPVRCETCKGYGHDKSKCPTEEAVLVVEVPAGRASADATALDVAEEAL
VVGDISGECHKVVGRGGVEQARRGRYVADTGATTHMFANSDGFVRYEECD
RRVRVAAGETFPIVGYGDVTVTLSSRDGTTDLLLKRVAHVPRLDYNLVSL
TSLFDDGFETKTLNKHELELERGGGEVVYFPRCGNLYVQNGFRTHTEHAC
AAIAPGNAKAPSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELREC
LGCSTAKGLSKPIPNKTSTRAAKKLQRVFVDLSGKARVQSLGGKWYTLIV
KDDYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMVVRSDNGGEF
FEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPT
LYPGAPNYPSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGA
TYPFLKPAVYKVKRTHKSEPKAQKCFYLGPGINTNRDCVRILNEKRRAIT
TRNFTWQSVPAAPAALPQSLPPIAEEEEEFATEEDEVGEGASNQGGGRAE
REPVDGGPGFNLGTTAAPGPAGPPARAAPAAPPAAPQESGAGDAGDGAPS
SREGASVAPSTTSTGTADVGGGEDDRRSSSSRGSGGSGGSGGDSSSRGSG
GSGSDSSSGGSSVDDGGSDSSSGSDSETDLPALCGPEARRLARFDKPAEL
TSRRTRENPRRNPRYESPPSPPTSAPSPTSAEALLASVASLPDSSTEEFT
RWMLSAVLHVAEGLEARVVRELLSERAQEAHAARQEAEDFLLGTVDLMLN
SPDAFETALASHELSESPIGKRPSDVEAPPMTVAGVAKSVYREGWEQAMR
EEFEGHLGTGTFSFVDGAPEGRRPVSSKWCFSWKTNKEGKIDTFKARLVA
RGFSQIPNVDYFHSSSPCPSSASIKLMLAVANEKGMNLNHWDVKQAYTHA
TLDEEVFLKLPAGCGDKSHKIAKAERAIYGLKQSGRQWGYHAADTLVENG
FEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDCEELLASLNKKF
PTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPA
TPGADLGPKREDEEGGEWPVREAIGSMMWVSTFSRPDVSFAVRAVARHAH
APAKRHWDAIQKILGYLKGTRDLGITYQRGSGLGLAVYVDASYADTEDRR
SVSGLATTVGGTVVSHGSKTQSIVSLSSTEAEYIAAGEGVKEALFVRAVL
SFVAPETSGSSIKVLEDNQGAIALVQNPLSSGRTKHIDVRYHFIRGLFRS
GDISVKFVPTTEQHADLLTKALSRVSLQYHRRKLMNLPE
back to top

mRNA from alignment at Scaffold_420:107392..112816-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1574_4a-0001 ID=EsuBft1574_4a-0001|Name=EsuBft1574_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5425bp|location=Sequence derived from alignment at Scaffold_420:107392..112816- (Ectocarpus subulatus male Bft15b)
GTGGCGTAGGCCGCAAACACTCTAGAGTTTGCCCCTCGAGGGAAGCCACA TCGGGATGAGCTCTGCTGGAGACGAAGAGCGCGCTGCTGCGAGCGGAGAA CAGATCCGCCCGCCAGTGCAGGAGGGCCGCGACGCGGAGCTTGCAAGTTT GCAACGGCAGATTTCGCAATTGGCGGCCCTGGTGGAGGAGTCGGTGAAGA AGAAGGAGCCTGGCAGCGTCGTGGCGGATGCAGCCAGTAGGGGTGGCTGG GTTGCTGCCCCCAGAGGCCAACGAGAAGAGCCCACGCTGCCGCTCGGCGG TGGCGGGGGATTTCTCCAGCAGCAAACGAGAGATAGTGGGCAAGGACCAC GGTCGCTGCTGGAAGGCGGCTGGGCCAGCAGATCGGGAGCGAACCCTGTT GGACCAGCCGGAGTGGGCCCGGGCATAGGACCGGACTACGGGGAAGCGAG GGGGTTAAACCCCCCAGGTGAGATACCCGTGATTCGAGGGAATGGAGAAT ACCTCGACGGCTACAGCAGTAGCCACCAGAAAAGGGTGACGGTCAATGCC CCGCTTCTAGACGGGAAAAGCCGTAGCCACGGGTTTGATTCGTGGCGCAA GTCGTTCATCCAAGCTGCGAAGACCATCGACTTGGACGGGCAGTTTATAG GAGATGCAGAGAGCAGTATCCCCGTGGGCGACCCAAACTTGCCGACTTCC GAACTGCTCCGTAGGGGGTACACGAGAGCAGAAGTCCAACGGGGGCTTCA GGCGTTCCACTTTATCACTACTGCTGTGGTAAAAGAAGCTGACAAAGCAA TTATCAGCAACTGTACGTCAGCGAAAGAGGTCCTTGCGGAATTGGAAAAG GTCTACGATCCGGAGTCACAGGGGTCAAAACAGGCCTTGATGCGGAAGAT GTTCGACTTTGCAATCCCCACACACAGCAACAGCAACCCCATCGAGCACC TCTACTCTTTCGAGCTGCTGTATGCCCGCCTGAGCGAAAAGGGGCTCAAT GCTGAACAACCCTTCGTTCTCGCCCACTTCGTTGGTTCCCTCCCACCCGA GTACCAACAAGCGAAGTTCCTGTTGGAGACAGCAACGGCGCTGGATAGGG CCGAGATCGTCAGGATCGTGAGCACGGTGCACGCGAGCCTCCCGGAGGGA AGGAAGGCCTCGAAGGGCCAGCGTAGGGCGGAGCATGCTCTCCTCGCGAG TGACGGTGGCGGCGGGGGAGGAGCGCCGGGCCGCGGCAACAGCGGCCGCC GCAAGGGTGGCGGCGGCGGCGGCGGCAACCAGAAGGGGAGAGGGGGTGGC GCGAAGGCTGGAGGCGGCAGCGGAGGCGGCGACGACGATGCGGGTAGCAT GCGCGGTCGCTGTTTCCGGTGCGGTAAGAAGGGCCACCAGGTGGCCAACT GCCCCGAGAGCAAGCCCGTGCGATGTGAGACATGCAAGGGCTACGGCCAC GACAAGAGCAAGTGCCCGACCGAAGAGGCGGTGCTCGTGGTGGAAGTGCC GGCGGGGAGGGCGTCTGCGGACGCCACAGCACTGGACGTGGCAGAAGAAG CGCTGGTGGTCGGTGACATCTCAGGCGAGTGTCACAAAGTCGTTGGTCGA GGGGGTGTAGAGCAGGCTAGGCGGGGTAGGTATGTTGCCGATACCGGCGC TACCACCCACATGTTCGCGAACTCAGATGGGTTCGTTCGTTACGAAGAGT GTGATCGACGTGTGCGCGTCGCCGCCGGAGAAACCTTCCCTATCGTAGGG TATGGCGACGTGACGGTAACCCTTAGCTCGCGCGACGGTACAACCGACCT GTTGTTGAAACGGGTTGCACACGTCCCCCGACTAGACTACAACCTAGTAT CTCTCACTTCCCTCTTCGACGACGGGTTCGAAACCAAAACCCTCAACAAA CACGAGTTGGAGTTGGAGAGAGGGGGGGGGGAGGTGGTGTACTTCCCCCG ATGCGGTAACCTGTACGTCCAAAACGGTTTCCGCACACACACCGAACATG CCTGTGCCGCAATTGCTCCTGGCAACGCGAAAGCGCCCAGCACCCCCGTT GACATCAACGATTTCCACTGCGCGCACGGCCACTCCCACGAGGTGCTGCT GAGGACCACGGCGAAGCAGCAAGGGACGACGCTGGTGGGCGAGCTCCGGG AGTGCCTGGGGTGCTCGACGGCGAAGGGGCTTTCCAAGCCCATCCCCAAC AAAACGTCGACCCGAGCAGCTAAGAAACTGCAGCGAGTTTTCGTGGATTT GAGTGGAAAAGCTAGGGTGCAGAGCTTGGGGGGAAAGTGGTACACTCTCA TTGTCAAGGATGATTACACAAGGTGGAACCGTGTCTATTTCCTGAAGCAC AAATCAGACGCAGCTGAGGCATTCGAGAGATACCTTGCCGAAAACCGGGC AAACGGTGCCCCGTCCGATGTCATGGTCGTGAGATCTGACAACGGAGGAG AGTTCTTTGAGGGAGAGTTCGGCAGGGTGTGCCGGAAGTACTGCATCAAA CAGGAGTTCACCCCCGCGCACAGCCCAGAATACAACGGTGTAGCTGAGAG AGCACTGGGTCTGATCAAGGATGCAGCACTAGCCGCCCGTATCCAAGCGC CAACTCTTTACCCCGGAGCACCGAACTACCCATCCCTTTGGGCCGAGGCC ATAGCTTGGTCATGCAACGCCCTGAACTGCACCTCCACCACATCCAACCC AGAGAAGAAGTCGCCGTACGAGATGTGGCACGGGCACCCTCCCCCGCCGG GGGCGACGTACCCGTTCCTCAAACCTGCCGTATACAAGGTCAAGCGCACA CACAAGTCCGAGCCAAAAGCCCAAAAGTGTTTTTACCTCGGCCCGGGAAT CAACACCAACCGTGATTGCGTGCGCATCTTGAACGAAAAACGCCGAGCGA TCACAACTCGCAACTTCACCTGGCAATCCGTGCCCGCCGCCCCCGCCGCC CTGCCCCAGTCGCTGCCTCCCATCGCAGAGGAGGAAGAGGAATTCGCGAC TGAGGAGGACGAGGTTGGGGAGGGCGCGTCGAACCAAGGTGGAGGGAGGG CGGAGAGAGAACCTGTGGATGGAGGACCAGGTTTCAACCTTGGCACGACG GCAGCCCCAGGGCCCGCGGGGCCGCCCGCGCGCGCAGCGCCGGCGGCACC GCCGGCCGCGCCCCAGGAGTCGGGCGCGGGCGACGCTGGCGATGGCGCCC CCTCGAGCAGGGAGGGCGCGAGCGTCGCCCCATCTACCACGTCGACCGGC ACGGCCGATGTGGGCGGCGGCGAGGACGACCGCCGCAGCAGCAGCAGCCG CGGTAGCGGCGGCAGCGGCGGCAGCGGCGGCGACAGCAGTAGCCGCGGTA GCGGCGGCAGTGGCAGCGACAGCAGCAGCGGTGGCAGCAGCGTCGATGAC GGCGGCAGCGACAGCAGCAGTGGCAGCGACAGCGAGACGGATCTCCCGGC GCTCTGTGGGCCAGAGGCCCGGCGGCTCGCCCGCTTCGACAAGCCGGCGG AACTCACCAGCCGCCGCACTAGGGAGAACCCTCGCCGAAATCCGAGGTAC GAGTCGCCCCCGTCGCCGCCCACATCGGCCCCGTCGCCGACAAGTGCCGA AGCCCTGCTCGCCTCGGTGGCGAGCCTGCCCGACAGCAGCACGGAGGAGT TCACCCGCTGGATGCTCTCGGCAGTACTTCACGTGGCGGAGGGGCTAGAG GCGAGGGTGGTGCGAGAGTTGCTGTCCGAGCGCGCGCAGGAGGCCCACGC TGCGCGCCAAGAGGCGGAGGATTTCCTGCTGGGTACGGTGGACCTCATGC TCAACTCGCCAGACGCCTTCGAGACGGCTCTGGCGTCCCACGAGCTAAGT GAATCCCCCATAGGCAAGCGTCCGAGTGATGTAGAAGCCCCACCCATGAC TGTAGCCGGCGTTGCCAAGTCTGTTTACCGAGAGGGGTGGGAACAGGCCA TGAGGGAAGAGTTTGAAGGGCACTTGGGCACGGGGACGTTTTCATTCGTA GACGGTGCGCCAGAGGGGCGCAGGCCTGTGAGCTCAAAGTGGTGTTTTAG TTGGAAGACCAACAAGGAAGGGAAGATAGACACGTTCAAAGCGCGTCTGG TTGCTAGGGGGTTTTCGCAAATCCCGAACGTCGATTATTTCCATTCGTCT TCCCCTTGCCCCTCATCCGCATCCATTAAGCTGATGCTTGCGGTAGCGAA CGAGAAGGGCATGAACCTCAATCACTGGGATGTGAAGCAGGCGTATACAC ACGCTACGCTAGACGAGGAGGTTTTTCTGAAGCTCCCCGCTGGGTGCGGG GACAAGTCGCATAAGATTGCTAAGGCTGAGCGTGCGATTTATGGTCTGAA GCAGAGCGGTAGGCAGTGGGGGTACCACGCTGCTGATACGCTAGTCGAGA ACGGGTTCGAGCAATGCAAGGCGGACCCGTGTGTTTTCCGCAAGATGGTA GACGAAGTCGTGGTGATGATTATCGTGATTTATGTGGATGACATTTTGGT GGCTGGGTCTGACGAGGATTGCGAGGAGTTGCTTGCTTCTCTCAACAAGA AATTTCCCACCAAAAACCTTGGAGAGTGTCAATGGTTTGATGGGTGTGCC ATCGAGAGAGATGTAGAGGCTGGGACTCTTAGAATCTCCCAAACCGCGTA TATCGACAGCATGGTTGAACGCTTCGATGTGAAATCAACTTCCCGCATCC CCGCTACCCCTGGTGCCGATCTAGGGCCGAAGCGAGAGGATGAGGAAGGA GGGGAGTGGCCGGTGAGGGAGGCCATCGGCAGCATGATGTGGGTGTCGAC TTTCTCGCGTCCAGACGTCTCGTTCGCCGTGCGTGCGGTAGCGCGCCACG CCCACGCCCCGGCGAAGCGGCACTGGGATGCCATACAGAAGATCCTCGGC TACCTGAAAGGGACGAGGGACCTCGGCATCACCTACCAACGGGGATCGGG GTTAGGGCTGGCCGTGTACGTAGACGCTAGCTACGCCGACACGGAGGATA GGCGTTCGGTGTCAGGGTTGGCGACGACGGTTGGAGGTACCGTAGTCAGC CATGGTAGCAAGACGCAGAGTATCGTGTCTTTGTCTTCAACGGAAGCCGA GTACATTGCTGCCGGGGAGGGTGTCAAGGAGGCGTTGTTTGTGCGTGCTG TGCTTTCGTTTGTCGCCCCAGAGACCAGTGGTAGCAGCATCAAGGTCCTT GAGGACAACCAGGGGGCCATAGCGTTGGTGCAGAACCCCCTCAGCTCAGG TCGCACGAAACACATCGACGTGAGGTATCATTTCATCCGAGGATTGTTTA GGTCGGGGGATATTTCGGTCAAGTTTGTTCCGACAACGGAGCAACACGCG GACCTCCTTACCAAGGCCCTTAGCAGGGTCAGTCTGCAGTACCACCGGCG CAAGCTGATGAATTTGCCGGAGTAG
back to top

Coding sequence (CDS) from alignment at Scaffold_420:107392..112816-

>EsuBft1574_4a-0001 ID=EsuBft1574_4a-0001|Name=EsuBft1574_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=5370bp|location=Sequence derived from alignment at Scaffold_420:107392..112816- (Ectocarpus subulatus male Bft15b)
ATGAGCTCTGCTGGAGACGAAGAGCGCGCTGCTGCGAGCGGAGAACAGAT
CCGCCCGCCAGTGCAGGAGGGCCGCGACGCGGAGCTTGCAAGTTTGCAAC
GGCAGATTTCGCAATTGGCGGCCCTGGTGGAGGAGTCGGTGAAGAAGAAG
GAGCCTGGCAGCGTCGTGGCGGATGCAGCCAGTAGGGGTGGCTGGGTTGC
TGCCCCCAGAGGCCAACGAGAAGAGCCCACGCTGCCGCTCGGCGGTGGCG
GGGGATTTCTCCAGCAGCAAACGAGAGATAGTGGGCAAGGACCACGGTCG
CTGCTGGAAGGCGGCTGGGCCAGCAGATCGGGAGCGAACCCTGTTGGACC
AGCCGGAGTGGGCCCGGGCATAGGACCGGACTACGGGGAAGCGAGGGGGT
TAAACCCCCCAGGTGAGATACCCGTGATTCGAGGGAATGGAGAATACCTC
GACGGCTACAGCAGTAGCCACCAGAAAAGGGTGACGGTCAATGCCCCGCT
TCTAGACGGGAAAAGCCGTAGCCACGGGTTTGATTCGTGGCGCAAGTCGT
TCATCCAAGCTGCGAAGACCATCGACTTGGACGGGCAGTTTATAGGAGAT
GCAGAGAGCAGTATCCCCGTGGGCGACCCAAACTTGCCGACTTCCGAACT
GCTCCGTAGGGGGTACACGAGAGCAGAAGTCCAACGGGGGCTTCAGGCGT
TCCACTTTATCACTACTGCTGTGGTAAAAGAAGCTGACAAAGCAATTATC
AGCAACTGTACGTCAGCGAAAGAGGTCCTTGCGGAATTGGAAAAGGTCTA
CGATCCGGAGTCACAGGGGTCAAAACAGGCCTTGATGCGGAAGATGTTCG
ACTTTGCAATCCCCACACACAGCAACAGCAACCCCATCGAGCACCTCTAC
TCTTTCGAGCTGCTGTATGCCCGCCTGAGCGAAAAGGGGCTCAATGCTGA
ACAACCCTTCGTTCTCGCCCACTTCGTTGGTTCCCTCCCACCCGAGTACC
AACAAGCGAAGTTCCTGTTGGAGACAGCAACGGCGCTGGATAGGGCCGAG
ATCGTCAGGATCGTGAGCACGGTGCACGCGAGCCTCCCGGAGGGAAGGAA
GGCCTCGAAGGGCCAGCGTAGGGCGGAGCATGCTCTCCTCGCGAGTGACG
GTGGCGGCGGGGGAGGAGCGCCGGGCCGCGGCAACAGCGGCCGCCGCAAG
GGTGGCGGCGGCGGCGGCGGCAACCAGAAGGGGAGAGGGGGTGGCGCGAA
GGCTGGAGGCGGCAGCGGAGGCGGCGACGACGATGCGGGTAGCATGCGCG
GTCGCTGTTTCCGGTGCGGTAAGAAGGGCCACCAGGTGGCCAACTGCCCC
GAGAGCAAGCCCGTGCGATGTGAGACATGCAAGGGCTACGGCCACGACAA
GAGCAAGTGCCCGACCGAAGAGGCGGTGCTCGTGGTGGAAGTGCCGGCGG
GGAGGGCGTCTGCGGACGCCACAGCACTGGACGTGGCAGAAGAAGCGCTG
GTGGTCGGTGACATCTCAGGCGAGTGTCACAAAGTCGTTGGTCGAGGGGG
TGTAGAGCAGGCTAGGCGGGGTAGGTATGTTGCCGATACCGGCGCTACCA
CCCACATGTTCGCGAACTCAGATGGGTTCGTTCGTTACGAAGAGTGTGAT
CGACGTGTGCGCGTCGCCGCCGGAGAAACCTTCCCTATCGTAGGGTATGG
CGACGTGACGGTAACCCTTAGCTCGCGCGACGGTACAACCGACCTGTTGT
TGAAACGGGTTGCACACGTCCCCCGACTAGACTACAACCTAGTATCTCTC
ACTTCCCTCTTCGACGACGGGTTCGAAACCAAAACCCTCAACAAACACGA
GTTGGAGTTGGAGAGAGGGGGGGGGGAGGTGGTGTACTTCCCCCGATGCG
GTAACCTGTACGTCCAAAACGGTTTCCGCACACACACCGAACATGCCTGT
GCCGCAATTGCTCCTGGCAACGCGAAAGCGCCCAGCACCCCCGTTGACAT
CAACGATTTCCACTGCGCGCACGGCCACTCCCACGAGGTGCTGCTGAGGA
CCACGGCGAAGCAGCAAGGGACGACGCTGGTGGGCGAGCTCCGGGAGTGC
CTGGGGTGCTCGACGGCGAAGGGGCTTTCCAAGCCCATCCCCAACAAAAC
GTCGACCCGAGCAGCTAAGAAACTGCAGCGAGTTTTCGTGGATTTGAGTG
GAAAAGCTAGGGTGCAGAGCTTGGGGGGAAAGTGGTACACTCTCATTGTC
AAGGATGATTACACAAGGTGGAACCGTGTCTATTTCCTGAAGCACAAATC
AGACGCAGCTGAGGCATTCGAGAGATACCTTGCCGAAAACCGGGCAAACG
GTGCCCCGTCCGATGTCATGGTCGTGAGATCTGACAACGGAGGAGAGTTC
TTTGAGGGAGAGTTCGGCAGGGTGTGCCGGAAGTACTGCATCAAACAGGA
GTTCACCCCCGCGCACAGCCCAGAATACAACGGTGTAGCTGAGAGAGCAC
TGGGTCTGATCAAGGATGCAGCACTAGCCGCCCGTATCCAAGCGCCAACT
CTTTACCCCGGAGCACCGAACTACCCATCCCTTTGGGCCGAGGCCATAGC
TTGGTCATGCAACGCCCTGAACTGCACCTCCACCACATCCAACCCAGAGA
AGAAGTCGCCGTACGAGATGTGGCACGGGCACCCTCCCCCGCCGGGGGCG
ACGTACCCGTTCCTCAAACCTGCCGTATACAAGGTCAAGCGCACACACAA
GTCCGAGCCAAAAGCCCAAAAGTGTTTTTACCTCGGCCCGGGAATCAACA
CCAACCGTGATTGCGTGCGCATCTTGAACGAAAAACGCCGAGCGATCACA
ACTCGCAACTTCACCTGGCAATCCGTGCCCGCCGCCCCCGCCGCCCTGCC
CCAGTCGCTGCCTCCCATCGCAGAGGAGGAAGAGGAATTCGCGACTGAGG
AGGACGAGGTTGGGGAGGGCGCGTCGAACCAAGGTGGAGGGAGGGCGGAG
AGAGAACCTGTGGATGGAGGACCAGGTTTCAACCTTGGCACGACGGCAGC
CCCAGGGCCCGCGGGGCCGCCCGCGCGCGCAGCGCCGGCGGCACCGCCGG
CCGCGCCCCAGGAGTCGGGCGCGGGCGACGCTGGCGATGGCGCCCCCTCG
AGCAGGGAGGGCGCGAGCGTCGCCCCATCTACCACGTCGACCGGCACGGC
CGATGTGGGCGGCGGCGAGGACGACCGCCGCAGCAGCAGCAGCCGCGGTA
GCGGCGGCAGCGGCGGCAGCGGCGGCGACAGCAGTAGCCGCGGTAGCGGC
GGCAGTGGCAGCGACAGCAGCAGCGGTGGCAGCAGCGTCGATGACGGCGG
CAGCGACAGCAGCAGTGGCAGCGACAGCGAGACGGATCTCCCGGCGCTCT
GTGGGCCAGAGGCCCGGCGGCTCGCCCGCTTCGACAAGCCGGCGGAACTC
ACCAGCCGCCGCACTAGGGAGAACCCTCGCCGAAATCCGAGGTACGAGTC
GCCCCCGTCGCCGCCCACATCGGCCCCGTCGCCGACAAGTGCCGAAGCCC
TGCTCGCCTCGGTGGCGAGCCTGCCCGACAGCAGCACGGAGGAGTTCACC
CGCTGGATGCTCTCGGCAGTACTTCACGTGGCGGAGGGGCTAGAGGCGAG
GGTGGTGCGAGAGTTGCTGTCCGAGCGCGCGCAGGAGGCCCACGCTGCGC
GCCAAGAGGCGGAGGATTTCCTGCTGGGTACGGTGGACCTCATGCTCAAC
TCGCCAGACGCCTTCGAGACGGCTCTGGCGTCCCACGAGCTAAGTGAATC
CCCCATAGGCAAGCGTCCGAGTGATGTAGAAGCCCCACCCATGACTGTAG
CCGGCGTTGCCAAGTCTGTTTACCGAGAGGGGTGGGAACAGGCCATGAGG
GAAGAGTTTGAAGGGCACTTGGGCACGGGGACGTTTTCATTCGTAGACGG
TGCGCCAGAGGGGCGCAGGCCTGTGAGCTCAAAGTGGTGTTTTAGTTGGA
AGACCAACAAGGAAGGGAAGATAGACACGTTCAAAGCGCGTCTGGTTGCT
AGGGGGTTTTCGCAAATCCCGAACGTCGATTATTTCCATTCGTCTTCCCC
TTGCCCCTCATCCGCATCCATTAAGCTGATGCTTGCGGTAGCGAACGAGA
AGGGCATGAACCTCAATCACTGGGATGTGAAGCAGGCGTATACACACGCT
ACGCTAGACGAGGAGGTTTTTCTGAAGCTCCCCGCTGGGTGCGGGGACAA
GTCGCATAAGATTGCTAAGGCTGAGCGTGCGATTTATGGTCTGAAGCAGA
GCGGTAGGCAGTGGGGGTACCACGCTGCTGATACGCTAGTCGAGAACGGG
TTCGAGCAATGCAAGGCGGACCCGTGTGTTTTCCGCAAGATGGTAGACGA
AGTCGTGGTGATGATTATCGTGATTTATGTGGATGACATTTTGGTGGCTG
GGTCTGACGAGGATTGCGAGGAGTTGCTTGCTTCTCTCAACAAGAAATTT
CCCACCAAAAACCTTGGAGAGTGTCAATGGTTTGATGGGTGTGCCATCGA
GAGAGATGTAGAGGCTGGGACTCTTAGAATCTCCCAAACCGCGTATATCG
ACAGCATGGTTGAACGCTTCGATGTGAAATCAACTTCCCGCATCCCCGCT
ACCCCTGGTGCCGATCTAGGGCCGAAGCGAGAGGATGAGGAAGGAGGGGA
GTGGCCGGTGAGGGAGGCCATCGGCAGCATGATGTGGGTGTCGACTTTCT
CGCGTCCAGACGTCTCGTTCGCCGTGCGTGCGGTAGCGCGCCACGCCCAC
GCCCCGGCGAAGCGGCACTGGGATGCCATACAGAAGATCCTCGGCTACCT
GAAAGGGACGAGGGACCTCGGCATCACCTACCAACGGGGATCGGGGTTAG
GGCTGGCCGTGTACGTAGACGCTAGCTACGCCGACACGGAGGATAGGCGT
TCGGTGTCAGGGTTGGCGACGACGGTTGGAGGTACCGTAGTCAGCCATGG
TAGCAAGACGCAGAGTATCGTGTCTTTGTCTTCAACGGAAGCCGAGTACA
TTGCTGCCGGGGAGGGTGTCAAGGAGGCGTTGTTTGTGCGTGCTGTGCTT
TCGTTTGTCGCCCCAGAGACCAGTGGTAGCAGCATCAAGGTCCTTGAGGA
CAACCAGGGGGCCATAGCGTTGGTGCAGAACCCCCTCAGCTCAGGTCGCA
CGAAACACATCGACGTGAGGTATCATTTCATCCGAGGATTGTTTAGGTCG
GGGGATATTTCGGTCAAGTTTGTTCCGACAACGGAGCAACACGCGGACCT
CCTTACCAAGGCCCTTAGCAGGGTCAGTCTGCAGTACCACCGGCGCAAGC
TGATGAATTTGCCGGAGTAG
back to top