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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LS60 |
| ProteomeId | EsuBft151_16 |
| Protein domains | PTHR21299 |
| Protein domains | IPR014729 |
| Protein domains | G3DSA |
| Protein domains | IPR003721 |
| Protein domains | IPR004821 |
| Protein domains | SSF52374 |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | pantothenate synthetase os:chloroflexus aurantiacus (strain atcc 29364 dsm 637 y-400-fl) gn:pan [Automatic annotation] |
| Nb exon | 6 |
| Max annot lvl | 2759|Eukaryota |
| Length | 1263 |
| Hectar predicted targeting category | other localisation |
| Evalue | 4.51e-201 |
| EggNOG OGs | COG0414@1|root,KOG3042@2759|Eukaryota |
| Ec32 ortholog description | Pantoate--beta-alanine ligase |
| Ec32 ortholog | Ec-12_004720.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00022,RC00096,RC00141,RC00200 |
| KEGG ko | ko:K00606,ko:K01918 |
| KEGG Reaction | R01226,R02473 |
| KEGG Pathway | ko00410,ko00770,ko01100,ko01110,map00410,map00770,map01100,map01110 |
| KEGG Module | M00119 |
| GOs | GO:0003674,GO:0003824,GO:0004592,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0006082,GO:0006520,GO:0006573,GO:0006575,GO:0006732,GO:0006766,GO:0006767,GO:0006807,GO:0008150,GO:0008152,GO:0009058,GO:0009081,GO:0009108,GO:0009110,GO:0009987,GO:0015939,GO:0015940,GO:0016053,GO:0016874,GO:0016879,GO:0016881,GO:0019752,GO:0032787,GO:0033317,GO:0034641,GO:0042364,GO:0042398,GO:0043436,GO:0043603,GO:0043604,GO:0044237,GO:0044238,GO:0044249,GO:0044271,GO:0044281,GO:0044283,GO:0044424,GO:0044444,GO:0044464,GO:0046394,GO:0051186,GO:0051188,GO:0071704,GO:0072330,GO:1901564,GO:1901566,GO:1901576,GO:1901605 |
| EC | 2.1.2.11,6.3.2.1 |
| Description | pantoate-beta-alanine ligase activity |
| COG category | H |
| BRITE | ko00000,ko00001,ko00002,ko01000 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0004592 |
| GO | 0015940 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft151_16a-0001 ID=EsuBft151_16a-0001|Name=EsuBft151_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1263bp|location=Sequence derived from alignment at Scaffold_392:266793..272438- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCACACCGCAGTACTGCAGTGGAGAGACGCCACTCGCACAGGCGCCTGGA
ACAATAGATGGTCAGTATCTTGCTACGGGGTCTGTCAAACCAACCACGGC
GCTCGCTGTTTCGAAGGGGAAAGGTTTGCCGACGACGGGTGACTTCCCCG
CTATCCTCTCCGAGCTTGTTGCACGCCGCGTCTGCACCACGGGCAACGAT
GTCAACGCCAGCAACACCGACAGCAGAGCACTCAGAGCCAGGAGTGTTCA
GCACCATTGTTGACTTTCGTCGGGCGAGAAGGAGCCTCCCACACGACGCG
TCGGTGGGATTCGTGCCGACCATGGGCGCCCTGCACGAGGGCCACTTGGA
CCTCTTCCGGAGAGCGAGGCGGGAGTGCGACATTGTAGTGGGGTCGGTGT
TCGTCAACCCTGCGCAATTCGCTCCACATGAGGATCTAGACCGGTATCCC
CGCCAGCTGGAGCGAGACTTGGAGCTGCTGGGCGGCGAGGGGTTGGTGGA
CCTCGTCTTTGCCCCCACCCGCGAGGAAATGTACTCGCCGAACCACCGAA
TATACGTCGATCCGATGGGGTTCGACGATCTGCCGGAAGGCGTCGCAAGG
CCGGGGTTCTTCCGGGGGGTGGCCACCGTCGTGACCAAGTTACTGAACGT
GGTGCAGCCCGATTTCGCGTTCTTCGGACAGAAGGACGCGCTCCAATGCG
TGCTGGTCAAAAGGCTTGTTGAGGACCTCAACCTGCCCGTGACAGTGGTG
GTGAGCGAGACCACGAGGGAGGCGGACGGGCTGGCGATGTCGTCCCGAAA
CGCCTACATGTCCGCCGAGGAGAGGGCCGCGGCGCCGGCGGTGTACCTGT
CGCTGCGGGCGGCGGCGGACGCTCGCCAGCGAGAAGCGGACGCGGGAAGA
AACGCCTCTCGCAAGGAGCTAGTTGCAGCGGCGGAGGAGATTCTCTCGGC
TCAGCCACTGATCACGTCCGTCGACTACCTATCGGTCGGCTCCCCGGTCA
CGATGGAGGAGTTGGAGGAGATAGACCAGGCGGGAGCGGTCGTTTCTGTC
GCAGTTCGGCTTGGGTCCGTCAGGCTGATCGACAACGTGGTGCTTCCCCC
GCTCGCAAGATGAAAGTAGTGACGGTCGCCGTTTGTGTTTTTTCGTGTGC
ATCTTTTTGTATTTTGGGTAGGTGTACGGCCGGCGATCGATGTGCAGGTG
CCGTTTACAGGACCTCGCCAGCAGCGCGAGTTGAGGTGTTGCAGCTGAGT
GTTAGGCCACTTG back to topprotein sequence of EsuBft151_16a-0001 >EsuBft151_16 ID=EsuBft151_16|Name=EsuBft151_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=304bp
MSTPATPTAEHSEPGVFSTIVDFRRARRSLPHDASVGFVPTMGALHEGHL
DLFRRARRECDIVVGSVFVNPAQFAPHEDLDRYPRQLERDLELLGGEGLV
DLVFAPTREEMYSPNHRIYVDPMGFDDLPEGVARPGFFRGVATVVTKLLN
VVQPDFAFFGQKDALQCVLVKRLVEDLNLPVTVVVSETTREADGLAMSSR
NAYMSAEERAAAPAVYLSLRAAADARQREADAGRNASRKELVAAAEEILS
AQPLITSVDYLSVGSPVTMEELEEIDQAGAVVSVAVRLGSVRLIDNVVLP
PLAR back to topmRNA from alignment at Scaffold_392:266793..272438- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft151_16a-0001 ID=EsuBft151_16a-0001|Name=EsuBft151_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5646bp|location=Sequence derived from alignment at Scaffold_392:266793..272438- (Ectocarpus subulatus male Bft15b)
GCACACCGCAGTACTGCAGTGGAGAGACGCCACTCGCACAGGCGCCTGGA
ACAATAGATGGTCAGTATCTTGCTACGGGGTCTGTCAAACCAACCACGGC
GCTCGCTGTTTCGAAGGGGAAAGGTTTGCCGACGACGGGTGACTTCCCCG
CTATCCTCTCCGAGCTTGTTGCACGCCGCGTCTGCACCACGGGCAACGAT
GTCAACGCCAGCAACACCGACAGCAGAGCACTCAGAGCCAGGAGTGTTCA
GCACCATTGTTGACTTTCGTCGGGCGAGAAGGTTGGCAGTTATGCAACTG
CAATTGTGTGGTAGCTCATCACAAACGCCATACAACTCCAATATGCAATG
TGCAAGTTCATGGTCCCATCCTTGGTTTTGCAACGTACGCGCTCTGCCGT
CGATGTAGCGGTTGCCTAGAATTCAAGCTAATCAGGCGGCTATGTAGAGG
GCGGTGCATGACGATGCTTGATATGCTGTCCTTGTTTAACTCCTCCTGCT
TGTATGTGATGATGCTAGGAGTAGTCTGGCAACACATGCTGGGAAACTGC
GGACAGCAATGTGTCCTTGTTGTAGCTATCCCATGTGGCATGATTCAAAT
TCAAACTGTGGTACAGATTAGCGATTTTGCTTTGGGTTTAGGCAAGTCTC
AGGGGTGGTCCGGCTACGAGGCTCGCTGATTGATTGCCTCCCATGTGCTC
GATATCATGCACCGGTGGGTGACGGGTATGCACCGCACTCACGTAAGGAT
TTCATGCATAATTCCGAGGACGTCCTTCCCGATTCCTCTTCGAACAAATC
ATCCATCTGACGGCGCGGTAACAACAATGAAGCAGATCCACCGCCGTTCA
TCATTTGTACACAAGCACCCGCAAACCGCACGAACGCACGCAATAAACTC
GACAGGAGCCTCCCACACGACGCGTCGGTGGGATTCGTGCCGACCATGGG
CGCCCTGCACGAGGGCCACTTGGACCTCTTCCGGAGAGCGAGGCGGGAGT
GCGACATTGTAGTGGGGTCGGTGTTCGTCAACCCTGCGCAATTCGCTCCA
CATGAGGTGGGCGCATCTCTGAGCCACGCGTGGTGGTTCATTCGTTTCTT
GATCCTCGTAAATGGTCGTTGTGCCAGCAACTGTGCGCAATAAGCCAGGG
TAGTGTAACACCCAAGGCGTTGGCTGATCATACCGTCGAGCTTCTAGCTT
TTCCTTCACAGTTGCGTATGCCTACGAAAGCAAACTTACAGTACCGGAGA
AAACAGAAGCGCGATTTGTGCTCGCGCGCCCTGGGTGCTCCCGCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNCTGGGTGCTCCCGCCCCCCCCCCCAC
CCTGCCGGTAACTCCTATGTCGCCTCTACCGCCGTGTTAGTTTTACATGA
CCAGCATGCCAATCTGTAGCACTTCTTACCGCTGGCTTTGGTGAGTCACA
AGATCCTTCGTATGTGTGTGTGTCTACTGCTGCTGCTGCTGCTGCTGCTT
TTTTTGGCTGCTGGCGTGCGTCAGGATCTAGACCGGTATCCCCGCCAGCT
GGAGCGAGACTTGGAGCTGCTGGGCGGCGAGGGGTTGGTGGACCTCGTCT
TTGCCCCCACCCGCGAGGAAATGTACTCGCCGAACCACCGGTGGGAAATA
TATATTTATAAAAATTTCTTACTGAAAACCAAGAAAAGAGTGGATATAGC
ATAAAGTCGTTGTGTGATCCTATTATACGTGTAATTTCTCGAGGGAAAAC
ATATCCGTACCATTCTATGTGGGCATATAGTTCTAAGCACGTCTTGTGGG
GCCTTTCGTAAAGGGTTTGTAGTCCCGGCCTGTACATGCGATTTTTTTTG
TTCGGCCCGACTTCGTTCATTTTAATGTGACGGTGTGCTTGCTTTGTTCA
CTGCAGGAACAAGGACGGTACGTTTACTATATTGCAGCGGGTAGGACAGC
CTCCAACGGGTACTGCAGGCAGCCGACTTTTGTGTGGTTCATCGATCGAT
GCCCGAGAGAGAACTCCCGCACACGCGCGTACGGCAGCAAGAGCTTGGTT
TTCGTTGTTTTTTTCGCGCTTGCGCCGTCAATAAAAACAGCTGTGCTTCA
TGTATGTGTTTCGTCTTCTTCCTCCTCTGCTTACCTTTTGAGTGCTGGCT
ATCAGCCTGTCCTTCTCATTGGCTAACTCGGTCTCTCTATCTTATCCTTG
TTACCATATTTTCCTGATCTGTTCTGGTTTGTATTTTTTTTTCTGACCTT
TTACCACCACTGCTCTCTCTAATTGGCGTGCGTACGTCTCGGCAGAATAT
ACGTCGATCCGATGGGGTTCGACGATCTGCCGGAAGGCGTCGCAAGGCCG
GGGTTCTTCCGGGGGGTGGCCACCGTCGTGACCAAGTTACTGAACGTGGT
GCAGCCCGATTTCGCGTTCTTCGGACAGAAGGACGCGCTCCAATGCGTGC
TGGTCAAAAGGCTTGTTGAGGTAGGCGTCCGTCCGCGAGTTGCCATTCGC
AGGTTACGTTCCCTGCCCAGCAGTCAACAATCGCACTCGAAATGTCTCTA
TGTAGACCCGCGGGTATCGTGTGCAGTACTCCCTCTCCTTCCCCAGAAAA
CGTCGCCCGTCGGAAAGCATTTTTGGAAACAATGTGCCGCCTCCTCGTCC
CGGGTCTGACGACCACCGCAAACGCGCGAGCTGTCTTCAACGCACCCACC
TCCCCCGTCGCCATTTTGAAGTGTAGAGTGTGCGCTTCAAGGCCAAAGGG
CATGCGATCAACAAGCGCGCCCCCTTCCCCTATTCCCTCTCTATGACAAC
ACATTTTTTGTCAAGGACCTCAACCTGCCCGTGACAGTGGTGGTGAGCGA
GACCACGAGGGAGGCGGACGGGCTGGCGATGTCGTCCCGAAACGCCTACA
TGTCCGCCGAGGAGAGGGCCGCGGCGCCGGCGGTGTACCTGTCGCTGCGG
GCGGCGGCGGACGCTCGCCAGCGAGAAGCGGACGCGGGAAGGTGCGTTGT
GGACGCGAGTATTGCAGAGGTACATGCGAATACTTACCGTTAATGAACAC
CCCCCACAAGTGTCACGCGGAAAAGGGCAAAGCACGAGCAGGGAAGCTGC
ACCCAAGACTCGCAAATCGGCACCTCGATACACGCATCAAATTGACGGTT
TTGAAGAGCGTAATCGTACCGCCGCTAGAGTACGCCGGAGAAGTATGGGA
AGGAAATAAGAAGATAGTGAATGAACTCGAGGCGGCGCAGATGAAAGCAG
CGAAAATCATCCTAGGATGCTCCAAGCGCACAAGTAATGCAGCCGTCATG
GCAGAAATGGGGATCCAATTCATACGGTCGGCAAGAGACGCGAGGAAGCT
GACATGGCAGTATCGCATGTGCGGGATGGGAAGGGAGAGGTTGCCGAGAA
TTGTATGGGAGGCGAAGTGGGCAAGCAAAAAGAGGGGTAGACAACCCGCG
GAATGGGTCAAGGTTGTAGAGGACGTATGGAAGGGGCTCGACATCGACGA
AGATGAAACGCTGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNCCGCAGACACATTCTGACAGCACTTCAGACAGCAGCT
TTGTGCCCCGCCAGCTGCTTGTTCCATGCCTACCATGGTGTTTTTGTACA
GACAGCACTTCAGACAGCATTATGCTGTAGTCGGCAATCTTCCGTTTTGG
TATAGAGTGGGACAGGGAGGGGGTGATGCTACTGTAGTCGAACGGTGGGA
CGGACGTGCAGTTCAGTTTTTGGGCACGCATACGGTGCTGCAGGGATTTT
TAGGTGTACCTCTTCGGGCTCTTGGATACCTTTTTCTCGTTGTATGTGTG
CGTGTTCTTTAGATCCTCAGATGGCTCTAGCACTGTCGTGACCACGGGCT
GAGAGTCTTTTGCTAGATTTTGGCATTTAGCAACTGACATACGGTTTAAT
GTGAAGACAACAACAACAACAACAACAACAGGGAGATGTTTGAGGCATGG
AATAGAGAAGAGAGGGCGGTAGCTGTACTGGGGCATAGGAGGTGGGTCGA
AAAGGCGGGAAGGGACATCGTTAGTATAGACAGACTGGGGAAGACATTTT
TGAGCCACCTTTGGCAAAGTAGAAAGGAACGATTGACCATCGGTGATCGG
TCCTGTGGGAGCAATGCTCCGTCCTCTCGAGGACGCGTGGTCAATGGTCT
AACCGCTAAGGCATGCAAAACATAAGGGTACGCCCCCCCCACAAGTGTCA
TGCCAAGGTGAATATGTTTGTGCAGGCCGACTTGATCCAAACTCTGCGAG
GTCTATGGTTTGACGACTACGGCTTGTGTCGACATGAAAACATCCCCTCT
TCCCCCGATGACACACTCGGTGGTCGATTTGGTAGCGGCCAAGATGCTAA
CGCCGAGGTGTGCGGGTGTTGTTCCTGTCCATGTATGTTAGTGAATCCGT
TGATGCAACAAGCAGGCGTCTTTCTCGAACTTCACACCCAGCGCGATGAC
TGCATGCAATGGGCGTGCAGGAAGACGAGGTCGTTCGGAGAGAATGTGAC
AACAGGGTTGATTGTTGTGTGCCTTTGGAGGTATCCCGGAGTGTGGGTGG
ATGAGAAAGTGCCCAACACACCCCTTCGGCCAAGTTCTGGACTACCTTAA
TGTGCCTTGATATCATCGCCTCGACCCCCCAACAGAGCACCCAACTTTGC
GTTCAAGCCAACGCAGGCCTGAAGCTAATTTATTTAACAATTAATTGTCC
TTCCCTGAACCCACCTTTCTGTCCCCTCCCAGAAACGCCTCTCGCAAGGA
GCTAGTTGCAGCGGCGGAGGAGATTCTCTCGGCTCAGCCACTGATCACGT
CCGTCGACTACCTATCGGTCGGCTCCCCGGTCACGATGGAGGAGTTGGAG
GAGATAGACCAGGCGGGAGCGGTCGTTTCTGTCGCAGTTCGGCTTGGGTC
CGTCAGGCTGATCGACAACGTGGTGCTTCCCCCGCTCGCAAGATGAAAGT
AGTGACGGTCGCCGTTTGTGTTTTTTCGTGTGCATCTTTTTGTATTTTGG
GTAGGTGTACGGCCGGCGATCGATGTGCAGGTGCCGTTTACAGGACCTCG
CCAGCAGCGCGAGTTGAGGTGTTGCAGCTGAGTGTTAGGCCACTTG back to topCoding sequence (CDS) from alignment at Scaffold_392:266793..272438- >EsuBft151_16a-0001 ID=EsuBft151_16a-0001|Name=EsuBft151_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=915bp|location=Sequence derived from alignment at Scaffold_392:266793..272438- (Ectocarpus subulatus male Bft15b)
ATGTCAACGCCAGCAACACCGACAGCAGAGCACTCAGAGCCAGGAGTGTT
CAGCACCATTGTTGACTTTCGTCGGGCGAGAAGGAGCCTCCCACACGACG
CGTCGGTGGGATTCGTGCCGACCATGGGCGCCCTGCACGAGGGCCACTTG
GACCTCTTCCGGAGAGCGAGGCGGGAGTGCGACATTGTAGTGGGGTCGGT
GTTCGTCAACCCTGCGCAATTCGCTCCACATGAGGATCTAGACCGGTATC
CCCGCCAGCTGGAGCGAGACTTGGAGCTGCTGGGCGGCGAGGGGTTGGTG
GACCTCGTCTTTGCCCCCACCCGCGAGGAAATGTACTCGCCGAACCACCG
AATATACGTCGATCCGATGGGGTTCGACGATCTGCCGGAAGGCGTCGCAA
GGCCGGGGTTCTTCCGGGGGGTGGCCACCGTCGTGACCAAGTTACTGAAC
GTGGTGCAGCCCGATTTCGCGTTCTTCGGACAGAAGGACGCGCTCCAATG
CGTGCTGGTCAAAAGGCTTGTTGAGGACCTCAACCTGCCCGTGACAGTGG
TGGTGAGCGAGACCACGAGGGAGGCGGACGGGCTGGCGATGTCGTCCCGA
AACGCCTACATGTCCGCCGAGGAGAGGGCCGCGGCGCCGGCGGTGTACCT
GTCGCTGCGGGCGGCGGCGGACGCTCGCCAGCGAGAAGCGGACGCGGGAA
GAAACGCCTCTCGCAAGGAGCTAGTTGCAGCGGCGGAGGAGATTCTCTCG
GCTCAGCCACTGATCACGTCCGTCGACTACCTATCGGTCGGCTCCCCGGT
CACGATGGAGGAGTTGGAGGAGATAGACCAGGCGGGAGCGGTCGTTTCTG
TCGCAGTTCGGCTTGGGTCCGTCAGGCTGATCGACAACGTGGTGCTTCCC
CCGCTCGCAAGATGA back to top
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