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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LS64 |
| ProteomeId | EsuBft151_13 |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Protein domains | PTHR10434 |
| Protein domains | SSF69593 |
| Protein domains | TMhelix |
| Protein domains | IPR002123 |
| Protein domains | G3DSA |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | TRANSMEMBRANE |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | 1-acyl-sn-glycerol-3-phosphate acyltransferase chloroplastic os:arabidopsis thaliana gn:lpat1 p [Automatic annotation] |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 3008 |
| Hectar predicted targeting category | signal anchor |
| Evalue | 1.07e-133 |
| EggNOG OGs | COG0204@1|root,KOG2848@2759|Eukaryota |
| Ec32 ortholog description | 1-acyl-sn-glycerol-3-phosphate acyltransferase |
| Ec32 ortholog | Ec-12_004670.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG rclass | RC00004,RC00037,RC00039 |
| KEGG ko | ko:K00655,ko:K13509 |
| KEGG Reaction | R02241,R09381 |
| KEGG Pathway | ko00561,ko00564,ko01100,ko01110,ko04072,ko04975,map00561,map00564,map01100,map01110,map04072,map04975 |
| KEGG Module | M00089 |
| GOs | GO:0000003,GO:0003006,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0006629,GO:0006644,GO:0006650,GO:0006655,GO:0006793,GO:0006796,GO:0007275,GO:0008150,GO:0008152,GO:0008610,GO:0008654,GO:0009058,GO:0009507,GO:0009526,GO:0009536,GO:0009790,GO:0009791,GO:0009793,GO:0009941,GO:0009987,GO:0010154,GO:0019637,GO:0022414,GO:0031967,GO:0031975,GO:0032501,GO:0032502,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044237,GO:0044238,GO:0044249,GO:0044255,GO:0044422,GO:0044424,GO:0044434,GO:0044435,GO:0044444,GO:0044446,GO:0044464,GO:0045017,GO:0046471,GO:0046474,GO:0046486,GO:0048316,GO:0048608,GO:0048731,GO:0048856,GO:0061458,GO:0071704,GO:0090407,GO:1901576 |
| EC | 2.3.1.51 |
| Description | 1-acylglycerol-3-phosphate O-acyltransferase activity |
| COG category | I |
| BRITE | ko00000,ko00001,ko00002,ko01000,ko01004 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0051656 |
| GO | 0016747 |
| GO | 0051649 |
| GO | 0030286 |
| GO | 0046474 |
| GO | 0003774 |
| GO | 0005874 |
| GO | 0006810 |
| GO | 0006996 |
| GO | 0007017 |
| GO | 0009941 |
| GO | 0016021 |
| GO | 0009791 |
| GO | 1902580 |
| GO | 0048608 |
| GO | 0022607 |
| GO | 0044702 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft151_13a-0001 ID=EsuBft151_13a-0001|Name=EsuBft151_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3008bp|location=Sequence derived from alignment at Scaffold_392:236251..240348+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCCTTGCTGCGAGCATCATGCCGATGATCACGACAGCCATCATGATGT
GTTTGGCTCCGTCAAGACCCTGGCGAGCACGGCGGCGTCAACCGTCATGA
GCCTGGCGGCAGACCTGGCTGCGCAACCCTCCCAGTGGCCGCGCTGGGCC
TGGGTCTGCCTGGGCGTGTGGGTCCTCCTCTCGTGCTACTTCCTCCTGTT
CGCCGTGGCCATGTACCTCCAGGAGCTCAAGTCCTACGGCGGGGCGTCGA
GGGTCAGCTTCCCTAAGATGCTCGCGTTCTCGCTCACCTGGATGAACGGA
TCCCTCCTGTGCTCCGCGCTGTGCATCCCAGACCTGCTCCTCGGCAGGCG
GGAGCGGGCCGCCGAGAAGGTCCACTACTACGGCAGCATCATGGGCCAGC
TCATGTTCCGGATCCTTTCCAAGCCCCCGGTTGTGATCGGGCTGGAGAAC
CTGCCTCCGGACGGGGAGAAGGGCATGGTGTACGTGTCGAACCACCAGAC
CTCGGTCGACATCGCCCTCTTTTACTACATCGGAGCGGAGCGCAAGTTCT
CATGGGTGAGCAAGAGCACGGTGTTTCTCATCCCCGGGGTAGGGCTGCTC
ATGAAGATCGCGGGGTACGTTGCCCTGACCCGCGGCAACCGGGACAGCGT
CAAGAAGATGTTCGACGACTGCAAGGAGCGACTCGCGGCCGGCTGGTCGG
TCATGATTTTCCCCCAGGGCACCCGGAGGCGGCTGAAGGTGCTGGACTTC
AAGGACGGGGCGTTCCAGCTCGCCATCGACAGCAACAGCGTCGTGGTCCC
CTTCACGCTTGATCTACCGGAGAACTTGTTCCACGGCCCCAGGCAACGCA
CCAAGATCACCGTGCACGAGCCCGTCCGCCCGGGGGACCCCGCGTTCAAG
GACGTGGCGACGTTGCGCAAACACTGCTTCGACACCGTCATGGGGGCGCT
TCCGTACGCCGAGGGGATGCTCGAGGACCAAAGGAAGCAGAAGGAGGCAG
CGGCGGCGGCGGCGGCGGCGGCAGGCGAAAGGACGGGCAGCACACCGGCC
ATCGAGAGCAAGAAGACCAAGTGAAGGGTTGACAGACAAAATCCGACAAG
AAAGAGGGCCACTTTTTCTTCCTCATGCGTAGTAGAGATTGGTGTGTGGA
GGAAGGGGCAGAGCGGGTGGGCGAAAAGTAACCGGCGGCGGAGGCTGAAA
ATATTTGTGATATCACCGCGCCCGCCCTCGGGGGGGTGGGGTGGGGTGGC
TTACGCGTCGCGGGATTATGTGGCGGAGGGTTGGCGCATCGCGGTCGGGA
GAGCAGGACGGGAGCTCTCGCAGAGGCCGGGATTGATTCTCATAAGGGTG
AGGCCTTCTGGAGGGCTGCTTGCTTGCTTGCTTGCTTGGAGCACGATTTT
GCAGGGTGGATTTGAATTTTGCTTTTTCTTTTCGGTTTTTGTGTATATGT
TGTGTTGGTTCTGTTCTCTCCCTTTGCAAAGACGTGTGGCGCGTTGCCTG
GCTGGCACCCTTGACGAAATTTCGTTAATCGAGAAGGAGAGAGAGAAGGG
CAAAAGGGGGGAGGCGCGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNGGGGGGGGGATCGCGCGGAAGTTTTTG
AAAGGGCGGGGGTGGTTGTGCGCGAAAAAGTTGGGAGGCGCAGGACTTTT
ATTTTTGGGGTGGTCGCGCAGGAACGAGTAGGAGTGCTCCCGCTCGCCCG
ATTCGCACACATCATTGTACTATGCTATCGACCAATTTACCGCTCTCTCT
GTCTCACACACCTGATGGGCTACTAGGTTTACCCTACGTTCGCGTAGGCT
GGCCCTCCCCTGTCTGCCAAATATTTTCGAGCGTCGGGGAATTGTCTATC
ACGTACGTACCAGCCGCCTTTTTGAACAACATGGGGGGAAGGTATCAGGC
CAATGGGTGATGAATGTCGATGAAAACCTCCGTTCATGTGTAGTAGAAAC
ACCTTACTTTGGTCTGGGGGATGCCACAGTTTGGGTGTAGTGATGGATAC
GTCGTGCTTCCGTGTATTGTTAAAGAATCACACCTACATTCACTTCTTCT
CGGTAAGGTGGGATATATCCACTTTTTTTTGTGGTTAATTTGTTGTCCTC
GTATCTTGTACAAGAAGCTTTTTGGCGGTATCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCNATTGAGTTTGTTTAGTT
TCATTCGGGTGGCGAGAGGGGATGCTTGACAGAAACGGGGTGGGGAGGTA
GGCAGGGAGTTTCGCCGTTGAAATAGAGAAACCTCCCAGGAGGCGTCGAA
TAATTAGGGAAGGTTTGCATTAAATATAGTTGGACAGCACAACAATCAGC
GCACGCTCCCTGATATCAGGAGGTCAGCGACTGTAACCCAAGTGCCATGG
CATGCCATGTCGGGCGTAGGCGAACAAGTGCCTGCTCTAGCTTTCTTTTG
TCGGGTCTGCGCGGTGTGTGCGTGTGTGTGTTTGTAACCCCGCACGTGTG
TACTATTCATGGCAGACACCAAGAAGAGTTGGCAGCCAGAAGCGTACGGA
GAGGTAGAAAGAGATGACAGGCACGTATAAGGACTGGTGTTAACTCGGGT
ACCAACATGATCGAGGGGCTCGGATGAGGGACTATTTGTTCTTTGTTGGC
GGATGGTAAAGGCGTGGGAGTCAAGTCTGTCTCTGCGGGCAGGGGGGGAA
GGGCATGGTGCCTGCTCTGCGAGTGGTGCGCGACAAATGCGTGCGTTATT
TCTTGTCTTGTGGTGGAAGACTTCCCGTGGTGCCCCCCCCGTGTCTTTTG
CTGTTGCGCCGTCTGGACGGTAAATCGACCCTGAATATTCTGAAGCCGCC
CCTTTCAGGATGTCTAGTTTCTGTTGCAACTTGAAAAAATTGGCGAACTA
AACAATGCTTTGGACTTTTTCCAGTCTTGTGGAAGCTACCCCAAACCATT
TTCTCTCT back to topprotein sequence of EsuBft151_13a-0001 >EsuBft151_13 ID=EsuBft151_13|Name=EsuBft151_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=357bp
MPCCEHHADDHDSHHDVFGSVKTLASTAASTVMSLAADLAAQPSQWPRWA
WVCLGVWVLLSCYFLLFAVAMYLQELKSYGGASRVSFPKMLAFSLTWMNG
SLLCSALCIPDLLLGRRERAAEKVHYYGSIMGQLMFRILSKPPVVIGLEN
LPPDGEKGMVYVSNHQTSVDIALFYYIGAERKFSWVSKSTVFLIPGVGLL
MKIAGYVALTRGNRDSVKKMFDDCKERLAAGWSVMIFPQGTRRRLKVLDF
KDGAFQLAIDSNSVVVPFTLDLPENLFHGPRQRTKITVHEPVRPGDPAFK
DVATLRKHCFDTVMGALPYAEGMLEDQRKQKEAAAAAAAAAGERTGSTPA
IESKKTK back to topmRNA from alignment at Scaffold_392:236251..240348+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft151_13a-0001 ID=EsuBft151_13a-0001|Name=EsuBft151_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4098bp|location=Sequence derived from alignment at Scaffold_392:236251..240348+ (Ectocarpus subulatus male Bft15b)
ATGCCTTGCTGCGAGCATCATGCCGATGATCACGACAGCCATCATGATGT
GTTTGGCTCCGTCAAGACCCTGGCGAGCACGGCGGCGTCAACCGTCATGA
GCCTGGCGGCAGACCTGGCTGCGCAACCCTCCCAGTGGCCGCGCTGGGCC
TGGGTCTGCCTGGGCGTGTGGGTCCTCCTCTCGTGCTACTTCCTCCTGTT
CGCCGTGGCCATGTACCTCCAGGAGCTCAAGTCCTACGGCGGGGCGTCGA
GGGTCAGCTTCCCTAAGATGCTCGCGTTCTCGCTCACCTGGATGAACGGA
TCCCTCCTGTGCTCCGCGCTGTGCATCCCAGACCTGCTCCTCGGCAGGCG
GGAGCGGGCCGCCGAGAAGGTCCACTACTACGGCAGCATCATGGGCCAGC
TCATGTTCCGGATCCTTTCCAAGCCCCCGGTTGTGATCGGGCTGGAGAAC
CTGCCTCCGGACGGGGAGAAGGGCATGGTGTACGTGTCGAACCACCAGAC
CTCGGTCGACATCGCCCTCTTTTACTACATCGGAGCGGAGCGCAAGTTCT
CATGGGTGAGCAAGAGCACGGTGTTTCTCATCCCCGGGGTAGGGCTGCTC
ATGAAGATCGCGGGGTACGTTGCCCTGACCCGCGGCAACCGGGACAGCGT
CAAGAAGATGTTCGACGACTGCAAGGAGCGACTCGCGGCCGGCTGGTCGG
TCATGATTTTCCCCCAGGGCACCCGGAGGCGGCTGAAGGTGCTGGACTTC
AAGGACGGGGCGTTCCAGCTCGCCATCGACAGCAACAGCGTCGTGGTGGG
GAATGGTCGATGGCGTTTGCTGTGTGTACATGCTGCAGTTTAGATCGTGT
GGTCTTGTTGCCCATTACCCACTTGGTCTTGTTTTTTTCACGCCTACTTC
GAGCTGCCCGGCAAGGAGCTTGCTACCCATTTCATCATGATTTGTTGTTC
CGGGGTGTCTTGAAGACGTGTACGATGCCCCCTCAGTAAGTTGCAACGAC
ACTGCTTGTAGCACGAGCTATACATGTTCCCTGCTGCATACCCATGTTGT
TGCACCGCCCGCTTGTCGAAGAACCACCGCGAACGCGTGTGGGAAACGCA
CGGTGCCTTCAGATTGAAAACAACACCAAGACAAGACAGCAGCAACAGTA
GCAGTCCACCACTTGAGTGTCTACTCTTGTTGGAAGCTGGCAGAGTCTCT
CCGCGTGCCCGTTCACTTGTGGTCCGTTGGCACCAACGGCGTGGCCGAAC
ACACCAACGCCGCAAGCACCCAAACCATGACCAAGTCTGACTCGCGTTTT
GTACTGTATTTCACTCTTTTTTTTCAATCCAGGTCCCCTTCACGCTTGAT
CTACCGGAGAACTTGTTCCACGGCCCCAGGCAACGCACCAAGATCACCGT
GCACGAGCCCGTCCGCCCGGGGGACCCCGCGTTCAAGGACGTGGCGACGT
TGCGCAAACACTGCTTCGACACCGTCATGGTGAGTCCTGGTAGAGACCGC
ATGCCTCCTGATCTGCTGGAAGCGCACCCTCCAATACACTCTCCACGCAA
GCAATGGTAGCGGTGAAGCATGGTGTGCTCAGATTGTGCTGCGGAACAGC
TGTAATTTACACGTGAAAAATCTGGGCGTTTCTTGGGCTTGGTGAAAGTG
TTTCGCCACGTTCGTAGCTATCGCCAGCGGGTGGTCGCACGCACGCGTTC
TGTTGGTGCAAGTCCTCTCTGGGATACCCAAGAGCAGGCTTGTGCAAGAG
AGGGAAGGGCATCCCCTCTCGTCCGCGGGCTTGTGCTGTGTACCGCCAGT
CAGATTTGCCTGCCCGTGCGCTCTGCTGGAGACGGGCGGGGGGTGGATCC
CCCCGTCTTGTGCTACAGCGGTCGTTGTGTGGGTCGTTAAGAGCTGTTTG
GTTCCGCTTTAACAAATAGTTTTTTTCTGCTTCTCACCCGAAGTCTGTGC
GAACCCTCTAACGCTGCCACTGCTGCTGCTGCTGCTGCTGCTGCTGCTGC
TGCTGCTGCTGCTGCTATCCATCGGTTCGAAGGGGGCGCTTCCGTACGCC
GAGGGGATGCTCGAGGACCAAAGGAAGCAGAAGGAGGCAGCGGCGGCGGC
GGCGGCGGCGGCAGGCGAAAGGACGGGCAGCACACCGGCCATCGAGAGCA
AGAAGACCAAGTGAAGGGTTGACAGACAAAATCCGACAAGAAAGAGGGCC
ACTTTTTCTTCCTCATGCGTAGTAGAGATTGGTGTGTGGAGGAAGGGGCA
GAGCGGGTGGGCGAAAAGTAACCGGCGGCGGAGGCTGAAAATATTTGTGA
TATCACCGCGCCCGCCCTCGGGGGGGTGGGGTGGGGTGGCTTACGCGTCG
CGGGATTATGTGGCGGAGGGTTGGCGCATCGCGGTCGGGAGAGCAGGACG
GGAGCTCTCGCAGAGGCCGGGATTGATTCTCATAAGGGTGAGGCCTTCTG
GAGGGCTGCTTGCTTGCTTGCTTGCTTGGAGCACGATTTTGCAGGGTGGA
TTTGAATTTTGCTTTTTCTTTTCGGTTTTTGTGTATATGTTGTGTTGGTT
CTGTTCTCTCCCTTTGCAAAGACGTGTGGCGCGTTGCCTGGCTGGCACCC
TTGACGAAATTTCGTTAATCGAGAAGGAGAGAGAGAAGGGCAAAAGGGGG
GAGGCGCGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNGGGGGGGGGATCGCGCGGAAGTTTTTGAAAGGGCGGG
GGTGGTTGTGCGCGAAAAAGTTGGGAGGCGCAGGACTTTTATTTTTGGGG
TGGTCGCGCAGGAACGAGTAGGAGTGCTCCCGCTCGCCCGATTCGCACAC
ATCATTGTACTATGCTATCGACCAATTTACCGCTCTCTCTGTCTCACACA
CCTGATGGGCTACTAGGTTTACCCTACGTTCGCGTAGGCTGGCCCTCCCC
TGTCTGCCAAATATTTTCGAGCGTCGGGGAATTGTCTATCACGTACGTAC
CAGCCGCCTTTTTGAACAACATGGGGGGAAGGTATCAGGCCAATGGGTGA
TGAATGTCGATGAAAACCTCCGTTCATGTGTAGTAGAAACACCTTACTTT
GGTCTGGGGGATGCCACAGTTTGGGTGTAGTGATGGATACGTCGTGCTTC
CGTGTATTGTTAAAGAATCACACCTACATTCACTTCTTCTCGGTAAGGTG
GGATATATCCACTTTTTTTTGTGGTTAATTTGTTGTCCTCGTATCTTGTA
CAAGAAGCTTTTTGGCGGTATCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
CCCCCCCCCCCCCCCCCCCCCCNATTGAGTTTGTTTAGTTTCATTCGGGT
GGCGAGAGGGGATGCTTGACAGAAACGGGGTGGGGAGGTAGGCAGGGAGT
TTCGCCGTTGAAATAGAGAAACCTCCCAGGAGGCGTCGAATAATTAGGGA
AGGTTTGCATTAAATATAGTTGGACAGCACAACAATCAGCGCACGCTCCC
TGATATCAGGAGGTCAGCGACTGTAACCCAAGTGCCATGGCATGCCATGT
CGGGCGTAGGCGAACAAGTGCCTGCTCTAGCTTTCTTTTGTCGGGTCTGC
GCGGTGTGTGCGTGTGTGTGTTTGTAACCCCGCACGTGTGTACTATTCAT
GGCAGACACCAAGAAGAGTTGGCAGCCAGAAGCGTACGGAGAGGTAGAAA
GAGATGACAGGCACGTATAAGGACTGGTGTTAACTCGGGTACCAACATGA
TCGAGGGGCTCGGATGAGGGACTATTTGTTCTTTGTTGGCGGATGGTAAA
GGCGTGGGAGTCAAGTCTGTCTCTGCGGGCAGGGGGGGAAGGGCATGGTG
CCTGCTCTGCGAGTGGTGCGCGACAAATGCGTGCGTTATTTCTTGTCTTG
TGGTGGAAGACTTCCCGTGGTGCCCCCCCCGTGTCTTTTGCTGTTGCGCC
GTCTGGACGGTAAATCGACCCTGAATATTCTGAAGCCGCCCCTTTCAGGA
TGTCTAGTTTCTGTTGCAACTTGAAAAAATTGGCGAACTAAACAATGCTT
TGGACTTTTTCCAGTCTTGTGGAAGCTACCCCAAACCATTTTCTCTCT back to topCoding sequence (CDS) from alignment at Scaffold_392:236251..240348+ >EsuBft151_13a-0001 ID=EsuBft151_13a-0001|Name=EsuBft151_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1074bp|location=Sequence derived from alignment at Scaffold_392:236251..240348+ (Ectocarpus subulatus male Bft15b)
ATGCCTTGCTGCGAGCATCATGCCGATGATCACGACAGCCATCATGATGT
GTTTGGCTCCGTCAAGACCCTGGCGAGCACGGCGGCGTCAACCGTCATGA
GCCTGGCGGCAGACCTGGCTGCGCAACCCTCCCAGTGGCCGCGCTGGGCC
TGGGTCTGCCTGGGCGTGTGGGTCCTCCTCTCGTGCTACTTCCTCCTGTT
CGCCGTGGCCATGTACCTCCAGGAGCTCAAGTCCTACGGCGGGGCGTCGA
GGGTCAGCTTCCCTAAGATGCTCGCGTTCTCGCTCACCTGGATGAACGGA
TCCCTCCTGTGCTCCGCGCTGTGCATCCCAGACCTGCTCCTCGGCAGGCG
GGAGCGGGCCGCCGAGAAGGTCCACTACTACGGCAGCATCATGGGCCAGC
TCATGTTCCGGATCCTTTCCAAGCCCCCGGTTGTGATCGGGCTGGAGAAC
CTGCCTCCGGACGGGGAGAAGGGCATGGTGTACGTGTCGAACCACCAGAC
CTCGGTCGACATCGCCCTCTTTTACTACATCGGAGCGGAGCGCAAGTTCT
CATGGGTGAGCAAGAGCACGGTGTTTCTCATCCCCGGGGTAGGGCTGCTC
ATGAAGATCGCGGGGTACGTTGCCCTGACCCGCGGCAACCGGGACAGCGT
CAAGAAGATGTTCGACGACTGCAAGGAGCGACTCGCGGCCGGCTGGTCGG
TCATGATTTTCCCCCAGGGCACCCGGAGGCGGCTGAAGGTGCTGGACTTC
AAGGACGGGGCGTTCCAGCTCGCCATCGACAGCAACAGCGTCGTGGTCCC
CTTCACGCTTGATCTACCGGAGAACTTGTTCCACGGCCCCAGGCAACGCA
CCAAGATCACCGTGCACGAGCCCGTCCGCCCGGGGGACCCCGCGTTCAAG
GACGTGGCGACGTTGCGCAAACACTGCTTCGACACCGTCATGGGGGCGCT
TCCGTACGCCGAGGGGATGCTCGAGGACCAAAGGAAGCAGAAGGAGGCAG
CGGCGGCGGCGGCGGCGGCGGCAGGCGAAAGGACGGGCAGCACACCGGCC
ATCGAGAGCAAGAAGACCAAGTGA back to top
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