EsuBft1026_3a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft1026_3a-0001 ID=EsuBft1026_3a-0001|Name=EsuBft1026_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1134bp|location=Sequence derived from alignment at Scaffold_385:220121..221254- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
CCACTTCTGTCCGACATCCCAGTGGGTACACCCACCGGCGTCAACTAATT
TTTTCATGTACCCACTTGTGTCTATTTTTTTACCCACATTTGTCCAAATT
GTACCCACTTGTGTCCACATACGGATGGCGGAAATCGAGCGGAAATTGAC
CTCCACGTCACCGCACGGCAGAACATCGAATAGCCTCGCAACGTCTCAGA
ACCTCCCAACCACGTATCCATGGCATCTTTCGTATCCATGACTGCCGACT
GCGGACCGACCGAGGAGGAACATGTCAGACACATGCCAGGCCCCTCCGGT
ACCGGAACGGGAGGATATCAGGCACAAAAAGATGCCGGCAGTAAGCCCGG
CAAGGAATGCACTATAACAACACACGCCACAAACAAATGCGTGACACACA
ACGGACAACAAAACCAACGGGTCGAACCTACAGGTCGCGCAAACAGAACA
AAACGACGCGCATTGAGCAACAATACTCACACACACGAAAGCATCAACCG
CCACCATGACGAGTGCACACCGACTCGTCACGGCAGCAGTAGGATGTCGA
GGCAGTTTGCTCTGCAGGGCGCTCGCTCAGGGTCAAGCGGGGGTGCACCT
CTGTCAACTGCTGGCGGCGCCATGGTTGAAGAGGCAACTTTTGCGACGTC
ACGTGCCTTCAAACACGCATTCGAGCGCTGCATGATCGCACAGTCTAGGC
AGTGCCGGCTAGACAAGCGGATTATTGGCGGTCGGGGCAAGCTCCACCGC
TGCACGGGAGCAATCGTCAACGGGAAAGCGACATCCGGCTGCCCGGTGCT
TGCGCGGGGGTGCAAGCAAACCGATGGCACCTGGAAGGTGACGGAGGTGG
TCCTCGATCATGTGGCGTGCACCGGCCAGGCCAGTAACAAAAAGCAGCGG
ATCAATCGCCGATGTGTGGAGAGGGAGGCAGCGGCGCTCGTGAGCGCCAA
CCACAGGATCACCTGTCCCTCGCTGGTGAAGACGCTCAAGGCAACCTCCG
GCGTGGATGTCAGCGAGAGGACAGCTAGCAGGATGCGGGCGGACATCCTC
GGCAAGGGAAAGGACGCGATCGCCAAGGAGTACCAACTCCTCCAGAGCTA
CTGCGACCTCCTCGGGAGGGACAACGGCANNNNN
back to top

protein sequence of EsuBft1026_3a-0001

>EsuBft1026_3 ID=EsuBft1026_3|Name=EsuBft1026_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=305bp
MASFVSMTADCGPTEEEHVRHMPGPSGTGTGGYQAQKDAGSKPGKECTIT
THATNKCVTHNGQQNQRVEPTGRANRTKRRALSNNTHTHESINRHHDECT
PTRHGSSRMSRQFALQGARSGSSGGAPLSTAGGAMVEEATFATSRAFKHA
FERCMIAQSRQCRLDKRIIGGRGKLHRCTGAIVNGKATSGCPVLARGCKQ
TDGTWKVTEVVLDHVACTGQASNKKQRINRRCVEREAAALVSANHRITCP
SLVKTLKATSGVDVSERTASRMRADILGKGKDAIAKEYQLLQSYCDLLGR
DNGXX
back to top

mRNA from alignment at Scaffold_385:220121..221254-

Legend: exonfive_prime_UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft1026_3a-0001 ID=EsuBft1026_3a-0001|Name=EsuBft1026_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1134bp|location=Sequence derived from alignment at Scaffold_385:220121..221254- (Ectocarpus subulatus male Bft15b)
CCACTTCTGTCCGACATCCCAGTGGGTACACCCACCGGCGTCAACTAATT
TTTTCATGTACCCACTTGTGTCTATTTTTTTACCCACATTTGTCCAAATT
GTACCCACTTGTGTCCACATACGGATGGCGGAAATCGAGCGGAAATTGAC
CTCCACGTCACCGCACGGCAGAACATCGAATAGCCTCGCAACGTCTCAGA
ACCTCCCAACCACGTATCCATGGCATCTTTCGTATCCATGACTGCCGACT
GCGGACCGACCGAGGAGGAACATGTCAGACACATGCCAGGCCCCTCCGGT
ACCGGAACGGGAGGATATCAGGCACAAAAAGATGCCGGCAGTAAGCCCGG
CAAGGAATGCACTATAACAACACACGCCACAAACAAATGCGTGACACACA
ACGGACAACAAAACCAACGGGTCGAACCTACAGGTCGCGCAAACAGAACA
AAACGACGCGCATTGAGCAACAATACTCACACACACGAAAGCATCAACCG
CCACCATGACGAGTGCACACCGACTCGTCACGGCAGCAGTAGGATGTCGA
GGCAGTTTGCTCTGCAGGGCGCTCGCTCAGGGTCAAGCGGGGGTGCACCT
CTGTCAACTGCTGGCGGCGCCATGGTTGAAGAGGCAACTTTTGCGACGTC
ACGTGCCTTCAAACACGCATTCGAGCGCTGCATGATCGCACAGTCTAGGC
AGTGCCGGCTAGACAAGCGGATTATTGGCGGTCGGGGCAAGCTCCACCGC
TGCACGGGAGCAATCGTCAACGGGAAAGCGACATCCGGCTGCCCGGTGCT
TGCGCGGGGGTGCAAGCAAACCGATGGCACCTGGAAGGTGACGGAGGTGG
TCCTCGATCATGTGGCGTGCACCGGCCAGGCCAGTAACAAAAAGCAGCGG
ATCAATCGCCGATGTGTGGAGAGGGAGGCAGCGGCGCTCGTGAGCGCCAA
CCACAGGATCACCTGTCCCTCGCTGGTGAAGACGCTCAAGGCAACCTCCG
GCGTGGATGTCAGCGAGAGGACAGCTAGCAGGATGCGGGCGGACATCCTC
GGCAAGGGAAAGGACGCGATCGCCAAGGAGTACCAACTCCTCCAGAGCTA
CTGCGACCTCCTCGGGAGGGACAACGGCANNNNN
back to top

Coding sequence (CDS) from alignment at Scaffold_385:220121..221254-

>EsuBft1026_3a-0001 ID=EsuBft1026_3a-0001|Name=EsuBft1026_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=915bp|location=Sequence derived from alignment at Scaffold_385:220121..221254- (Ectocarpus subulatus male Bft15b)
ATGGCATCTTTCGTATCCATGACTGCCGACTGCGGACCGACCGAGGAGGA
ACATGTCAGACACATGCCAGGCCCCTCCGGTACCGGAACGGGAGGATATC
AGGCACAAAAAGATGCCGGCAGTAAGCCCGGCAAGGAATGCACTATAACA
ACACACGCCACAAACAAATGCGTGACACACAACGGACAACAAAACCAACG
GGTCGAACCTACAGGTCGCGCAAACAGAACAAAACGACGCGCATTGAGCA
ACAATACTCACACACACGAAAGCATCAACCGCCACCATGACGAGTGCACA
CCGACTCGTCACGGCAGCAGTAGGATGTCGAGGCAGTTTGCTCTGCAGGG
CGCTCGCTCAGGGTCAAGCGGGGGTGCACCTCTGTCAACTGCTGGCGGCG
CCATGGTTGAAGAGGCAACTTTTGCGACGTCACGTGCCTTCAAACACGCA
TTCGAGCGCTGCATGATCGCACAGTCTAGGCAGTGCCGGCTAGACAAGCG
GATTATTGGCGGTCGGGGCAAGCTCCACCGCTGCACGGGAGCAATCGTCA
ACGGGAAAGCGACATCCGGCTGCCCGGTGCTTGCGCGGGGGTGCAAGCAA
ACCGATGGCACCTGGAAGGTGACGGAGGTGGTCCTCGATCATGTGGCGTG
CACCGGCCAGGCCAGTAACAAAAAGCAGCGGATCAATCGCCGATGTGTGG
AGAGGGAGGCAGCGGCGCTCGTGAGCGCCAACCACAGGATCACCTGTCCC
TCGCTGGTGAAGACGCTCAAGGCAACCTCCGGCGTGGATGTCAGCGAGAG
GACAGCTAGCAGGATGCGGGCGGACATCCTCGGCAAGGGAAAGGACGCGA
TCGCCAAGGAGTACCAACTCCTCCAGAGCTACTGCGACCTCCTCGGGAGG
GACAACGGCANNNNN
back to top