EsuBft5106_2a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft5106_2a-0001
Unique NameEsuBft5106_2a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_385contigScaffold_385:1691..3714 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FJG2
ProteomeIdEsuBft5106_2
Ownerapollo_admin@sb-roscoff.fr
Nb exon1
Max annot lvl2759|Eukaryota
Length202
Hectar predicted targeting categoryother localisation
Evalue1.82e-07
EggNOG OGsCOG5027@1|root,KOG2747@2759|Eukaryota
Date last modified2016-06-14
Date creation2016-06-14
Preferred nameKAT8
KEGG koko:K11308
GOsGO:0000075,GO:0000077,GO:0000123,GO:0000228,GO:0000775,GO:0000776,GO:0000803,GO:0000805,GO:0002376,GO:0002520,GO:0003674,GO:0003676,GO:0003682,GO:0003723,GO:0003729,GO:0003824,GO:0004402,GO:0004468,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005667,GO:0005694,GO:0005700,GO:0005705,GO:0006139,GO:0006259,GO:0006281,GO:0006325,GO:0006355,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006807,GO:0006950,GO:0006974,GO:0006996,GO:0007154,GO:0007165,GO:0007275,GO:0007549,GO:0008080,GO:0008134,GO:0008150,GO:0008152,GO:0009047,GO:0009314,GO:0009628,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009894,GO:0009987,GO:0010212,GO:0010468,GO:0010485,GO:0010506,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010941,GO:0016043,GO:0016407,GO:0016410,GO:0016456,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0023052,GO:0030097,GO:0030099,GO:0030154,GO:0030330,GO:0031056,GO:0031248,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031329,GO:0031399,GO:0031570,GO:0031974,GO:0031981,GO:0032268,GO:0032501,GO:0032502,GO:0032991,GO:0033043,GO:0033044,GO:0033554,GO:0034212,GO:0034641,GO:0034708,GO:0035064,GO:0035065,GO:0035097,GO:0035556,GO:0036211,GO:0040029,GO:0042393,GO:0042770,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043967,GO:0043981,GO:0043982,GO:0043984,GO:0044093,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044422,GO:0044424,GO:0044427,GO:0044428,GO:0044446,GO:0044451,GO:0044464,GO:0044545,GO:0044665,GO:0045786,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0046483,GO:0046536,GO:0046972,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048534,GO:0048583,GO:0048731,GO:0048856,GO:0048869,GO:0050789,GO:0050794,GO:0050896,GO:0051090,GO:0051091,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051246,GO:0051252,GO:0051253,GO:0051254,GO:0051276,GO:0051716,GO:0051726,GO:0060255,GO:0060548,GO:0061733,GO:0065007,GO:0065009,GO:0070013,GO:0071214,GO:0071339,GO:0071478,GO:0071479,GO:0071704,GO:0071840,GO:0072331,GO:0072487,GO:0080090,GO:0080134,GO:0080135,GO:0090239,GO:0090304,GO:0097159,GO:0098687,GO:0104004,GO:0140030,GO:0140034,GO:1901360,GO:1901363,GO:1901564,GO:1901983,GO:1902275,GO:1902493,GO:1902494,GO:1902562,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1990234,GO:1990904,GO:2000112,GO:2000113,GO:2000756,GO:2000873,GO:2001020,GO:2001141
EC2.3.1.48
Descriptionhistone acetyltransferase activity
COG categoryB
BRITEko00000,ko01000,ko03036
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft5106_2aEsuBft5106_2aEctocarpus subulatus male Bft15bgeneScaffold_385 1691..3714 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft5106_2a-0001-exonEsuBft5106_2a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_385 1691..3714 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft5106_2a-0001-exonagat-three_prime_utr-17461Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_385 1691..2701 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft5106_2a-0001-cdsEsuBft5106_2a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_385 2702..2920 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft5106_2a-0001-exonagat-five_prime_utr-11090Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_385 2921..3714 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft5106_2a-0001EsuBft5106_2Ectocarpus subulatus male Bft15bpolypeptideScaffold_385 2702..2920 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft5106_2a-0001 ID=EsuBft5106_2a-0001|Name=EsuBft5106_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2024bp|location=Sequence derived from alignment at Scaffold_385:1691..3714- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TGCTGCTGCTGCTGGTTGATCCTGTCGCTCGTGTGGTGTTATCCGCAATG
GTGCTTCTTGCGCTTGCAGCAGCAACGCCCTGCCTCTGCTCTTTGCCGGC
GACCCACAACCTCGTTCCTACTCCCCGGGATGACCATGGACGCTTGGTAC
TGTTGCTGCTGCCACTACGCTCGTGCTGGACGCCGTAAACGGCCTCAAGG
CTCCACCTGACCTTTCTGCTCGCCTGGCGGTTGTCGCAAGGGCAGGCGCT
GGTGGTGCTGCCTCTGGTGCAGGTACTTGAACGACGTGGCCACATTCCCG
GAACTTCTGCAACGAAGGATCTCGCCACCTGAGCAAGGAAAAAGGCCGTC
GCCAGCTGCAACAGCATCCGTACCTCGCCGAAGTAGCCGGGGACGACGAC
GCTGCTGCTGCCGCCGTGGGCGCCACGGCCGCGCCTGTTTTGTTTCATGA
TCACAGCTGCTTTTCAAATTGAAACTTTTCACCTTCTCAATTGCTACAGC
AGGATTGCAGAAGGCTCTGTTCTCATGTCGCAGCTTTATCCGCGCACAAG
TCGTTCATTCAGGGTGATCTACGCTTCAAGAGAAGAAGATCACGAGAGAG
ACACACACGCCACCCGGCACAGCCCTGCGCAGTGCTCACGGCACCAAGCA
AGTGACTAGACTGTAAAAACAAAAAAAAATGGGGCTCCGCGAAATCAAAG
CGCGGCACGCGCAGCTACACGGCGCGCGCGCTGTGAGGGGCGCCGATCCA
CACCGCACGCACCCTTATAAAGCAGGGTGTCGCGAACAAAAAGCATGCCT
CAAAGGACTTCGACAACGAACCCGTCATCACTGGAGGTGCTGGTGGAGGG
CGGCGCCTCCAAGACGGAGAATGAAGAAGTAATCCCCCAGGCAAGTGATT
CCACCGCCCATTTGAAGCGATGTCGTTCTCCCCTGTCGCGAACTAACGTT
GTTGATTTCCCGTTGGCCATGCGCAAGTGTAGGTTGACCCGAGGTGTCAG
CATGAATCGTTAGCACTAGACATCCCTCTCCGTTTGTACGCACAAGAACT
CGAGCATTCGTACGTATCACTCCTCCCAGTACGTATCTTCTCTAAATCAT
TTACGTTTAGTTTACAACAGCAGTGTGGTGGGCCAGTCTACTGCTGTATC
GTTGGAAACTCAAACTTGTCATGAGGTGTGCTTCCAGCACGTTCCATTGC
CAATTATCAAGAACGATAGACTAGGTTGACATACCTCGTTCATGTTTTTA
ATCAACGCCAGCGGAAGAAAGGACCGCTGTTTCGCACCAGCGTTCCAGAG
CACCAAGTTGTTTTTGCTACTTGAGACAACACCCCCCACACACACCACGT
TGATAACCTGTTTAGTATGTAATTGTCACCTCCGGATGTGTTTTTGATGT
GGGTGGTATTTTTTTGCAGCCCTTATTGCTTGATGCAAGTCTAGAATTGT
GTTGTGGGGTCATGTTGACCCTTCAAATCATCACCACTAGGTGTGGTGTT
GTGTTGAGGGCAGTGTTGTAATACTTATGTGGGTGTGTTGTCTTGTGTCA
TACTTCGTACATACGATTTCGACAACCACAAGCGGCGAAACTGTCGCGCA
ATGACTACCATGGTGCAATGAAGATTTAGCAACACACCTGCCGGAAATAG
AACCATTGTGTACATATATTGACAAATCTGATCACCTGTCCACGCTGTCG
TCGCTCGAAGCCGCCACCGGAGAGCGCTCCGATCCGGAGCGTTGAGCAAG
AAAATGGACAACAATCGCCGCTCTTCTGTGGTGCTGTCTCAGCTGTCTAC
TACGAGGAGACCGAGTGTACTCTGGATATCGTTGGCTGCACAGGCCTTGA
CTTCCCCACTGTCCCGCGAGCTTGAAGATTTAGGAACAACACTGCTGTGG
TTGCTGCGCCTACTTGAATAGTATGAACTATTTCGACCTGCACATAACAT
ACACGCGGCACCTGTTTGCTCGAAAACGAATGCATGGCACCGCCAGGCCC
ACGCGTATCATTCATGTCGTCGAT
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protein sequence of EsuBft5106_2a-0001

>EsuBft5106_2 ID=EsuBft5106_2|Name=EsuBft5106_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=72bp
MPQRTSTTNPSSLEVLVEGGASKTENEEVIPQASDSTAHLKRCRSPLSRT
NVVDFPLAMRKCRLTRGVSMNR
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mRNA from alignment at Scaffold_385:1691..3714-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft5106_2a-0001 ID=EsuBft5106_2a-0001|Name=EsuBft5106_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2024bp|location=Sequence derived from alignment at Scaffold_385:1691..3714- (Ectocarpus subulatus male Bft15b)
TGCTGCTGCTGCTGGTTGATCCTGTCGCTCGTGTGGTGTTATCCGCAATG
GTGCTTCTTGCGCTTGCAGCAGCAACGCCCTGCCTCTGCTCTTTGCCGGC
GACCCACAACCTCGTTCCTACTCCCCGGGATGACCATGGACGCTTGGTAC
TGTTGCTGCTGCCACTACGCTCGTGCTGGACGCCGTAAACGGCCTCAAGG
CTCCACCTGACCTTTCTGCTCGCCTGGCGGTTGTCGCAAGGGCAGGCGCT
GGTGGTGCTGCCTCTGGTGCAGGTACTTGAACGACGTGGCCACATTCCCG
GAACTTCTGCAACGAAGGATCTCGCCACCTGAGCAAGGAAAAAGGCCGTC
GCCAGCTGCAACAGCATCCGTACCTCGCCGAAGTAGCCGGGGACGACGAC
GCTGCTGCTGCCGCCGTGGGCGCCACGGCCGCGCCTGTTTTGTTTCATGA
TCACAGCTGCTTTTCAAATTGAAACTTTTCACCTTCTCAATTGCTACAGC
AGGATTGCAGAAGGCTCTGTTCTCATGTCGCAGCTTTATCCGCGCACAAG
TCGTTCATTCAGGGTGATCTACGCTTCAAGAGAAGAAGATCACGAGAGAG
ACACACACGCCACCCGGCACAGCCCTGCGCAGTGCTCACGGCACCAAGCA
AGTGACTAGACTGTAAAAACAAAAAAAAATGGGGCTCCGCGAAATCAAAG
CGCGGCACGCGCAGCTACACGGCGCGCGCGCTGTGAGGGGCGCCGATCCA
CACCGCACGCACCCTTATAAAGCAGGGTGTCGCGAACAAAAAGCATGCCT
CAAAGGACTTCGACAACGAACCCGTCATCACTGGAGGTGCTGGTGGAGGG
CGGCGCCTCCAAGACGGAGAATGAAGAAGTAATCCCCCAGGCAAGTGATT
CCACCGCCCATTTGAAGCGATGTCGTTCTCCCCTGTCGCGAACTAACGTT
GTTGATTTCCCGTTGGCCATGCGCAAGTGTAGGTTGACCCGAGGTGTCAG
CATGAATCGTTAGCACTAGACATCCCTCTCCGTTTGTACGCACAAGAACT
CGAGCATTCGTACGTATCACTCCTCCCAGTACGTATCTTCTCTAAATCAT
TTACGTTTAGTTTACAACAGCAGTGTGGTGGGCCAGTCTACTGCTGTATC
GTTGGAAACTCAAACTTGTCATGAGGTGTGCTTCCAGCACGTTCCATTGC
CAATTATCAAGAACGATAGACTAGGTTGACATACCTCGTTCATGTTTTTA
ATCAACGCCAGCGGAAGAAAGGACCGCTGTTTCGCACCAGCGTTCCAGAG
CACCAAGTTGTTTTTGCTACTTGAGACAACACCCCCCACACACACCACGT
TGATAACCTGTTTAGTATGTAATTGTCACCTCCGGATGTGTTTTTGATGT
GGGTGGTATTTTTTTGCAGCCCTTATTGCTTGATGCAAGTCTAGAATTGT
GTTGTGGGGTCATGTTGACCCTTCAAATCATCACCACTAGGTGTGGTGTT
GTGTTGAGGGCAGTGTTGTAATACTTATGTGGGTGTGTTGTCTTGTGTCA
TACTTCGTACATACGATTTCGACAACCACAAGCGGCGAAACTGTCGCGCA
ATGACTACCATGGTGCAATGAAGATTTAGCAACACACCTGCCGGAAATAG
AACCATTGTGTACATATATTGACAAATCTGATCACCTGTCCACGCTGTCG
TCGCTCGAAGCCGCCACCGGAGAGCGCTCCGATCCGGAGCGTTGAGCAAG
AAAATGGACAACAATCGCCGCTCTTCTGTGGTGCTGTCTCAGCTGTCTAC
TACGAGGAGACCGAGTGTACTCTGGATATCGTTGGCTGCACAGGCCTTGA
CTTCCCCACTGTCCCGCGAGCTTGAAGATTTAGGAACAACACTGCTGTGG
TTGCTGCGCCTACTTGAATAGTATGAACTATTTCGACCTGCACATAACAT
ACACGCGGCACCTGTTTGCTCGAAAACGAATGCATGGCACCGCCAGGCCC
ACGCGTATCATTCATGTCGTCGAT
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Coding sequence (CDS) from alignment at Scaffold_385:1691..3714-

>EsuBft5106_2a-0001 ID=EsuBft5106_2a-0001|Name=EsuBft5106_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=219bp|location=Sequence derived from alignment at Scaffold_385:1691..3714- (Ectocarpus subulatus male Bft15b)
ATGCCTCAAAGGACTTCGACAACGAACCCGTCATCACTGGAGGTGCTGGT
GGAGGGCGGCGCCTCCAAGACGGAGAATGAAGAAGTAATCCCCCAGGCAA
GTGATTCCACCGCCCATTTGAAGCGATGTCGTTCTCCCCTGTCGCGAACT
AACGTTGTTGATTTCCCGTTGGCCATGCGCAAGTGTAGGTTGACCCGAGG
TGTCAGCATGAATCGTTAG
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