Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft937_11 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 52 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft937_11a-0001 ID=EsuBft937_11a-0001|Name=EsuBft937_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=527bp|location=Sequence derived from alignment at Scaffold_376:154460..155975- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGCAGCGCACCCTTCATGCGACTCGCCGAATATCTCACGGCGCTTCGCG
CTTGGTGATGGATGCGGGGTCAATGGTCTAACGACTACGGCATGCACGAC
TACGAGTACACCCCCCCCAACCAATAGACCAAGCCACCGTATTCGTACAG
ACTCCACCATCCCGAGAGCACGTGCAGATTATGGCGCACAGTCATACGCT
AGAGGTCCCGCCCGTCGCGAACGGCAGAGAAACGACCTAACGGGCCGCCG
TCCCTTCGAGGGGCAGTTCCGCCAACTCCGAAGTAAAGCCAAAGCCACAA
AGTCAGTGCGTGATGACACGCACACCTCCGAGCTCCTGAATCTTGTACTT
GAAGACCGAGTCCAGGCACGTGATGAAGAACTTGCCTACCTTGAGGACCC
CGAGCTCTCTGCAGTCCGTCATCGTAGATGCACCGACAAGAGCATCCAAA
CGCGAGACATCCGAAAACCGGAACAAACAAAGGAATCGCGCAAAACGGCA
CGGCAGTGCGAAGTATAACTTGTTTAA back to topprotein sequence of EsuBft937_11a-0001 >EsuBft937_11 ID=EsuBft937_11|Name=EsuBft937_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=26bp
MQRTLHATRRISHGASRLVMDAGSMV back to topmRNA from alignment at Scaffold_376:154460..155975- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft937_11a-0001 ID=EsuBft937_11a-0001|Name=EsuBft937_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1516bp|location=Sequence derived from alignment at Scaffold_376:154460..155975- (Ectocarpus subulatus male Bft15b)
ATGCAGCGCACCCTTCATGCGACTCGCCGAATATCTCACGGCGCTTCGCG
CTTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCGGCGTGCTCCGTCCC
GGCTTTGTAGGGATGCGGGGTCAATGGTCTAACGACTACGGCATGCACGA
CTACGAGTACACCCCCCCCAACCAATAGACCAAGCCACCGTATTCGTACA
GACTCCACCATCCCGAGAGCACGTGCGTGATTGGTAGAGGCTTACCCATT
AGACTACTCAGTCAGCGCTGACTGAGTAGTCTAATGGGTAAGCCTCTCGC
TGACTGAGTCAGAAACTCCACTCAACTCTAGAACAATAGCCTCATTGGCT
AGACATCAATAACCATCCCCGATCATACCAGTTATACTTCTTCGAACTTC
AGTGAACTTGTTGCCCCCCAGCCTAGAACATCATCCATTGAGAAAAACCA
TAGGCAAAAATGTAAAATGTTGCCACCCCAGTTGTTTGATCACACACAAA
ATAAACCCGAACACCAAGATATTAATCCATACTCATCACGTAGTTACGAT
GAAACTCAAAATCTCCCGCGTGAAGTGCTTTCGTGAGAAAGTCAGCATGT
TGATACGCCGATTCCACGTGAAAAATCGAAATCTCCTTCCTGCCTACCAG
TTCCCTGATAAAGTGGTGCCTTACNGTGCGTAGAGATTATGGCGCACAGT
CATACGCTAGAGGTCCCGCCCGTCGCGAACGGCAGAGAAACGACCTAACG
GGCCGCCGTCCCTTCGAGGGGCAGTTCCGCCAACTCCGAAGTAAAGCCAA
AGCCACAAAGTCAGTGCGTGATGACACGCACACCTCCGAGCTCCTGAATC
TTGTACTTGAAGACCGAGTCCAGGCACGTGATGAAGAACTTGTTCTGCAG
CCACAAGACACAGAGAGAGATCGGTTACAGGGCAGCTGAGACCACTTCAC
AATACATAAGGGGGGGTCATGAGAAACGGTTGTGTCGGTATTGCTTCTCT
TGCCAGAGCGCTGGGTTGCCCGTGCTGTGCGCTCGCACGACACGTAGGTA
GGGTTGTGATTCACATACTAAACAACCAACAACCCACACGAGCATGTACA
GCGCAGAGGGTACTGCTGTGCAAGCTGTTGACCTGCTGGCGCACAATAAA
TTCCAAAGGTATTGTGGAGCCCCCTGCTTGAAAAGTGCTAGAGGCGCCTG
AAAGACAACCGAATGAGGTGGACGCTGTTGGCAAAAGAAGAGGCACGTCC
GCCGTGCATGGCCCCTGGCTCGTGGAAAACGTAGCAACCAACAAGGTGTG
GATTCGCCCGCTATTGGACTTGGCGGGCACTGCCACAGGGCGGCATCCAC
CCTCGCGCTGCCAACATGTCAGGCCTACCTTGAGGACCCCGAGCTCTCTG
CAGTCCGTCATCGTAGATGCACCGACAAGAGCATCCAAACGCGAGACATC
CGAAAACCGGAACAAACAAAGGAATCGCGCAAAACGGCACGGCAGTGCGA
AGTATAACTTGTTTAA back to topCoding sequence (CDS) from alignment at Scaffold_376:154460..155975- >EsuBft937_11a-0001 ID=EsuBft937_11a-0001|Name=EsuBft937_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=81bp|location=Sequence derived from alignment at Scaffold_376:154460..155975- (Ectocarpus subulatus male Bft15b)
ATGCAGCGCACCCTTCATGCGACTCGCCGAATATCTCACGGCGCTTCGCG
CTTGGTGATGGATGCGGGGTCAATGGTCTAA back to top
|