EsuBft1013_5a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Cross References

External references for this mRNA


Database	Accession
GO	0005975
GO	0044281
GO	0003824
GO	0008610
GO	0003333

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_373:553050..558394+
coding sequence from alignment at Scaffold_373:553050..558394+

spliced messenger RNA

>EsuBft1013_5a-0001 ID=EsuBft1013_5a-0001|Name=EsuBft1013_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1971bp|location=Sequence derived from alignment at Scaffold_373:553050..558394+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCTGCTTCGCTCATTTTCAGGTTGAATTTCATTCTGGTCGACCATGC
GCTCTCGAAAACTTCGGTTTCGGAGATTGCGCACCTCCTTCGAGTAGAGT
GGGGCCTGAGCAAGGGCGACCGAGTCGTGCTGGCATTCGATTTCGGCCTG
CGCTTCTTCGCGGTCTTCCTCGGCTGCTTGAGAGCCGGCATCATCGCCGT
GCCGGTGTACCCGCCCAACCCGGCCACGCTCAAGAAGTCTCTCAAGAAGC
TGCAGCTCATCGTCGACGACTGTGCACCCAAGATGGCCCTCGTGTGCCCG
CTCGTCAACAAGCTCCGCCTCGCGTCGAAGCTGCGGGCGGTGGCGACGGG
GAAAAGCGGCTGGCCGGACTTGACATACCACTGCCCCGACGTCAAAGAGG
AGAAGATCGCCACGGGTGGCATGTCTTCATCTGGCGTTGGGTGGAGGAGT
GGTGGTGGCAGGTCGGCGGACGTCAAAAGGACGCGACCGAGCTTCGACGA
CCCGACCATCAAGCCGCAAGACGTGGCCTTCCTGCAGTTCACCTCAGGGA
GCACCTCGGATCCGAAGGGGGTCATGCTCACGTACGGCAACCTCACCCAC
AACATCGGAGTCATCGTCAACTCCTCGAACGCGCAAATCGCCGCACGAGG
AGAGGTCGCGGATGGCCAACGTACCTGGTTCTCCTGGCTGCCGACCTTCC
ACGACATGGGGCTCATCCAGGGAACTCTGGCGCCATTCGTCGCCGGATGG
ACGGCCGCGTACTGCTCTCCCATCACCTTCATGCGACGGCCTCTGGTGTG
GCTGGAACTCATGTCCAAGGAGAAGTCGCAGATGACGGCTGCTCCGGACT
TCGCGTTCCGACTCTGCCTGCGGAAGTGGGAGGAGATGTCGCCAGAGAGC
CGGACGGCACTACACCTGGACCTGAAGCACATCATGTTCATGCAGAACGC
AGCCGAGCCCGTGCGCTCTAGCACTGTTCGCGACTTCGCCGAAGCGTTCG
CTGCCGTGGGCCTGCCGGGATACGCCTCCAATGCGGCGTACGGCCTCGCC
GAGCACACTGTCGGATGCGCGTCCTTCAGCCCTAACCCGGGAGGAGGGGG
CTTGAGACACGTACCTGACGAACGGCTGCAGGCTTCAGGGGATATTCACT
TCTCGGCCAGCCTCCACATGGATATCAAGATCGTCGATCCCGAGACCTGC
CGGGAAGTTCCCACTGGGGAGACGGGGGAGATGTGGATATCGTCGGACTC
TGTCGCTGCGGGCTACTGGGGCAAGCCCGAGCTGACCCGGGGGACCTTCC
GTGCACGGATCAAGTATGACAGTGCCGACGGGTCTCTTTCCCCTCCGTGG
GCCAATTCGGAGTTTCTGCGCACCGGAGACCTATGCCGTGTCGACGCCGA
AGGCCTTCTCTACGTCGAAGGCCGCCTAAAAGACCTCGTCATCGTTGCTG
GGCGCAACATCTACCCTCAGGACATTGAGTTCGTCGCCCAAGATGCGTCT
TCTCTGGTCCGCCCAGGGTGCATTGCGGTCTTCTCAGAGACAGAACTCGG
CGGCGGCTTAGAGATCGTGATGGAGGTGCGAAGCTTGTCCAAGAAGAACG
TCCATGCAGTTACGGAAGCGCTAGAAGCCGTGCGCCGCAGCGTCATGAGC
GAATCGGGACTCGCACCTTCCAGGGTGGTCGCCATCAAAGAGAGGACGAT
TCCGAAGACTACCTCCGGAAAGATTCAGCGACGCAAGACGAGAGCGATGC
TCCACGCGGGCGCCCTAGAGGTGGTGCAGGAGCTTCGTTTCGATCCCGTA
GAAACGCCCCCGCCTGCTGTTCGTGGCCCCGCTCCGCTGAGCGACCGTGA
GGAATCATCGGCCACAGCACCCACTGCCGTGTCTGCTGCAGAAAGGGCGC
TGCATTTTGCGTCCTCTTCAAAACTCTCGCCTCAAACGGCTGATGGCAAC
ACGAGCACGGTGCGTTTGTAA

protein sequence of EsuBft1013_5a-0001

>EsuBft1013_5 ID=EsuBft1013_5|Name=EsuBft1013_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=656bp
MPASLIFRLNFILVDHALSKTSVSEIAHLLRVEWGLSKGDRVVLAFDFGL
RFFAVFLGCLRAGIIAVPVYPPNPATLKKSLKKLQLIVDDCAPKMALVCP
LVNKLRLASKLRAVATGKSGWPDLTYHCPDVKEEKIATGGMSSSGVGWRS
GGGRSADVKRTRPSFDDPTIKPQDVAFLQFTSGSTSDPKGVMLTYGNLTH
NIGVIVNSSNAQIAARGEVADGQRTWFSWLPTFHDMGLIQGTLAPFVAGW
TAAYCSPITFMRRPLVWLELMSKEKSQMTAAPDFAFRLCLRKWEEMSPES
RTALHLDLKHIMFMQNAAEPVRSSTVRDFAEAFAAVGLPGYASNAAYGLA
EHTVGCASFSPNPGGGGLRHVPDERLQASGDIHFSASLHMDIKIVDPETC
REVPTGETGEMWISSDSVAAGYWGKPELTRGTFRARIKYDSADGSLSPPW
ANSEFLRTGDLCRVDAEGLLYVEGRLKDLVIVAGRNIYPQDIEFVAQDAS
SLVRPGCIAVFSETELGGGLEIVMEVRSLSKKNVHAVTEALEAVRRSVMS
ESGLAPSRVVAIKERTIPKTTSGKIQRRKTRAMLHAGALEVVQELRFDPV
ETPPPAVRGPAPLSDREESSATAPTAVSAAERALHFASSSKLSPQTADGN
TSTVRL

mRNA from alignment at Scaffold_373:553050..558394+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft1013_5a-0001 ID=EsuBft1013_5a-0001|Name=EsuBft1013_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5345bp|location=Sequence derived from alignment at Scaffold_373:553050..558394+ (Ectocarpus subulatus male Bft15b)
ATGCCTGCTTCGCTCATTTTCAGGTTGAATTTCATTCTGGTCGACCATGC
GCTCTCGAAAACTTCGGTTTCGGAGGTACGAGTGTAAGCGAAGTGGATAC
TGTGTAAGGATTGCAGCAGCATATTTCTCGTCGCTCGCTCGCCAGGTCTT
TGAATCCTGCTTGAGTACGGTAGTTGCCCGGAGATAAGAGACGTCAGTTT
CAGGTCGACCCTCAGTGCCTTTGTTCGTCACCGGCGTTGAGTCGAGGTTA
TTCTACATAGTAGGTTAAGTGGTGGAACCTCGGGTGGACTGTGTTCTTGG
TCCAAACATTGCTCGTATCTGTCGGTAACACTTGAGCCATATGTTCTCGA
CGGCCTTTGCTCCACCTGCGACACCAGAGGGTCGTTTCCCGGGGGGACCT
TATTCCATCGCCCCCCGCCCGTGCACAGTAGATATCCTGTGTAGCGAGGC
CCCAGGATTAAACCGTCTCTGCGTTTTCTGCTTGCCCCCCTCCCTCAGAT
TGCGCACCTCCTTCGAGTAGAGTGGGGCCTGAGCAAGGGCGACCGAGTCG
TGCTGGCATTCGATTTCGGCCTGCGCTTCTTCGCGGTCTTCCTCGGCTGC
TTGAGAGCCGGCATCATCGCCGTGCCGGTGTACCCGCCCAACCCGGCCAC
GCTCAAGAAGTCTCTCAAGAAGCTGCAGCTCATCGTCGACGACTGTGCAC
CCAAGATGGCCCTCGTGTGCCCGCTCGTCAACAAGCTCCGCCTCGCGTCG
AAGCTGCGGGCGGTGGCGACGGGGAAAAGCGGCTGGCCGGACTTGACATA
CCACTGCCCCGACGTCAAAGAGGAGAAGATCGCCACGGGTGGCATGTCTT
CATCTGGCGTTGGGTGGAGGAGTGGTGGTGGCAGGTCGGCGGACGTCAAA
AGGACGCGACCGAGCTTCGACGACCCGACCATCAAGCCGCAAGACGTGGC
CTTCCTGCAGTTCACCTCAGGGAGCACCTCGGATCCGAAGGGGGTCATGC
TCACGTACGGCAACCTCACCCACAACATCGGAGTCATCGTCAACTCCTCG
AACGCGGTGAGATACGAAGAAATCAAATATCTGCGCCTGCTATGTACGAT
TTCATGTACTCGTGAAATCCGCAATGTCCGTTCTTCACTACCCGGAAAGA
GGAATTGAATGCGTGACCCCTACGCCATCCGGTAGACCAAGTGAATGAAT
GTGGTTGCACACAGAGAGCGAAGTCTTGTCTGGTACTATCGAGGGCATTT
TTTTTCTCAACAATGTATGCTGATGGCCTATCGCGGCTGCAGTGGTAAAG
GCTTGCTATCTAGCCGTTGTTCAGCGGTGTGTCGATGAGCTAACGTATCA
TAGTCGACTTTTTCCGGAGGATGGCCCAGAGATCGCGTAGTAGAAGGAGT
TCAAGAAGATAGACCTTTTCGTTCGCGCGTGCCAACCATTGGCGGGTTCT
GGGCATTCGTTCCTTCTCTTGTCCTGCAACACTGAGTTTGAGCGAGCAGC
AATCTCAATTTCTTCGACTTCCGAACCTGAACCCCCCACCCTCGACACAC
CTACGACCCCGCGCGCCGTGCAGCAAATCGCCGCACGAGGAGAGGTCGCG
GATGGCCAACGTACCTGGTTCTCCTGGCTGCCGACCTTCCACGACATGGG
GCTCATCCAGGGAACTCTGGCGCCATTCGTCGCCGGATGGACGGCCGCGT
ACTGCTCTCCCATCACCTTCATGCGACGGCCTCTGGTGTGGCTGGAACTC
ATGTCCAAGGAGAAGTCGCAGATGACGGCTGCTCCGGACTTCGCGTTCCG
ACTCTGCCTGCGGAAGTGGTGAGAGGTTTTCAACTCTAGAAATTTTAGAA
GAGGCAAGAACACGGCAGCAAGAGTGTGAGGTTTCCGTCTAGAAGAGCAC
ATCACCTGCCGACACATGTCGTGGTTTCGACCAGCATATGCATCGCGACC
GGAACAAATCGTTGAATGGGTACTTTCCCTCGACTGCCCCGCACTGCAGA
TCAGAAGAATTTTTTTCGCCCGAGACGTTTCGATTACTATGCTTACGTCC
ATCACTAATTCGTCCCTCCGCTTCACCCGTAGGGAGGAGATGTCGCCAGA
GAGCCGGACGGCACTACACCTGGACCTGAAGCACATCATGTTCATGCAGA
ACGCAGCCGAGCCCGTGCGCTCTAGCACTGTGAGCCTGGCCGATTTGTCC
GGCGACATTTGTTGGTACCACCGTTGGCCCAGCTCGAAATTTCTGACCTC
GCCGCACCCACTACAGTGCCCCGTATCGTTGTTGTTGCTGTTATCGCTCA
GATTATGGTATATCGAAAAATCGCTCGGGATGTATACATATACCTCCTAC
ACTCTGCACTTGCAAAGTAGTAGAGAATCGGGCTTCTTTCGTCAAAAATC
ATCCGAAACAAGGCAACTTCAGAATCACAACAGCAACAACGACCCTGACC
AGAGTTCGAATACCGCACAGGAAGAAAATGAGTGAGTTCCACATCATGTG
CACAATGTCAAGACGAAGGGTTGGCAAGGGAGAACCAGAAAGCATGCTAG
CATATTGATCCCTCTACCTTAGTTTGGAGTCTATCCGTCAACGGACTCCT
TTGGAGTATCACAAGCGCTACGCAGAACGGCAAAAGAAGCACACGACATG
TTTGTTTTCGGCATGAGAAGCAGCTACACCAAAACGACAGAAAGCGAGAT
GAGTCCCCAACAAGCCCCACAACAATTCATTATTGATCCGCACCGTGGAA
GGTTCGCGACTTCGCCGAAGCGTTCGCTGCCGTGGGCCTGCCGGGATACG
CCTCCAATGCGGCGTACGGCCTCGCCGAGCACACTGTCGGATGCGCGTCC
TTCAGCCCTAACCCGGGAGGAGGGGGCTTGAGACACGTACCTGACGAACG
GCTGCAGGCTTCAGGGGATATTCACTTCTCGGCCAGCCTCCACATGGATG
TGAGATCTAGCCACAGCGCGTATCTTCAACATAATGCCATCCATACGAAC
GCTGGCGGAAAGTAATAGTGTTATTTTTTTTGCCGTAGGTTTTTGACGTC
TCTATCAAGGGCATCGCAAATCCTATCTTTAGGCGTTAAGGGATTGGGAA
ACTGGAAGATTGGGAAGTATTTTGTCGTTGCTCAAGCAAGAAGGGGGGCA
TCCTTTGGCGTGAAAAACGTATTCTGATTTGAAGTGCATGCACAGGGCCG
CAACATATCGTACAATACATGCAAGCAGGAGTACCTATTGAAGTTACACA
ACAAATGACCACCGCGGTTGATCCGTTGATATTGTCGATGGTGAAGAAAG
GCATCGACGTGTAGCTCTTTTACCCAAAAGCGACAACCGTGGACTTGGTC
CGGTGTAGGTTTCAGTTTTTTCCCGTGTTGCCTGCCTGCACACAGGCAGG
GCCGTCCACACTAGCGTTGTAGCCATCTCAGCCCTGAATCCCCGACCGTC
CTTAGCCAGTCCCCAAACAATGAAGTACAACGTCCTGACCAGACCATGCC
TCTCGTCCGCCCCGAAACGACCAACGGCATTGTGTGGGGTGGGCCTGGTG
CTGTTAATCTTTCGCGTCTCAACAGATCAAGATCGTCGATCCCGAGACCT
GCCGGGAAGTTCCCACTGGGGAGACGGGGGAGATGTGGATATCGTCGGAC
TCTGTCGCTGCGGGCTACTGGGGCAAGCCCGAGCTGACCCGGGGGACCTT
CCGTGCACGGATCAAGTATGACAGTGCCGACGGGTGAGGTTATATCAGAG
AGAGCAGGTTGCCACAGCCTTGGCGTTATTCCCGTCTCACTCTGAGGCGG
CCGTTTATGGTGTACACCCAGCCCGAGTTCGTCCATATCTTACACGTCTG
TGGATAGATAAGACTGTCATTGGAAATCTGTTATATATGGAAGGCCATGA
TTTCTTGCCGGTGTGCGGGGTGGTTGCGCTTGCTCTTTTCCCTCAGCGCC
CGTGAACCAGACCACATCGAATCCCAGGTCTCTTTCCCCTCCGTGGGCCA
ATTCGGAGTTTCTGCGCACCGGAGACCTATGCCGTGTCGACGCCGAAGGC
CTTCTCTACGTCGAAGGCCGCCTAAAAGACCTCGTCATCGTTGCTGGGCG
CAACATCTACCCTCAGGTGAACGTAGTCCAGGTTATGAACATGCACGTAT
AGGTTGGCTTTGCATTGTTCATGGATGGTCTGCGTCTTGAGTGTGTCGCT
CGATGGTTTTTCCCAGTCAACGTGCTCTTAATGCGTTCAAGATCAAGGTC
GAAACATCGATGGTGTTTCGGTATCTCCGCGGCGTTCCTACGAGCGCGAA
AGGTTTTTACCACAGTTGTTCGCAAATATCTCGCGGGCCACCCCTGGCTA
TGGATGTCATCCTAAACCGTTACTCTGCGCGCAGGACATTGAGTTCGTCG
CCCAAGATGCGTCTTCTCTGGTCCGCCCAGGGTGCATTGCGGTCTTCTCA
GAGACAGAACTCGGCGGCGGCTTAGAGGTGAGCTTCAGGCTATTGACACG
ACGTTTTTGGGCACCGGCAGGGCTGTGTTGTTCCACTCCACTTCTGGCCT
ACATATTTCAACTTGCCTACACTACTACTGCAATCTGCATCATATTGCTG
TGGATGGAAGATGAGGCAAATTCAGGGGGTCAAGATACCTACTGGTGTAT
TGAGGCGGACTGACCTCTGCTCCGTTTTGATTTGCTGATTCACAGATCGT
GATGGAGGTGCGAAGCTTGTCCAAGAAGAACGTCCATGCAGTTACGGAAG
CGCTAGAAGCCGTGCGCCGCAGCGTCATGAGCGAATCGGGACTCGCACCT
TCCAGGGTGGTGAGTGCGTTGTTTTCGTCACAAAACAAGAGCTTTCGAAA
GAGTCATCTCACCCGAAGTGGCACGGGAGTACTTGTCGAAGTGCATAGTC
GACACTGGATCAACGTCGCGAAAGGATCCAGCCGGAGTTTAGCTGAAACG
GTTCGTTCGCGTCTACGCAAGAACGGTCATGCTCTTGCCGGCGAACACCC
GCCTGCCCCCTGCTGCATCGCTGCCCGTGTTTGCCGCAAAACATGCGACA
GGTCGCCATCAAAGAGAGGACGATTCCGAAGACTACCTCCGGAAAGATTC
AGCGACGCAAGACGAGAGCGATGCTCCACGCGGGCGCCCTAGAGGTGGTG
CAGGAGCTTCGTTTCGATCCCGTAGAAACGCCCCCGCCTGCTGTTCGTGG
CCCCGCTCCGCTGAGCGACCGTGAGGAATCATCGGCCACAGCACCCACTG
CCGTGTCTGCTGCAGAAAGGGCGCTGCATTTTGCGTCCTCTTCAAAACTC
TCGCCTCAAACGGCTGATGGCAACACGAGCACGGTGCGTTTGTAA

Coding sequence (CDS) from alignment at Scaffold_373:553050..558394+

>EsuBft1013_5a-0001 ID=EsuBft1013_5a-0001|Name=EsuBft1013_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1971bp|location=Sequence derived from alignment at Scaffold_373:553050..558394+ (Ectocarpus subulatus male Bft15b)
ATGCCTGCTTCGCTCATTTTCAGGTTGAATTTCATTCTGGTCGACCATGC
GCTCTCGAAAACTTCGGTTTCGGAGATTGCGCACCTCCTTCGAGTAGAGT
GGGGCCTGAGCAAGGGCGACCGAGTCGTGCTGGCATTCGATTTCGGCCTG
CGCTTCTTCGCGGTCTTCCTCGGCTGCTTGAGAGCCGGCATCATCGCCGT
GCCGGTGTACCCGCCCAACCCGGCCACGCTCAAGAAGTCTCTCAAGAAGC
TGCAGCTCATCGTCGACGACTGTGCACCCAAGATGGCCCTCGTGTGCCCG
CTCGTCAACAAGCTCCGCCTCGCGTCGAAGCTGCGGGCGGTGGCGACGGG
GAAAAGCGGCTGGCCGGACTTGACATACCACTGCCCCGACGTCAAAGAGG
AGAAGATCGCCACGGGTGGCATGTCTTCATCTGGCGTTGGGTGGAGGAGT
GGTGGTGGCAGGTCGGCGGACGTCAAAAGGACGCGACCGAGCTTCGACGA
CCCGACCATCAAGCCGCAAGACGTGGCCTTCCTGCAGTTCACCTCAGGGA
GCACCTCGGATCCGAAGGGGGTCATGCTCACGTACGGCAACCTCACCCAC
AACATCGGAGTCATCGTCAACTCCTCGAACGCGCAAATCGCCGCACGAGG
AGAGGTCGCGGATGGCCAACGTACCTGGTTCTCCTGGCTGCCGACCTTCC
ACGACATGGGGCTCATCCAGGGAACTCTGGCGCCATTCGTCGCCGGATGG
ACGGCCGCGTACTGCTCTCCCATCACCTTCATGCGACGGCCTCTGGTGTG
GCTGGAACTCATGTCCAAGGAGAAGTCGCAGATGACGGCTGCTCCGGACT
TCGCGTTCCGACTCTGCCTGCGGAAGTGGGAGGAGATGTCGCCAGAGAGC
CGGACGGCACTACACCTGGACCTGAAGCACATCATGTTCATGCAGAACGC
AGCCGAGCCCGTGCGCTCTAGCACTGTTCGCGACTTCGCCGAAGCGTTCG
CTGCCGTGGGCCTGCCGGGATACGCCTCCAATGCGGCGTACGGCCTCGCC
GAGCACACTGTCGGATGCGCGTCCTTCAGCCCTAACCCGGGAGGAGGGGG
CTTGAGACACGTACCTGACGAACGGCTGCAGGCTTCAGGGGATATTCACT
TCTCGGCCAGCCTCCACATGGATATCAAGATCGTCGATCCCGAGACCTGC
CGGGAAGTTCCCACTGGGGAGACGGGGGAGATGTGGATATCGTCGGACTC
TGTCGCTGCGGGCTACTGGGGCAAGCCCGAGCTGACCCGGGGGACCTTCC
GTGCACGGATCAAGTATGACAGTGCCGACGGGTCTCTTTCCCCTCCGTGG
GCCAATTCGGAGTTTCTGCGCACCGGAGACCTATGCCGTGTCGACGCCGA
AGGCCTTCTCTACGTCGAAGGCCGCCTAAAAGACCTCGTCATCGTTGCTG
GGCGCAACATCTACCCTCAGGACATTGAGTTCGTCGCCCAAGATGCGTCT
TCTCTGGTCCGCCCAGGGTGCATTGCGGTCTTCTCAGAGACAGAACTCGG
CGGCGGCTTAGAGATCGTGATGGAGGTGCGAAGCTTGTCCAAGAAGAACG
TCCATGCAGTTACGGAAGCGCTAGAAGCCGTGCGCCGCAGCGTCATGAGC
GAATCGGGACTCGCACCTTCCAGGGTGGTCGCCATCAAAGAGAGGACGAT
TCCGAAGACTACCTCCGGAAAGATTCAGCGACGCAAGACGAGAGCGATGC
TCCACGCGGGCGCCCTAGAGGTGGTGCAGGAGCTTCGTTTCGATCCCGTA
GAAACGCCCCCGCCTGCTGTTCGTGGCCCCGCTCCGCTGAGCGACCGTGA
GGAATCATCGGCCACAGCACCCACTGCCGTGTCTGCTGCAGAAAGGGCGC
TGCATTTTGCGTCCTCTTCAAAACTCTCGCCTCAAACGGCTGATGGCAAC
ACGAGCACGGTGCGTTTGTAA