Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1844_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 65 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1844_3a-0001 ID=EsuBft1844_3a-0001|Name=EsuBft1844_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=657bp|location=Sequence derived from alignment at Scaffold_372:464958..465817+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
TGTGCGGTGCCCCCGGTGTGCATTTCCAAACGCAAAAAACCGATCGTGTC
CACGTTCGGAAATGCTCATCATTTCCAAACGCATGGCCGGTTGGAAACGT
GAAATCGAAAATGTTCAGGCGGAAAAGTGTCATTTCCGATCTTATAAGAA
ACAGTTTTTGGTCCGAATTTGGAAATTCACATTTTTGAACTGCATTTCCG
AACGTTCTAAGAAACCGCCTAAGAAACGTTTTTGCAGGCAGCATGTTGTT
TTTGGGGGGTTGGGAAATTACGCATTTTTCAACTGGATTTCCGAACGTTA
TAAGAGACAGCCTAAGGGTTCTCGGACCCGCACAAAATTTTCACGGGTAG
GTTTAGTACAGTAGAGTATGTTTAGTAGAGTATCGAGAATCTGTACTAAC
GGTTGAGTAGAGAGGTGAATACTCTAGTCACCTGAGTAGAGTACAGAGGT
TAGGTACTAAACTCAAAGAGTATATTTAGTAGAGTATGAAAAGCCGTACT
AAACCGCAAGAGTATGTTGAGTAGAGTATGAAGAGCCATACTATAAAGTG
AGTATGAGTAGAGTATGAAAAGCCGTACTATACTAAAAAAAAAGATGTTT
AGTAGAGTATTGAAGAGCCGTACTTACAAAAGTTTTAGTAGAGTACGAAG
AGCTGTA back to topprotein sequence of EsuBft1844_3a-0001 >EsuBft1844_3 ID=EsuBft1844_3|Name=EsuBft1844_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=100bp
MLIISKRMAGWKREIENVQAEKCHFRSYKKQFLVRIWKFTFLNCISERSK
KPPKKRFCRQHVVFGGLGNYAFFNWISERYKRQPKGSRTRTKFSRVGLVQ back to topmRNA from alignment at Scaffold_372:464958..465817+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1844_3a-0001 ID=EsuBft1844_3a-0001|Name=EsuBft1844_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=860bp|location=Sequence derived from alignment at Scaffold_372:464958..465817+ (Ectocarpus subulatus male Bft15b)
TGTGCGGTGCCCCCGGTGTGCATTTCCAAACGCAAAAAACCGATCGTGTC
CACGTTCGGAAATGCTCATCATTTCCAAACGCATGGCCGGTTGGAAACGT
GAAATCGAAAATGTTCAGGCGGAAAAGTGTCATTTCCGATCTTATAAGAA
ACAGTTTTTGGTCCGAATTTGGAAATTCACATTTTTGAACTGCATTTCCG
AACGTTCTAAGAAACCGCCTAAGAAACGTTTTTGCAGGCAGCATGTTGTT
TTTGGGGGGTTGGGAAATTACGCATTTTTCAACTGGATTTCCGAACGTTA
TAAGAGACAGCCTAAGGGTTCTCGGACCCGCACAAAATTTTCACGGGTAG
GTTTAGTACAGTAGAGTATGTTTAGTAGAGTATCGAGAATCTGTACTAAC
GGTTGAGTAGAGGTGAATACTCTAGTCACCTGAGTAGAGTACAGAGGTTA
GGTACTAAACTCAAAGAGTATATTTAGTAGAGTATGAAAAGCCGTACTAA
ACCGCAAGAGTATGTTGAGTAGNTTCTCGGACCCGCACAAAATTTTCACG
GGTAGGTTTAGTACAGTAGAGTATGTTTAGTAGAGTATCGAGAATCTGTA
CTAACGGTTGAGTAGAGGTGAATACTCTAGTCACCTGAGTAGAGTACAGA
GGTTAGGTACTAAACTCAAAGAGTATATTTAGTAGAGTATGAAAAGCCGT
ACTAAACCGCAAGAGTATGTTGAGTAGAGTATGAAGAGCCATACTATAAA
GTGAGTATGAGTAGAGTATGAAAAGCCGTACTATACTAAAAAAAAAGATG
TTTAGTAGAGTATTGAAGAGCCGTACTTACAAAAGTTTTAGTAGAGTACG
AAGAGCTGTA back to topCoding sequence (CDS) from alignment at Scaffold_372:464958..465817+ >EsuBft1844_3a-0001 ID=EsuBft1844_3a-0001|Name=EsuBft1844_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=303bp|location=Sequence derived from alignment at Scaffold_372:464958..465817+ (Ectocarpus subulatus male Bft15b)
ATGCTCATCATTTCCAAACGCATGGCCGGTTGGAAACGTGAAATCGAAAA
TGTTCAGGCGGAAAAGTGTCATTTCCGATCTTATAAGAAACAGTTTTTGG
TCCGAATTTGGAAATTCACATTTTTGAACTGCATTTCCGAACGTTCTAAG
AAACCGCCTAAGAAACGTTTTTGCAGGCAGCATGTTGTTTTTGGGGGGTT
GGGAAATTACGCATTTTTCAACTGGATTTCCGAACGTTATAAGAGACAGC
CTAAGGGTTCTCGGACCCGCACAAAATTTTCACGGGTAGGTTTAGTACAG
TAG back to top
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