Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1363_7 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 148 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1363_7a-0001 ID=EsuBft1363_7a-0001|Name=EsuBft1363_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1483bp|location=Sequence derived from alignment at Scaffold_372:419247..421089+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CATCCTGTTTCACCATGAACATGAGGACGACTCATGCCTCGTTCTCCACG
GCAATCGACTCCGCTTGATCGAACTACATGCAGAGGACACCACTCTCGAG
GTCTTCAGCCCTAAACTCCAACATCTACAGCCGTGCCGACTCGGGCCTGG
CCGTGGCTCGTTGCAGTCTCATGCTTGTAGACCGCATAATCCACGTCCGC
GGGGAAAAGAGGATAGTAAAGGCAGCACCGGAAGAAGCACAACCGCGGGA
TACTGTTAACCTCCTTGTTGTTAAAGAAGGCTACCACCAAGGCAGCTGGC
AGTATGTCGTCCTCTGTAGTTGCTGATGAAGATCAGCTCCACGAAAAGGG
TAGAGAGCATGCTGAAGCCATCCAGGAACGAGCATCAAAGCGTGGCAACC
AACAGGCTGCCGCTGCTGCTGCTGCTGCTGCTGCTGCGGGGAAGGGGAGG
CGCAAGGGGGCGGACGCAGCTCTCTCCAACCCTCTAGCATTGGCTCACGA
TGGCGGGACGAGAAGCGGGGCTACCCCAGAGGCTTCGCGCGAGGAGCAGG
CTTCGGAGGAGCGTCGCTCTAGCGCGCTGGAGTTGACCCAGAAAGACCAC
ATGTTGATGGAGCGAGTACGGGTCATGCTGGGGGCGAGCGCTGCAGACCA
GGCAGCAGCTAAGGAGGCGGTGGTCAACGCGGCGAACACTCGCGCGCTCC
GTGCCTCGCTCCAAGCGCTGAAGTGGCACAGCAACAGCTCGATAGGGTGG
ACCGCGTACACGACAGCGCTCGCCACAGCAGCGGGAGCGGGGGAGCACAC
GTGTCCTGACCCCAACCTGTGCCACCCTGGCAACCGGTGCAAGCCCGCTG
AGCCTGGTGGAGTGAGCTTTGCCGAGCGAGCCAAGAGTCTCGGCATTCGG
TACGAGACTTTCGGCGACGCACGTTTCCGGATGCACAACACGAACCACGA
CATCGCCCCCAGGGACGCTGTGAGTGACGGGTGCTACGTGTATAACGAGC
GCAAGACACGGAGTGACGTGACGAATCCCGAGGTAATGGCTCTCGCCAAG
GCTTTTTGGCACTCCGACGACGTTTCCCGTGCAACAGGAAATTCAGGCAA
GTTGCTGCGTCGCGCACGAGTTTCTGCTAGGCTACGCCGCGGAGGCGGAC
AAGGCGCGTGAAGGCCACTTCACAACCTGGTCCCCTTACCGGATCAAGAG
CTTCGAAGTCAGGAAGTTTGGCCCCAAGGAATTCCTCGCCCACCGATAGA
TCTGACGGGGATCCCTGGAAGTTCCAAGCTATACTTTTTCACGGGAACAG
AGGAGGAGCAGGAGGATGTGCAGGATACCTGTAGTCTTGTGTGGGCTACA
AGTGTGGGGGTGCAGACAGACGATTCTGGGGTGGAAGCGGCCGGAGGTAA
GGTGTTGACGGCTAGGAAGTGGGTGGTAGACGAGTCCAGGGCGAGGAAAT
GGACCGCCCCCAAGAACTTCACCAGATCTTGGA back to topprotein sequence of EsuBft1363_7a-0001 >EsuBft1363_7 ID=EsuBft1363_7|Name=EsuBft1363_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=285bp
MSSSVVADEDQLHEKGREHAEAIQERASKRGNQQAAAAAAAAAAAGKGRR
KGADAALSNPLALAHDGGTRSGATPEASREEQASEERRSSALELTQKDHM
LMERVRVMLGASAADQAAAKEAVVNAANTRALRASLQALKWHSNSSIGWT
AYTTALATAAGAGEHTCPDPNLCHPGNRCKPAEPGGVSFAERAKSLGIRY
ETFGDARFRMHNTNHDIAPRDAVSDGCYVYNERKTRSDVTNPEVMALAKA
FWHSDDVSRATGNSGKLLRRARVSARLRRGGGQGA back to topmRNA from alignment at Scaffold_372:419247..421089+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1363_7a-0001 ID=EsuBft1363_7a-0001|Name=EsuBft1363_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1843bp|location=Sequence derived from alignment at Scaffold_372:419247..421089+ (Ectocarpus subulatus male Bft15b)
CATCCTGTTTCACCATGAACATGAGGACGACTCATGCCTCGTTCTCCACG
GCAATCGACTCCGCTTGATCGAACTACATGCAGAGGACACCACTCTCGAG
GTCTTCAGCCCTAAACTCCAACATCTACAGCCGTGCCGACTCGGGCCTGG
CCGTGGCTCGTTGCAGTCTCATGCTTGTAGACCGCATAATCCACGTCCGC
GGGGAAAAGAGGATAGTAAAGGCAGCACCGGAAGAAGCACAACCGCGGGA
TACTGTTAACCTCCTTGTTGTTAAAGAAGGCTACCACCAAGGCAGCTGGC
AGTATGTCGTCCTCTGTAGTTGCTGATGAAGATCAGCTCCACGAAAAGGG
TAGAGAGCATGCTGAAGCCATCCAGGAACGAGCATCAAAGCGTGGCAACC
AACAGGCTGCCGCTGCTGCTGCTGCTGCTGCTGCTGCGGGGAAGGGGAGG
CGCAAGGGGGCGGACGCAGCTCTCTCCAACCCTCTAGCATTGGCTCACGA
TGGCGGGACGAGAAGCGGGGCTACCCCAGAGGCTTCGCGCGAGGAGCAGG
TGAGGTTTTGGGTTGTTGAAGTGCTGTTGAAATGCTTGGACTACAATTGT
ACTTCTTGGCGCCAATTCGTGCCGCTCTATATTTATGTACAGTACAGTCG
TCCCGCTTTAAAGACACATCACGTTTCTTTCGGGTGTCTTTTACGCAGGG
AAGTGCCTTTAAGATTCCGGGGCCACTAACTCACTGTCCCCGGGGCCAAT
GGTAGCGTAGAACGCGCATGAAAAGTTGCATGGGATTACTGTTGTACTTG
TTGCAGTCACTCTTCTACGTATGGCATTTGTTGTTGGCCCACCCATACTC
CTGCTGAATATCACACACACCCTCCCCCGACTCCAACAATTCCTGATAGA
TGTACGCAGGCTTCGGAGGAGCGTCGCTCTAGCGCGCTGGAGTTGACCCA
GAAAGACCACATGTTGATGGAGCGAGTACGGGTCATGCTGGGGGCGAGCG
CTGCAGACCAGGCAGCAGCTAAGGAGGCGGTGGTCAACGCGGCGAACACT
CGCGCGCTCCGTGCCTCGCTCCAAGCGCTGAAGTGGCACAGCAACAGCTC
GATAGGGTGGACCGCGTACACGACAGCGCTCGCCACAGCAGCGGGAGCGG
GGGAGCACACGTGTCCTGACCCCAACCTGTGCCACCCTGGCAACCGGTGC
AAGCCCGCTGAGCCTGGTGGAGTGAGCTTTGCCGAGCGAGCCAAGAGTCT
CGGCATTCGGTACGAGACTTTCGGCGACGCACGTTTCCGGATGCACAACA
CGAACCACGACATCGCCCCCAGGGACGCTGTGAGTGACGGGTGCTACGTG
TATAACGAGCGCAAGACACGGAGTGACGTGACGAATCCCGAGGTAATGGC
TCTCGCCAAGGCTTTTTGGCACTCCGACGACGTTTCCCGTGCAACAGGAA
ATTCAGGCAAGTTGCTGCGTCGCGCACGAGTTTCTGCTAGGCTACGCCGC
GGAGGCGGACAAGGCGCGTGAAGGCCACTTCACAACCTGGTCCCCTTACC
GGATCAAGAGCTTCGAAGTCAGGAAGTTTGGCCCCAAGGAATTCCTCGCC
CACCGATAGATCTGACGGGGATCCCTGGAAGTTCCAAGCTATACTTTTTC
ACGGGAACAGAGGAGGAGCAGGAGGATGTGCAGGATACCTGTAGTCTTGT
GTGGGCTACAAGTGTGGGGGTGCAGACAGACGATTCTGGGGTGGAAGCGG
CCGGAGGTAAGGTGTTGACGGCTAGGAAGTGGGTGGTAGACGAGTCCAGG
GCGAGGAAATGGACCGCCCCCAAGAACTTCACCAGATCTTGGA back to topCoding sequence (CDS) from alignment at Scaffold_372:419247..421089+ >EsuBft1363_7a-0001 ID=EsuBft1363_7a-0001|Name=EsuBft1363_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=858bp|location=Sequence derived from alignment at Scaffold_372:419247..421089+ (Ectocarpus subulatus male Bft15b)
ATGTCGTCCTCTGTAGTTGCTGATGAAGATCAGCTCCACGAAAAGGGTAG
AGAGCATGCTGAAGCCATCCAGGAACGAGCATCAAAGCGTGGCAACCAAC
AGGCTGCCGCTGCTGCTGCTGCTGCTGCTGCTGCGGGGAAGGGGAGGCGC
AAGGGGGCGGACGCAGCTCTCTCCAACCCTCTAGCATTGGCTCACGATGG
CGGGACGAGAAGCGGGGCTACCCCAGAGGCTTCGCGCGAGGAGCAGGCTT
CGGAGGAGCGTCGCTCTAGCGCGCTGGAGTTGACCCAGAAAGACCACATG
TTGATGGAGCGAGTACGGGTCATGCTGGGGGCGAGCGCTGCAGACCAGGC
AGCAGCTAAGGAGGCGGTGGTCAACGCGGCGAACACTCGCGCGCTCCGTG
CCTCGCTCCAAGCGCTGAAGTGGCACAGCAACAGCTCGATAGGGTGGACC
GCGTACACGACAGCGCTCGCCACAGCAGCGGGAGCGGGGGAGCACACGTG
TCCTGACCCCAACCTGTGCCACCCTGGCAACCGGTGCAAGCCCGCTGAGC
CTGGTGGAGTGAGCTTTGCCGAGCGAGCCAAGAGTCTCGGCATTCGGTAC
GAGACTTTCGGCGACGCACGTTTCCGGATGCACAACACGAACCACGACAT
CGCCCCCAGGGACGCTGTGAGTGACGGGTGCTACGTGTATAACGAGCGCA
AGACACGGAGTGACGTGACGAATCCCGAGGTAATGGCTCTCGCCAAGGCT
TTTTGGCACTCCGACGACGTTTCCCGTGCAACAGGAAATTCAGGCAAGTT
GCTGCGTCGCGCACGAGTTTCTGCTAGGCTACGCCGCGGAGGCGGACAAG
GCGCGTGA back to top
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