Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 7668.SPU_007890-tr |
| ProteomeId | EsuBft1363_9 |
| Protein domains | IPR009057 |
| Protein domains | SignalP-noTM |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | PTHR19303 |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | IPR007889 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 33208|Metazoa |
| Length | 49 |
| Evalue | 2.48e-15 |
| EggNOG OGs | 2CXPE@1|root,2RYUX@2759|Eukaryota,39MS3@33154|Opisthokonta,3CPBT@33208|Metazoa,3E5GP@33213|Bilateria |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | DDE superfamily endonuclease |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003677 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1363_9a-0001 ID=EsuBft1363_9a-0001|Name=EsuBft1363_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=498bp|location=Sequence derived from alignment at Scaffold_372:395431..395928+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTGGGGCATCTTTGCCCTTTTCGGGGTCCTGCTGCTAAGCATGGGACG
TAAGAGAGTAGACCCAGAGCAGGCCCAGAAGGCTGTAGATGCGGTACGCA
GCGGTGAGATGTCGCTCCGCGTTGCTGCGAGGACCTACGGGTTACCGCTA
GCCTCGCTGCACGACCGTGTGAAGAACAAGGTGGCCATAGATGCGAGGGT
TGGTCCCGGGACTGTCCTGAGCAAGGAGGAGGAAGATTTCGTAGAAGACG
TCTTGATCTACGCCTCCCGACACTTCTTGCTGTTGGGTCGGAGGGAGCTG
AGAGACGCTGTGCGCAACATCTGCACCGACGGGCGCAAGGTGCCCTGGGA
CCCAGACAAGGGCCCTGGGGACAGCTGGCTTGAGGGGTTTATGGCGAGAC
ACCCGGGTTTGTCGGAGCGAGCCACCCACATCTACGAAGCAAACCGGATT
AACGAAGACGGCGAGCCTCGCCTTCAAGCTTTCTACAAAGCATGGNNN back to topprotein sequence of EsuBft1363_9a-0001 >EsuBft1363_9 ID=EsuBft1363_9|Name=EsuBft1363_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=166bp
MWGIFALFGVLLLSMGRKRVDPEQAQKAVDAVRSGEMSLRVAARTYGLPL
ASLHDRVKNKVAIDARVGPGTVLSKEEEDFVEDVLIYASRHFLLLGRREL
RDAVRNICTDGRKVPWDPDKGPGDSWLEGFMARHPGLSERATHIYEANRI
NEDGEPRLQAFYKAWX back to topmRNA from alignment at Scaffold_372:395431..395928+ Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1363_9a-0001 ID=EsuBft1363_9a-0001|Name=EsuBft1363_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=498bp|location=Sequence derived from alignment at Scaffold_372:395431..395928+ (Ectocarpus subulatus male Bft15b)
ATGTGGGGCATCTTTGCCCTTTTCGGGGTCCTGCTGCTAAGCATGGGACG
TAAGAGAGTAGACCCAGAGCAGGCCCAGAAGGCTGTAGATGCGGTACGCA
GCGGTGAGATGTCGCTCCGCGTTGCTGCGAGGACCTACGGGTTACCGCTA
GCCTCGCTGCACGACCGTGTGAAGAACAAGGTGGCCATAGATGCGAGGGT
TGGTCCCGGGACTGTCCTGAGCAAGGAGGAGGAAGATTTCGTAGAAGACG
TCTTGATCTACGCCTCCCGACACTTCTTGCTGTTGGGTCGGAGGGAGCTG
AGAGACGCTGTGCGCAACATCTGCACCGACGGGCGCAAGGTGCCCTGGGA
CCCAGACAAGGGCCCTGGGGACAGCTGGCTTGAGGGGTTTATGGCGAGAC
ACCCGGGTTTGTCGGAGCGAGCCACCCACATCTACGAAGCAAACCGGATT
AACGAAGACGGCGAGCCTCGCCTTCAAGCTTTCTACAAAGCATGGNNN back to topCoding sequence (CDS) from alignment at Scaffold_372:395431..395928+ >EsuBft1363_9a-0001 ID=EsuBft1363_9a-0001|Name=EsuBft1363_9a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=498bp|location=Sequence derived from alignment at Scaffold_372:395431..395928+ (Ectocarpus subulatus male Bft15b)
ATGTGGGGCATCTTTGCCCTTTTCGGGGTCCTGCTGCTAAGCATGGGACG
TAAGAGAGTAGACCCAGAGCAGGCCCAGAAGGCTGTAGATGCGGTACGCA
GCGGTGAGATGTCGCTCCGCGTTGCTGCGAGGACCTACGGGTTACCGCTA
GCCTCGCTGCACGACCGTGTGAAGAACAAGGTGGCCATAGATGCGAGGGT
TGGTCCCGGGACTGTCCTGAGCAAGGAGGAGGAAGATTTCGTAGAAGACG
TCTTGATCTACGCCTCCCGACACTTCTTGCTGTTGGGTCGGAGGGAGCTG
AGAGACGCTGTGCGCAACATCTGCACCGACGGGCGCAAGGTGCCCTGGGA
CCCAGACAAGGGCCCTGGGGACAGCTGGCTTGAGGGGTTTATGGCGAGAC
ACCCGGGTTTGTCGGAGCGAGCCACCCACATCTACGAAGCAAACCGGATT
AACGAAGACGGCGAGCCTCGCCTTCAAGCTTTCTACAAAGCATGGNNN back to top
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