Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | EsuBft1363_13 |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 1 |
Length | 88 |
Hectar predicted targeting category | no signal peptide or anchor |
Date last modified | 2016-06-14 |
Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1363_13a-0001 ID=EsuBft1363_13a-0001|Name=EsuBft1363_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=881bp|location=Sequence derived from alignment at Scaffold_372:364271..365151- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTCGCAATTCCTCCCTTGTACTGGCGGCAGAAGCTGCCGCTGATGAT GCGACGCAAAACCCCTCCAACTGCAATCGGCCGTTTTTTCTCTCCCAGCG CTGAAAGGTTGGCACTGGTGTGGAGGTTCCAAAAGAAATCCGGAAGCTCG TCTCCGTAGTATAATAGAACACTATGAAGCTGAAGTCCGCTAAGGTTTCA GTAAAAGAATCACTCATCCCACCAGCTTGGAGATACGAAAAACGAAGACC ATCAGGCCCCGGAGCACTCTGAGGGTTGGCTTTCTTTACCGTCTGCTTGA TGAACTTGATTTCGAATGGTTCATCAGCTTCGGCGACGGAGTCGATCTTG TGCGTTTTTATACGATCTCTCGCAGCTTTGATGCTGGAATCCCACGCAGT AGCAATATCGTCAGGATCTTCGTTAGGGTGTAGGTTGCGAAGATGCTCCA GCGTGTCGTTGTTGCGCGGTGAAGGTGCTGGGGAGATTAAGGCACTGGCA GCTTTAGTGATGCCTCCGCTTTCGTGCGCAAGTCTTGTGGCTCTTCTTTG GCGATTGTCTTCAGTATCCGCATAATACTGAAGTCGACGATTCTTCTCGT ACATCATGAGCCAGGCGATAGGTTCACTCAGATCACCATTTGCAAAGCGG TTAAATCGGGATACCCTGTTCATCCTTCCATCAGTCGATCCATGCAATGC TGGGGTAAGATGAAGCAACTTTGTTGCTCGGACAAGTTGGAGTTGTCTTT CAACACGTGCTACTTCATATCTTTCCGCTGCAAGAGGAGACAGATCTGAG ATATCTGACTTCTGCTGATCCATGTGTACAGCTCCAAATGCTTGCACGAA GAGGATGACGACATGTTGGAAGTGTTTGCAA back to topprotein sequence of EsuBft1363_13a-0001 >EsuBft1363_13 ID=EsuBft1363_13|Name=EsuBft1363_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=52bp
MFAIPPLYWRQKLPLMMRRKTPPTAIGRFFSPSAERLALVWRFQKKSGSS SP back to topmRNA from alignment at Scaffold_372:364271..365151- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1363_13a-0001 ID=EsuBft1363_13a-0001|Name=EsuBft1363_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=881bp|location=Sequence derived from alignment at Scaffold_372:364271..365151- (Ectocarpus subulatus male Bft15b) ATGTTCGCAATTCCTCCCTTGTACTGGCGGCAGAAGCTGCCGCTGATGAT
GCGACGCAAAACCCCTCCAACTGCAATCGGCCGTTTTTTCTCTCCCAGCG
CTGAAAGGTTGGCACTGGTGTGGAGGTTCCAAAAGAAATCCGGAAGCTCG
TCTCCGTAGTATAATAGAACACTATGAAGCTGAAGTCCGCTAAGGTTTCA
GTAAAAGAATCACTCATCCCACCAGCTTGGAGATACGAAAAACGAAGACC
ATCAGGCCCCGGAGCACTCTGAGGGTTGGCTTTCTTTACCGTCTGCTTGA
TGAACTTGATTTCGAATGGTTCATCAGCTTCGGCGACGGAGTCGATCTTG
TGCGTTTTTATACGATCTCTCGCAGCTTTGATGCTGGAATCCCACGCAGT
AGCAATATCGTCAGGATCTTCGTTAGGGTGTAGGTTGCGAAGATGCTCCA
GCGTGTCGTTGTTGCGCGGTGAAGGTGCTGGGGAGATTAAGGCACTGGCA
GCTTTAGTGATGCCTCCGCTTTCGTGCGCAAGTCTTGTGGCTCTTCTTTG
GCGATTGTCTTCAGTATCCGCATAATACTGAAGTCGACGATTCTTCTCGT
ACATCATGAGCCAGGCGATAGGTTCACTCAGATCACCATTTGCAAAGCGG
TTAAATCGGGATACCCTGTTCATCCTTCCATCAGTCGATCCATGCAATGC
TGGGGTAAGATGAAGCAACTTTGTTGCTCGGACAAGTTGGAGTTGTCTTT
CAACACGTGCTACTTCATATCTTTCCGCTGCAAGAGGAGACAGATCTGAG
ATATCTGACTTCTGCTGATCCATGTGTACAGCTCCAAATGCTTGCACGAA
GAGGATGACGACATGTTGGAAGTGTTTGCAA back to topCoding sequence (CDS) from alignment at Scaffold_372:364271..365151- >EsuBft1363_13a-0001 ID=EsuBft1363_13a-0001|Name=EsuBft1363_13a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=159bp|location=Sequence derived from alignment at Scaffold_372:364271..365151- (Ectocarpus subulatus male Bft15b) ATGTTCGCAATTCCTCCCTTGTACTGGCGGCAGAAGCTGCCGCTGATGAT GCGACGCAAAACCCCTCCAACTGCAATCGGCCGTTTTTTCTCTCCCAGCG CTGAAAGGTTGGCACTGGTGTGGAGGTTCCAAAAGAAATCCGGAAGCTCG TCTCCGTAG back to top
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