Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 3641.EOY19734 |
| ProteomeId | EsuBft4308_2 |
| Protein domains | IPR012337 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Max annot lvl | 35493|Streptophyta |
| Length | 68 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.36e-07 |
| EggNOG OGs | COG2801@1|root,KOG0017@2759|Eukaryota,37THH@33090|Viridiplantae,3GG2K@35493|Streptophyta |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
| Description | Mitochondrial protein |
| COG category | O |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003676 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft4308_2a-0001 ID=EsuBft4308_2a-0001|Name=EsuBft4308_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=680bp|location=Sequence derived from alignment at Scaffold_372:32022..32701- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTCCAAGGGACAGGTGAAACCCGTCCAGAAGAGCACGAGCACACGCGC
AGTTAAGAAGTTATTTCGCATGTACCTCGACTTGGGGGGAAAGATGAAAA
CCAGGAGCTTTGGTGGCAACTGGTACACACTGATCATCAGAGACGATTTC
TCTCATTGGACGCGTGTTTTCTTCTTGAAGCACAAGTCTGACCCAGCGGT
TGGGTTTGCGAAGTTCCTGGCGGACTACCGAACGAAAGGGGTTCCGTGTG
AGGTTGTATCGCACGTACCGACGGTGGCGGCGAGTTCCAGGGGCAGTTTG
CGGAAGTTTGCCGCAGACACGGCATCAAACAAGAGTTCACCCCCCCTCAC
ACGCCAAAACACAACGGTGTAGCGGAGAGAGCGTTAGGGTTGATCACTGA
TGCCGCGCTTGCGTCACGCATCCAAGCGACGCAACTGTTCCCCGACGCAC
CGAACCACCCCGGGTTGTGGGCCGAGGCCATTTCGTGTGCATGCCATCAG
CTGAACTGCGCCGCCACTAAATCAAACGAGGGAGACAAGTCCGCCTACGA
GATGTTCCACGACTCCCCACCGCTTGTCCGGTCTACATACCCGTTTCTCA
AACCAGCCATGTTCAAGTCGAGAAGAAAAGCAAAGTCGCAACCCAAGGGC
GAAAAATGATGGTACCTTGGTCTTGCCCAC back to topprotein sequence of EsuBft4308_2a-0001 >EsuBft4308_2 ID=EsuBft4308_2|Name=EsuBft4308_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=123bp
MSKGQVKPVQKSTSTRAVKKLFRMYLDLGGKMKTRSFGGNWYTLIIRDDF
SHWTRVFFLKHKSDPAVGFAKFLADYRTKGVPCEVVSHVPTVAASSRGSL
RKFAADTASNKSSPPLTRQNTTV back to topmRNA from alignment at Scaffold_372:32022..32701- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft4308_2a-0001 ID=EsuBft4308_2a-0001|Name=EsuBft4308_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=680bp|location=Sequence derived from alignment at Scaffold_372:32022..32701- (Ectocarpus subulatus male Bft15b)
ATGTCCAAGGGACAGGTGAAACCCGTCCAGAAGAGCACGAGCACACGCGC
AGTTAAGAAGTTATTTCGCATGTACCTCGACTTGGGGGGAAAGATGAAAA
CCAGGAGCTTTGGTGGCAACTGGTACACACTGATCATCAGAGACGATTTC
TCTCATTGGACGCGTGTTTTCTTCTTGAAGCACAAGTCTGACCCAGCGGT
TGGGTTTGCGAAGTTCCTGGCGGACTACCGAACGAAAGGGGTTCCGTGTG
AGGTTGTATCGCACGTACCGACGGTGGCGGCGAGTTCCAGGGGCAGTTTG
CGGAAGTTTGCCGCAGACACGGCATCAAACAAGAGTTCACCCCCCCTCAC
ACGCCAAAACACAACGGTGTAGCGGAGAGAGCGTTAGGGTTGATCACTGA
TGCCGCGCTTGCGTCACGCATCCAAGCGACGCAACTGTTCCCCGACGCAC
CGAACCACCCCGGGTTGTGGGCCGAGGCCATTTCGTGTGCATGCCATCAG
CTGAACTGCGCCGCCACTAAATCAAACGAGGGAGACAAGTCCGCCTACGA
GATGTTCCACGACTCCCCACCGCTTGTCCGGTCTACATACCCGTTTCTCA
AACCAGCCATGTTCAAGTCGAGAAGAAAAGCAAAGTCGCAACCCAAGGGC
GAAAAATGATGGTACCTTGGTCTTGCCCAC back to topCoding sequence (CDS) from alignment at Scaffold_372:32022..32701- >EsuBft4308_2a-0001 ID=EsuBft4308_2a-0001|Name=EsuBft4308_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=372bp|location=Sequence derived from alignment at Scaffold_372:32022..32701- (Ectocarpus subulatus male Bft15b)
ATGTCCAAGGGACAGGTGAAACCCGTCCAGAAGAGCACGAGCACACGCGC
AGTTAAGAAGTTATTTCGCATGTACCTCGACTTGGGGGGAAAGATGAAAA
CCAGGAGCTTTGGTGGCAACTGGTACACACTGATCATCAGAGACGATTTC
TCTCATTGGACGCGTGTTTTCTTCTTGAAGCACAAGTCTGACCCAGCGGT
TGGGTTTGCGAAGTTCCTGGCGGACTACCGAACGAAAGGGGTTCCGTGTG
AGGTTGTATCGCACGTACCGACGGTGGCGGCGAGTTCCAGGGGCAGTTTG
CGGAAGTTTGCCGCAGACACGGCATCAAACAAGAGTTCACCCCCCCTCAC
ACGCCAAAACACAACGGTGTAG back to top
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