Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G716 |
| ProteomeId | EsuBft2058_2 |
| Protein domains | IPR005331 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Max annot lvl | 2759|Eukaryota |
| Length | 71 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.44e-14 |
| EggNOG OGs | 2CYGC@1|root,2S47N@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| Description | Sulfotransferase family |
| COG category | S |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0008146 |
| GO | 0016021 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2058_2a-0001 ID=EsuBft2058_2a-0001|Name=EsuBft2058_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=710bp|location=Sequence derived from alignment at Scaffold_372:17492..19742+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTATGCGCATATCCCTTGGAGGTTGAGAGAAGGGAATGCCAGTACTT
CACGATGTTGAGACACCCCATCGATCGCCTGGTGTCGGCGTTTTTCTACT
GCCCAACGGACCACGATGTCCAATTGAGGCCTCGGAAGTGGTGTGGGCAC
GAGGAGCACCCGGTGCCGGCGACCGAGCGCCTGCTGGACTTCGCGCAGGA
AAGCTGGCGGAATCAGGCGTTCAAGCAGATGACGTTCGGCTTGTACTGCC
CCCCTGACACCTTCTGCGAAGTGGCGGAGGTGAACAACGTGTCGCAGTGT
GAGACTTTTGTCGTGGGCGTTGGTTCGTTGGACGGGCTACGCGAGGTTGG
TCCACCGCAGATGCTGGACGAACCCGGTATTCTAGATGTCCTCCAGCAGG
TCCAGGACATCTTGGCGGGATATACGGCAGTGGGTATTATGGAACACTGG
GACCTGTCTATGCAGCTCTTCAACGCGCGCGTGCGGTCACCCGTGCGTGA
GTGGAACGTGTTCAAGCAGAGAAATCCGGGGGTAATGACCGGGCTTCGCG
ATGAGGTGCTTCAATGGGCTCACAAAAGCCCGGCCATTCACCGCGTAATA
GGAACAGATATGTTGTTGTACTCCTTTGGGCTGTCCATTTTCAAGCAGCA
GACGACTGCATCACTTGGTACGAATTGGCTCGAGATGTGATCTTCCTATG
TCACGACCGC back to topprotein sequence of EsuBft2058_2a-0001 >EsuBft2058_2 ID=EsuBft2058_2|Name=EsuBft2058_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=229bp
MLCAYPLEVERRECQYFTMLRHPIDRLVSAFFYCPTDHDVQLRPRKWCGH
EEHPVPATERLLDFAQESWRNQAFKQMTFGLYCPPDTFCEVAEVNNVSQC
ETFVVGVGSLDGLREVGPPQMLDEPGILDVLQQVQDILAGYTAVGIMEHW
DLSMQLFNARVRSPVREWNVFKQRNPGVMTGLRDEVLQWAHKSPAIHRVI
GTDMLLYSFGLSIFKQQTTASLGTNWLEM back to topmRNA from alignment at Scaffold_372:17492..19742+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2058_2a-0001 ID=EsuBft2058_2a-0001|Name=EsuBft2058_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2251bp|location=Sequence derived from alignment at Scaffold_372:17492..19742+ (Ectocarpus subulatus male Bft15b)
ATGTTATGCGCGTATATGGAACGACCGTAACGTTTGATTTCCGTTTTCGT
CTCCCGTGATCCCAGATATCCCTTGGAGGTTGAGAGAAGGGAATGCCAGT
ACTTCACGATGTTGAGACACCCCATCGATCGCCTGGTGTCGGCGTTTTTC
TACTGCCCAACGGACCACGATGTCCAATTGAGGCCTCGGAAGGTATGTGT
TGTAACGTCCCGCCGATAGCATGGCGGCAGGCTCCGCCGAACTTGAGTAC
AGTCGAGGCTCCGATATTCGAGTGTACCTTGTAAGAGGGGGCTCCGATGT
AAGAGGGTCGAAATCTGTTGCCACGGACTCGACCCGCTATACTGTAGTGA
AGTTGGGTACCCTCTGAGAGGTGACTCCGATTTATGGGGGTCGAGGCCCT
CTGTCACGCCACCCTCATACATGGGGTCGCGGTTTCGGCGTTTTGTCATC
TGTAGCATATATCACGGCCGCCATTAAGCTTCGGTCGTCGTACCGTTCAC
CCTCTAGGGGTCAAACTAACGGTGAAGCACGCTACCGACGCACGCGACAC
GTTCGCAGTGGTGTGGGCACGAGGAGCACCCGGTGCCGGCGACCGAGCGC
CTGCTGGACTTCGCGCAGGAAAGCTGGCGGAATCAGGCGTTCAAGCAGAT
GACGTTCGGCTTGTACTGCCCCCCTGACACCTTCTGCGAAGTGGCGGAGG
TGAGGAGTGATCTGGTTACTACCTCGTGAACGTGTTCTGCTCGCCTCTGT
GACTTGAGCCTAGACAGGTGAACAACGTGTCGCAGTGTGAGACTTTTGTC
GTGGGCGTTGGTTCGTTGGACGGGCTACGCGAGGTATTACTAGGAAATGT
AAATCGTTTATTCAGATTGCATTTTTTTTCTTCTTGGTTCGTTTATATTC
GCTGGGGTCTTCGAATCAAGAAGAAGTCAGCTGTGCGAGCTGTTCGAGCT
ACAGAAACGTCACTAATCGCACCTGGCAGCTGATTCACACCAACACATGA
TTTGCTTTCATCTTGCATCACCCCTTGATGACACTGTGCTCTCATGAGCC
CACTCTTGAGGGATCACTTGCCGTATCAATATTCTAATGTTTGTTGCGTG
CGTTTATCTGTACGTGTGTGGCTCATCTGGGGTTGCCGCAGGTTGGTCCA
CCGCAGATGCTGGACGAACCCGGTATTCTAGATGTCCTCCAGCAGGTCCA
GGTAGGGCTTGCAAATCCGCTACTTGTTTCCCGGTATACACAATTAGCGC
CCGCGTCAAGAAACGTCAGTTTGGGATCGAGGCTCAATTTCTTATTTCTT
CGTCACCACCACCGAGCACAGGCCATGATACAGAGTTTGTTTCGTATAGG
ATTCACGGCTGAGGTGTGTTTGTTGGTATATTTTTGTCGATTATCGCCAG
TATCTGAGCCTCTGTTTCTAAAAGGTTGGCTTGCTTCTTGATCACTGGCC
CTTACTGTAGTGTTGCTCGTAACAAGGAGTAGGGAACACAGTGCACGGGG
GAGTCAGCCGTAAGATATCCTAGGCTGTTTTGGGCCGCCTTACACACACA
GCGATTTTGCTTCCAAATTTCCATTTTTTTCGGTGCCGGTCGTCCAAATT
TTCCAAATCTCCAAGTTTTCCCTGGGCCGCACAAAATCGAGGCTCAACGG
TCTACGGATTTGGATAATTGGAAATTTGGAAGCGAAAAATCTGCTGTATA
TAACGGCCCTTACAGGATGCTCAGGAGCCCGAAGTTGCGCATTCTCCCAG
CAAAGAGGGCATGTCTTACCGTAGGCAAGTGTGAATCACCCTTCCAGTGG
TGCATATGCTGTGTTCAAAGGCACCTAACCCTACTTTTTGCACAAGTGGC
TCCTACGGTACCCATGATATTATCGGCGTCTTGGCCGCTAAACCTATACC
ACTAGGAAGTGAGACGTGCTTGTGGCTGTATCTCGGACGCTCGCAGGACA
TCTTGGCGGGATATACGGCAGTGGGTATTATGGAACACTGGGACCTGTCT
ATGCAGCTCTTCAACGCGCGCGTGCGGTCACCCGTGCGTGAGTGGAACGT
GTTCAAGCAGAGAAATCCGGGGGTAATGACCGGGCTTCGCGATGAGGTGC
TTCAATGGGCTCACAAAAGCCCGGCCATTCACCGCGTAATAGGAACAGAT
ATGTTGTTGTACTCCTTTGGGCTGTCCATTTTCAAGCAGCAGACGACTGC
ATCACTTGGTACGAATTGGCTCGAGATGTGATCTTCCTATGTCACGACCG
C back to topCoding sequence (CDS) from alignment at Scaffold_372:17492..19742+ >EsuBft2058_2a-0001 ID=EsuBft2058_2a-0001|Name=EsuBft2058_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=690bp|location=Sequence derived from alignment at Scaffold_372:17492..19742+ (Ectocarpus subulatus male Bft15b)
ATGTTATGCGCATATCCCTTGGAGGTTGAGAGAAGGGAATGCCAGTACTT
CACGATGTTGAGACACCCCATCGATCGCCTGGTGTCGGCGTTTTTCTACT
GCCCAACGGACCACGATGTCCAATTGAGGCCTCGGAAGTGGTGTGGGCAC
GAGGAGCACCCGGTGCCGGCGACCGAGCGCCTGCTGGACTTCGCGCAGGA
AAGCTGGCGGAATCAGGCGTTCAAGCAGATGACGTTCGGCTTGTACTGCC
CCCCTGACACCTTCTGCGAAGTGGCGGAGGTGAACAACGTGTCGCAGTGT
GAGACTTTTGTCGTGGGCGTTGGTTCGTTGGACGGGCTACGCGAGGTTGG
TCCACCGCAGATGCTGGACGAACCCGGTATTCTAGATGTCCTCCAGCAGG
TCCAGGACATCTTGGCGGGATATACGGCAGTGGGTATTATGGAACACTGG
GACCTGTCTATGCAGCTCTTCAACGCGCGCGTGCGGTCACCCGTGCGTGA
GTGGAACGTGTTCAAGCAGAGAAATCCGGGGGTAATGACCGGGCTTCGCG
ATGAGGTGCTTCAATGGGCTCACAAAAGCCCGGCCATTCACCGCGTAATA
GGAACAGATATGTTGTTGTACTCCTTTGGGCTGTCCATTTTCAAGCAGCA
GACGACTGCATCACTTGGTACGAATTGGCTCGAGATGTGA back to top
|