Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D8LF87 |
| ProteomeId | EsuBft982_3 |
| Protein domains | IPR000008 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 8 |
| Max annot lvl | 2759|Eukaryota |
| Length | 124 |
| Hectar predicted targeting category | other localisation |
| Evalue | 2.22e-170 |
| EggNOG OGs | KOG1030@1|root,KOG1326@1|root,KOG1030@2759|Eukaryota,KOG1326@2759|Eukaryota |
| Ec32 ortholog description | C2 domain |
| Ec32 ortholog | Ec-01_004030.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
| KEGG ko | ko:K19949,ko:K22125,ko:K22127 |
| Description | plasma membrane repair |
| COG category | S |
| BRITE | ko00000,ko04131 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0031227 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft982_3a-0001 ID=EsuBft982_3a-0001|Name=EsuBft982_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1245bp|location=Sequence derived from alignment at Scaffold_360:409886..413648+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CGCATCAAAATGGAGTTGCAGCTCCCGCTCGATTTCATCTACGCCCCGCG
TGTAAAGATCAGGGTATACGACACTCGGCTTGGAGGGTTCAACGTGCCCC
TTGTGGGGACGGGTCGGATTGAGCTCGGGAAGAAGCTGCCGTGGAGCCCG
GAGTACGAGGCGCCCCTGGCCAAGACATTCGCAAAGGACGACCTGCTGCG
GGCCATCACGGCGAACGGAAACGATTCCACCTCCGGCGGCAACGACAACA
ACGACCCGTCGGCACGCGGCAGCGACGCCGGCGGCGGCCTCGGCGGCCTC
GGCGGCGGCTCCGCCTCCCACCGTCGCGGCGGCCTGCAATGGGGCAGCTC
CGGCGACTATGGGAGCGACGCCGAGATGTCCGACTTCGAGGGAGAGGCCT
CCGTCTTTGGGGCCGGCGGCGGCGCGAAGTCCGAGTTCGGCGGCGGAAGG
TCAGGGTTCGGCGCCTCCCTTACCGGGGGAAGCACCTCTACAAACCAGGC
CGGTAGCGGTGGGCGCACCAGCACGAGGGCCTTCGGCGGCCCGGCGAGCG
GCGGAGGCCACCGGCAGGCCCGTAGCAGCCGGTCGCGGTCACGCAGCGAC
TTCGGCGGGGGCGGCGGCGGCGCCCTGGGCGTGATGCGGCAGTCGAGCTG
GAACAAGAGCGGCACCATAGACAACTCGCCGCAGCTCAACGCCAGCGGGA
AGGTGATCGACACCGGCATCGGCGTCATGCCCGCTCTCGAGCTCGCGCGA
CAGGAGGCCGGCCTCGGCGTTGGGTCCATCCCGGGCAGCCAGCTCTTGAC
GCCGGTGGGCGGCGGGGCTGGCGGGGCGCTGGGGGACACTGGGGGCTTCG
GCGGCGGGGGGGGGGGCAGCGTGGGAGGAGAGGAGGAGCTGATGGCGACG
CCGTTCGAATCGTACGATCTCTTCCGGGGGAAGCTGCTTGGCGGCGGAAT
CGGCGGCAGCACCCTCAAGAAGGTGGGCAAGCTGAAGTGCATCGTGAGGG
TTACCGAGGGAGACCCCGACGACGAGCCGCTGTTCGTGAACAAGAAGAGC
TTCCCGACCCTTGCCAAGGCCAAGGCCAAGAACGACATCATCCTCGCGGA
GCTCCTCAAGCCGAAGGGGTACAAGGTGAGGCTGTACGTCCTGCAAGCCC
TGAACCTGACCGCGATGGACGTCGGCATCGGCGGCAGGCCTGGCAAGTCT
GACCCTTACCTCAAGGTCAAGCTGGGCAAGGAGGTGTCAACGTAA back to topprotein sequence of EsuBft982_3a-0001 >EsuBft982_3 ID=EsuBft982_3|Name=EsuBft982_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=411bp
MELQLPLDFIYAPRVKIRVYDTRLGGFNVPLVGTGRIELGKKLPWSPEYE
APLAKTFAKDDLLRAITANGNDSTSGGNDNNDPSARGSDAGGGLGGLGGG
SASHRRGGLQWGSSGDYGSDAEMSDFEGEASVFGAGGGAKSEFGGGRSGF
GASLTGGSTSTNQAGSGGRTSTRAFGGPASGGGHRQARSSRSRSRSDFGG
GGGGALGVMRQSSWNKSGTIDNSPQLNASGKVIDTGIGVMPALELARQEA
GLGVGSIPGSQLLTPVGGGAGGALGDTGGFGGGGGGSVGGEEELMATPFE
SYDLFRGKLLGGGIGGSTLKKVGKLKCIVRVTEGDPDDEPLFVNKKSFPT
LAKAKAKNDIILAELLKPKGYKVRLYVLQALNLTAMDVGIGGRPGKSDPY
LKVKLGKEVST back to topmRNA from alignment at Scaffold_360:409886..413648+ Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft982_3a-0001 ID=EsuBft982_3a-0001|Name=EsuBft982_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3763bp|location=Sequence derived from alignment at Scaffold_360:409886..413648+ (Ectocarpus subulatus male Bft15b)
CGCATCAAAATGGAGTTGCAGCTCCCGCTCGATTTCATCTACGCCCCGCG
TGTAAAGATCAGGTGAGAGTAAAATTGGTCCGAAACCAACGTCACTCGAT
GCCGCAAATCGCCATGCTGGTGTCGATACCGTCCCCCCCGCCCCCCCCGT
TCTTGATCCGAGACTTGAAGAAGCGGCGGCGCCAAGTGGGACTCTGTTAT
TTGCTGTGTCTTCCTGTTGGCATTCTCTGTCTTACCCTCCCTGCCTGGCA
TCCTGTGAATAGTAATATTTATCTTCTTGACAACGAAGCGAAACCGTTGC
TCGTTGAGGAAAGGGTGGATGCGAAATATACCAAAGATAGAATTGAGATG
CAATGGACGAAGCAGCAAGCTTGCGTCAACGCCCCCCCGCTCCTGCAGAC
AACTATGATATTGCGTGTCCCCCCACCCCCACTGTGTTCCACACTACTTC
CTAAGGGTATACGACACTCGGCTTGGAGGGTTCAACGTGCCCCTTGTGGG
GACGGGTCGGATTGAGCTCGGGAAGAAGCTGCCGTGGAGCCCGGAGTACG
AGGCGCCCCTGGCCAAGACATTCGCAAAGGACGACCTGCTGCGGGCCATC
ACGGCGAACGGGTTAGTCGGTGAATGCGTCCTATTCTTGTAGTCTGTGCC
TGTGGTGCTTCGAAGCGTGTTGTTTTAGTATGTAGGCAAGCGTGAAGGAT
TCACAGCGGTTTGATCGATTTGTGGCATCGTTGACACGAGTCATCGACCA
ACCAAAAGCGCAGTCCAGCTTCTACTGTGTGCCCGCTGCCCCCCCCCCCC
CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNGCCCGCTGCCCCCCCCCCCCCAAACACTCAAGAGTGTTTC
TAAACGCACACCTCGCTCTCCACCCCTGTTTCATCGCGCGCGCAGAAACG
ATTCCACCTCCGGCGGCAACGACAACAACGACCCGTCGGCACGCGGCAGC
GACGCCGGCGGCGGCCTCGGCGGCCTCGGCGGCGGCTCCGCCTCCCACCG
TCGCGGCGGCCTGCAATGGGGCAGCTCCGGCGACTATGGGAGCGACGCCG
AGATGTCCGACTTCGAGGGAGAGGCCTCCGTCTTTGGGGCCGGCGGCGGC
GCGAAGTCCGAGTTCGGCGGCGGAAGGTCAGGGTTCGGCGCCTCCCTTAC
CGGGGGAAGCACCTCTACAAACCAGGCCGGTAGCGGTGGGCGCACCAGCA
CGAGGGCCTTCGGCGGCCCGGCGAGCGGCGGAGGCCACCGGCAGGCCCGT
AGCAGCCGGTCGCGGTCACGCAGCGACTTCGGCGGGGGCGGCGGCGGCGC
CCTGGGCGTGATGCGGCAGTCGAGCTGGAACAAGAGCGGCACCATAGACA
ACTCGCCGCAGCTCAACGCCAGCGGGAAGGTGATCGACACCGGCATCGGC
GTCATGCCCGCTCTCGAGCTCGCGCGACAGGAGGCCGGCCTCGGCGTTGG
GTCCATCCCGGGCAGCCAGCTCTTGACGCCGGTGGGCGGCGGGGCTGGCG
GGGCGCTGGGGGACACTGGGGGCTTCGGCGGCGGGGGGGGGGGCAGCGTC
ATNGGGGGGGGGGGGGGGGGGCAGCGTCATGGGAGGGGGGAGCATCGCGG
GAGCGCTGGGGCTGGAGGAGACGACTGGGTGGGACGAGGAGGATGACGAG
CTTTCTCAGGTCCCCCAATACCTCAAGGGCCGCGAAGAGCTGGAGCAGTC
GCTAGGTGGGAGGAGGTTTGAGTTTTGGATTTTTGTGTGGAGAGAGCAAC
AAGAGGTTGCGCTGTCCGCTGCTGCGCCGCAATAGAGCGAGGTACCGCGG
CAATACTCTACACTGCTCTGCGTCGTCCCCACTGCGCCCGGGACAATGCT
CTTCCCACCCCAATGAGCGTTTTTTTTTTTTTTCGTCCTGTATGTCTTTT
TTCTTTTCTGCTCTAAATTAACTCAGAGGAGGAGCTGATGGCGACGCCGT
TCGAATCGTACGATCTCTTCCGGGGGAAGCTGCTTGGCGGCGGAATCGGC
GGCAGCACCCTCAAGAAGGTATTATCTAGAAGCGGCCACCAACACCACAA
ATCCGCTCAAGGGTGTTGGTTAGGTGTCGTCGTCAGCAGCAGAAGCAGCA
GCTGGTTGGTTGGCTGGAGCGTGATCGAGCGAAAGAGTCTATGTGCCCTT
TCGTTTGCCATGAGCTAAACATTGTCCGAGAGGGCATTCGTTGACTATTG
GAGAGTTTGGCGTCGAGCAAGCTATGGCTTTGACGGCGTCCAACTCATGC
GAAGCTCGACCAGGAGGCCCCAATAGAGCAGTTGTTGACCTATCTTCCCT
CGGTCGTGCGTCGTTCGTGTTTTCCCGAGTCATCCGAGGGAGTGGTTACG
TTGCCGAGCCAATCCGTGGTATATTCAACGTGATTGCTATCTTGTAGAGT
CGGCTGGCTCTCAGGCTGTGTACCGAGTGTGGGTCAGCTGCTACGGTTTT
GAGCGCCCTTTCTGTTCCGTTGCCGACCTTCACCACCCCTCCTACTTCCG
CGAACCCTGATTCGTTTGTCTCCTTTTCCAACGTGCCGTCGCGCACAATA
AACGGCCCACGAGTGCACGGCCAATCGTGGAAGGCTGGTGACGATTACGC
GCGCGAATCGATTGCGCTGCCCCTGACGTCATATCACCTATGTTTTTTTG
CCCGGTACGCACAATTTATATACGAACCTCGCACACGCGCCCTCCCCCTA
AACAAACACACGCACGCATGTAAATTTGTAGCTATTCATAGCTGCTGCTG
TCCCTCGCTCTCTGTATTCGTAAACGCATTCCCCTCCTCCAAAAAAGGTG
GGCAAGCTGAAGTGCATCGTGAGGGTTACCGAGGGAGACCCCGACGACGA
GCCGCTGTTCGTGAACAAGAAGAGCTTCCCGACCCTTGCCAAGGCCAAGG
CCAAGAACGACATCATCCTCGCGGAGCTCCTCAAGGTAACGGTAGCGGTA
ACGGTAGCGGTAACGGTATCGTTTATTTGTGGTTCTCTTGTTACGTTGTT
GTTGTTGGCGCTGGCTTGTTGTGTTGGATGTCTAGAAAACGCAGGCCGAG
GGATGGTGGATCGCTGAAGGAGAGGAGACCACGGCTTCTGTAGCACATGT
CGCGCACGTTAGAAGAAGGTGTCCCGCACACGCTAGTCATAACGCTGTCG
CTGCCTCTACTTTCCTCGCACCACACCGCATCCCTACGCACACACGCACG
AGAGACTCCCACGTGTCGTTCACCAGCCGTCATCCCGTTGTGGTTGTTCG
TTGTTATCGGTTTTTGCCGTTGAACAGCCGAAGGGGTACAAGGTGAGGCT
GTACGTCCTGCAAGCCCTGAACCTGACCGCGATGGACGTCGGCATCGGCG
GCAGGCCTGGCAAGTCTGACCCTTACCTCAAGGTCAAGCTGGGCAAGGAG
GTGAGAGGGAAACGCCGGTTGCGGATAAAGTGCAAACATTTGTATTAAAA
TACTCAAGAAGTAGAGGCGAAAGAAAAGAGAAAGAACAGATGCATGGCTC
CTTTTCGCACTCAAGCCTGATGCTTGCTGTGATGCAAGCCTTGAACCACC
GACGGCCTCTTGTTTAGTCACTCCAGTCGTTCGGTGTTTTGCGCAAGGGA
CGTGTGCCCCCCCCCCCCCCGCACGCGCCCTGAGACGGTACTTATTGCTG
CTTTTTTCTCCGCGGCCTTTACTTTATTGGTTTTCTACACCTTGATCACA
GGTGTCAACGTAA back to topCoding sequence (CDS) from alignment at Scaffold_360:409886..413648+ >EsuBft982_3a-0001 ID=EsuBft982_3a-0001|Name=EsuBft982_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1236bp|location=Sequence derived from alignment at Scaffold_360:409886..413648+ (Ectocarpus subulatus male Bft15b)
ATGGAGTTGCAGCTCCCGCTCGATTTCATCTACGCCCCGCGTGTAAAGAT
CAGGGTATACGACACTCGGCTTGGAGGGTTCAACGTGCCCCTTGTGGGGA
CGGGTCGGATTGAGCTCGGGAAGAAGCTGCCGTGGAGCCCGGAGTACGAG
GCGCCCCTGGCCAAGACATTCGCAAAGGACGACCTGCTGCGGGCCATCAC
GGCGAACGGAAACGATTCCACCTCCGGCGGCAACGACAACAACGACCCGT
CGGCACGCGGCAGCGACGCCGGCGGCGGCCTCGGCGGCCTCGGCGGCGGC
TCCGCCTCCCACCGTCGCGGCGGCCTGCAATGGGGCAGCTCCGGCGACTA
TGGGAGCGACGCCGAGATGTCCGACTTCGAGGGAGAGGCCTCCGTCTTTG
GGGCCGGCGGCGGCGCGAAGTCCGAGTTCGGCGGCGGAAGGTCAGGGTTC
GGCGCCTCCCTTACCGGGGGAAGCACCTCTACAAACCAGGCCGGTAGCGG
TGGGCGCACCAGCACGAGGGCCTTCGGCGGCCCGGCGAGCGGCGGAGGCC
ACCGGCAGGCCCGTAGCAGCCGGTCGCGGTCACGCAGCGACTTCGGCGGG
GGCGGCGGCGGCGCCCTGGGCGTGATGCGGCAGTCGAGCTGGAACAAGAG
CGGCACCATAGACAACTCGCCGCAGCTCAACGCCAGCGGGAAGGTGATCG
ACACCGGCATCGGCGTCATGCCCGCTCTCGAGCTCGCGCGACAGGAGGCC
GGCCTCGGCGTTGGGTCCATCCCGGGCAGCCAGCTCTTGACGCCGGTGGG
CGGCGGGGCTGGCGGGGCGCTGGGGGACACTGGGGGCTTCGGCGGCGGGG
GGGGGGGCAGCGTGGGAGGAGAGGAGGAGCTGATGGCGACGCCGTTCGAA
TCGTACGATCTCTTCCGGGGGAAGCTGCTTGGCGGCGGAATCGGCGGCAG
CACCCTCAAGAAGGTGGGCAAGCTGAAGTGCATCGTGAGGGTTACCGAGG
GAGACCCCGACGACGAGCCGCTGTTCGTGAACAAGAAGAGCTTCCCGACC
CTTGCCAAGGCCAAGGCCAAGAACGACATCATCCTCGCGGAGCTCCTCAA
GCCGAAGGGGTACAAGGTGAGGCTGTACGTCCTGCAAGCCCTGAACCTGA
CCGCGATGGACGTCGGCATCGGCGGCAGGCCTGGCAAGTCTGACCCTTAC
CTCAAGGTCAAGCTGGGCAAGGAGGTGTCAACGTAA back to top
|