Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft982_10 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 68 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft982_10a-0001 ID=EsuBft982_10a-0001|Name=EsuBft982_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=683bp|location=Sequence derived from alignment at Scaffold_360:354266..355157- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GCTTCGTTGTTGGTGCTCGGCGCCGGCGTGACGAACTCCTGGCTGTCCGC
CGCCGGTCAGACATCCAGGCCCGGTTCTGCAAGAGTGGGGGGTGCGCACG
CCATGTCAGGCAGCCACGCTTCAGGGGGGGCGAGTGGACCTTCGGGAAAC
CGTGGAAGGAAGCCCCGTGCCAAGACCATTAAGCTCGCCGAGGATGGGCT
AGATAGCTTCATGGAGCGACAGGTGGCTGACGCTCGGGCACTCGCCGATC
AGAAATGTGAAGAGGACGACGGGAGGCGGGCGGCGGAAGCTAAACGAGAA
GTAGGGAGGAGGCAAGAGCTCCTGGACATGATGGCCCACGAGAGGGCAAT
GCGGGAAGATGAAAGGAAACACGACAGACAAGAGCGTGAAAGGGAGAGGG
CGACTGCACGGGCAGAGCAAAAGGAAGATCGTGATCACCAAATCAGGATG
ATGCAACTCCAGGTAGACCTGGCGAAGGCGAAGGGCAACAATAACTAGCT
AACTGGTTGGGGTTGCTGTTGCTGCAGTTGCTAGGGCATGCGTTGCATGT
GTTGTTTGTTTTTTTCAACAGCAGGCTCTTCAAAATATTATCGTGGCCTC
CGTTGCGCCTTGCGCGTTTTTTTCGGGGGAGCTTGCCTGTTCGGGGTGGG
GAAAAATGGGAATGGGTTTTCGCCCTTGCTGCT back to topprotein sequence of EsuBft982_10a-0001 >EsuBft982_10 ID=EsuBft982_10|Name=EsuBft982_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=131bp
MSGSHASGGASGPSGNRGRKPRAKTIKLAEDGLDSFMERQVADARALADQ
KCEEDDGRRAAEAKREVGRRQELLDMMAHERAMREDERKHDRQERERERA
TARAEQKEDRDHQIRMMQLQVDLAKAKGNNN back to topmRNA from alignment at Scaffold_360:354266..355157- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft982_10a-0001 ID=EsuBft982_10a-0001|Name=EsuBft982_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=892bp|location=Sequence derived from alignment at Scaffold_360:354266..355157- (Ectocarpus subulatus male Bft15b)
GCTTCGTTGTTGGTGCTCGGCGCCGGCGTGACGAACTCCTGGCTGTCCGC
CGCCGGTCAGACATCCAGGCCCGGTTCTGCAAGAGTGGGGGGTGCGCACG
CCATGTCAGGCAGCCACGCTTCAGGGGGGGCGAGTGGACCTTCGGGAAAC
CGTGGAAGGAAGCCCCGTGCCAAGACCATTAAGCTCGCCGAGGATGGGCT
AGATAGGTAAGGTTGTTCGTCGACTCTGCCCGTGTCTTGGTTCTCTATTT
CCTTCGTGTGGTATACGCTGTGCATTATTGTTAGATTCTTTTGGTGGACG
TAACCTGTACCAGAGAAGTGTCGTAGCAGTAATATTGTTGGCTACTCCAT
CAGGGAGGTGCCAGAGCTTATCCTACCCTGGTGTCTCTCTTGCGCCGTTG
TGCCACGTGTCCCAGCTTCATGGAGCGACAGGTGGCTGACGCTCGGGCAC
TCGCCGATCAGAAATGTGAAGAGGACGACGGGAGGCGGGCGGCGGAAGCT
AAACGAGAAGTAGGGAGGAGGCAAGAGCTCCTGGACATGATGGCCCACGA
GAGGGCAATGCGGGAAGATGAAAGGAAACACGACAGACAAGAGCGTGAAA
GGGAGAGGGCGACTGCACGGGCAGAGCAAAAGGAAGATCGTGATCACCAA
ATCAGGATGATGCAACTCCAGGTAGACCTGGCGAAGGCGAAGGGCAACAA
TAACTAGCTAACTGGTTGGGGTTGCTGTTGCTGCAGTTGCTAGGGCATGC
GTTGCATGTGTTGTTTGTTTTTTTCAACAGCAGGCTCTTCAAAATATTAT
CGTGGCCTCCGTTGCGCCTTGCGCGTTTTTTTCGGGGGAGCTTGCCTGTT
CGGGGTGGGGAAAAATGGGAATGGGTTTTCGCCCTTGCTGCT back to topCoding sequence (CDS) from alignment at Scaffold_360:354266..355157- >EsuBft982_10a-0001 ID=EsuBft982_10a-0001|Name=EsuBft982_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=396bp|location=Sequence derived from alignment at Scaffold_360:354266..355157- (Ectocarpus subulatus male Bft15b)
ATGTCAGGCAGCCACGCTTCAGGGGGGGCGAGTGGACCTTCGGGAAACCG
TGGAAGGAAGCCCCGTGCCAAGACCATTAAGCTCGCCGAGGATGGGCTAG
ATAGCTTCATGGAGCGACAGGTGGCTGACGCTCGGGCACTCGCCGATCAG
AAATGTGAAGAGGACGACGGGAGGCGGGCGGCGGAAGCTAAACGAGAAGT
AGGGAGGAGGCAAGAGCTCCTGGACATGATGGCCCACGAGAGGGCAATGC
GGGAAGATGAAAGGAAACACGACAGACAAGAGCGTGAAAGGGAGAGGGCG
ACTGCACGGGCAGAGCAAAAGGAAGATCGTGATCACCAAATCAGGATGAT
GCAACTCCAGGTAGACCTGGCGAAGGCGAAGGGCAACAATAACTAG back to top
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