Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Symbol | sulP |
| Seed ortholog | 2880.D7FPW1 |
| ProteomeId | EsuBft985_7 |
| Protein domains | CYTOPLASMIC_DOMAIN |
| Protein domains | SignalP-TM |
| Protein domains | IPR030402 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | TMhelix |
| Protein domains | IPR001902 |
| Protein domains | TRANSMEMBRANE |
| Owner | apollo_admin@sb-roscoff.fr |
| Note | probable sulfate transporter os:arabidopsis thaliana gn:sultr3 5 pe:2 sv:1 [Automatic annotation] |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 850 |
| Hectar predicted targeting category | signal peptide |
| Evalue | 1.22e-69 |
| EggNOG OGs | COG0659@1|root,KOG0236@2759|Eukaryota |
| Ec32 ortholog description | STAS domain |
| Ec32 ortholog | Ec-01_008480.1 |
| Date last modified | 2016-11-24 |
| Date creation | 2016-06-14 |
| Description | sulfate permease |
| Description | secondary active sulfate transmembrane transporter activity |
| COG category | U |
| Note | Kleinjan H., annotator |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0006810 |
| GO | 0097066 |
| GO | 0010996 |
| GO | 1902476 |
| GO | 0016021 |
| GO | 0090102 |
| GO | 0008271 |
| GO | 0008272 |
| tcdb | 2.A.53 |
| GO | 1902074 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft985_7a-0001 ID=EsuBft985_7a-0001|Name=EsuBft985_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=850bp|location=Sequence derived from alignment at Scaffold_358:419624..421164+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATTCGACACCGCTTCCAGTTCAGGCCCAGCCAGACCCCCAGCCCGAGCGA
GTACGTGGCCAAGATGAAGAGAAAGATGGCCAAGAGGCTCGGCAGCCCTC
TGGCCGTGCTCAACTTCTTGCTTCCGATCACGAAGCAGCTCAACAACTAC
ACGTCCGAGAAGTTGGCGAGAGACGCTGTCGTGGGGTGCACCATGGCGAC
CCTTATGATACCACAGGGGCTGGCTTTCGCGACCGTGTCTGGCATCCCCA
TCCTTTACGGGCTCTACATCGTGTGGGCCCCGCCCTTCTTCTACTCGCTC
TTCGGGGTCAGCCTCCACGTCAGCTACGGCCCGTTCGCCCTCGTGGGGCT
CTTCATCAGCGACGCGCTGCGCATCCGGGGCTACCAGCCGTGCGACGGCC
TGTGCCGCGACCAGCCGGAGGAGACTAAGAGAGGATGATCGTTTGTTGTG
CATGCTGTTGGTCTCGTTGTTATTGGTTTTTTGTTACAATGGTTGTTGTT
GAGACCACCTTTATAAAGGTTGAAACTCCCCAACGTCTGTCGAGGACGAT
GCCCTCTTTTCCACAATGGCGTCGACGAAGAGATGTCAGCGTGTCTGCTT
TTGGTTGCTAAAGACACGGGTTCAAGACCTGCTGCTCACCTAATTTTCTT
CCGGAGTACGGAAAAAAGAAAAACGGTGGGTGGGCCAAGAAACGATGCAC
TGTCTATCGAACTCGAAACTTCTGGCAATGCGTGGCGGAAGTGACGCACC
CGCACACACGCACAGAACATGGTTGGAAAAACGGTGGTTCTACTCGCCGC
CAGCCGGTCGGGTTCCGGTTACCCCAAGAAGACTGCTCTTGCCTAGCAAA back to topprotein sequence of EsuBft985_7a-0001 >EsuBft985_7 ID=EsuBft985_7|Name=EsuBft985_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=124bp
MKRKMAKRLGSPLAVLNFLLPITKQLNNYTSEKLARDAVVGCTMATLMIP
QGLAFATVSGIPILYGLYIVWAPPFFYSLFGVSLHVSYGPFALVGLFISD
ALRIRGYQPCDGLCRDQPEETKRG back to topmRNA from alignment at Scaffold_358:419624..421164+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft985_7a-0001 ID=EsuBft985_7a-0001|Name=EsuBft985_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1541bp|location=Sequence derived from alignment at Scaffold_358:419624..421164+ (Ectocarpus subulatus male Bft15b)
ATTCGACACCGCTTCCAGTTCAGGCCCAGCCAGACCCCCAGCCCGAGCGA
GTACGTGGCCAAGATGAAGAGAAAGATGGCCAAGAGGCTCGGCAGCCCTC
TGGCCGTGCTCAACTTCTTGCTTCCGATCACGAAGCAGCTCAACAACTAC
ACGTCCGAGAAGTTGGCGAGAGACGCTGTCGTGGGGTGCACCATGGCGAC
CCTTATGATACCACAGGTATGCACCTGCGGTAAGCGTGTTTTTTTCAATA
TGTTTATACACCGGCTGCGTACTTGTTGACATGAGGGAAAGAAGTTTGCG
CGTCGGCTTCGCTGTCGAGTTGAAGGCATGCATCGCGAAGGGTGTGGGTT
GTCCCTCTCTGTTGGTGTGGACATGGATACACCATGAGTGCTGTAGTTGC
TCCCTCATCAGCGAAGGCAATGGCAAAGAGTCGGGTAGTTTAGATGCAGC
AAGCGACAGTAGTGATGGATCATTGAAGAACATTGACATAATGCCTTTTT
GCCAAGCTTGGGCAGCCTCTCTCTCCGTCATCATGCCCACCGCCGTTTCA
CGAACATGTACCAGCTTTTTTTTCAATGTGTCGCACCCGCCTATTTGCGA
CGGCACTGCAGCGTTCACCCTCCCTCCTGTCGGGCCCTGTACCTCTAAAA
CTTTGTTTCTTTTGCTCATCTTGTAGTCCAAGTATTCAATCTAGCACTCG
TCGAGACTCGTCGGATATCCTTGGCATGGTCTCTATCCATACCTCTGGGT
TCATCGAGCTGTGAGGACAACTGCAGTAGTCTTCTTCGCCGCCGCAGTGT
TCTTTCCCTGAAAAAGGGGTTTCGATTGTGTATGTATGCCGATCCTGAAA
CGTGCCACACGCAGGGGCTGGCTTTCGCGACCGTGTCTGGCATCCCCATC
CTTTACGGGCTCTACATCGTGTGGGCCCCGCCCTTCTTCTACTCGCTCTT
CGGGGTCAGCCTCCACGTCAGCTACGGCCCGTTCGCCCTCGTGGGGCTCT
TCATCAGCGACGCGCTGCGCATCCGGGGCTACCAGCCGTGCGACGGCCTG
TGCCGCGACCAGCCGGAGGAGACTAAGGTATGTTCTTGTTCCGCGTGCTG
TCGTTGGTGTCTAACGCCAGAGAGGATGATCGTTTGTTGTGCATGCTGTT
GGTCTCGTTGTTATTGGTTTTTTGTTACAATGGTTGTTGTTGAGACCACC
TTTATAAAGGTTGAAACTCCCCAACGTCTGTCGAGGACGATGCCCTCTTT
TCCACAATGGCGTCGACGAAGAGATGTCAGCGTGTCTGCTTTTGGTTGCT
AAAGACACGGGTTCAAGACCTGCTGCTCACCTAATTTTCTTCCGGAGTAC
GGAAAAAAGAAAAACGGTGGGTGGGCCAAGAAACGATGCACTGTCTATCG
AACTCGAAACTTCTGGCAATGCGTGGCGGAAGTGACGCACCCGCACACAC
GCACAGAACATGGTTGGAAAAACGGTGGTTCTACTCGCCGCCAGCCGGTC
GGGTTCCGGTTACCCCAAGAAGACTGCTCTTGCCTAGCAAA back to topCoding sequence (CDS) from alignment at Scaffold_358:419624..421164+ >EsuBft985_7a-0001 ID=EsuBft985_7a-0001|Name=EsuBft985_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=375bp|location=Sequence derived from alignment at Scaffold_358:419624..421164+ (Ectocarpus subulatus male Bft15b)
ATGAAGAGAAAGATGGCCAAGAGGCTCGGCAGCCCTCTGGCCGTGCTCAA
CTTCTTGCTTCCGATCACGAAGCAGCTCAACAACTACACGTCCGAGAAGT
TGGCGAGAGACGCTGTCGTGGGGTGCACCATGGCGACCCTTATGATACCA
CAGGGGCTGGCTTTCGCGACCGTGTCTGGCATCCCCATCCTTTACGGGCT
CTACATCGTGTGGGCCCCGCCCTTCTTCTACTCGCTCTTCGGGGTCAGCC
TCCACGTCAGCTACGGCCCGTTCGCCCTCGTGGGGCTCTTCATCAGCGAC
GCGCTGCGCATCCGGGGCTACCAGCCGTGCGACGGCCTGTGCCGCGACCA
GCCGGAGGAGACTAAGAGAGGATGA back to top
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