EsuBft207_8a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft207_8a-0001
Unique NameEsuBft207_8a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_358contigScaffold_358:269972..274228 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D7FUX9
ProteomeIdEsuBft207_8
Protein domainsIPR000719
Protein domainsG3DSA
Protein domainsIPR011009
Ownerapollo_admin@sb-roscoff.fr
Nb exon4
Max annot lvl2759|Eukaryota
Length194
Hectar predicted targeting categoryother localisation
Evalue1.66e-188
EggNOG OGsKOG0032@1|root,KOG0032@2759|Eukaryota
Ec32 ortholog descriptionProtein kinase domain
Ec32 orthologEc-01_008590.1
Date last modified2016-06-14
Date creation2016-06-14
Descriptionprotein serine/threonine kinase activity
COG categoryT
Cross References
External references for this mRNA
DatabaseAccession
GO0005524
GO0006468
GO0004672
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft207_8aEsuBft207_8aEctocarpus subulatus male Bft15bgeneScaffold_358 269972..274228 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft207_8a-0001EsuBft207_8Ectocarpus subulatus male Bft15bpolypeptideScaffold_358 271410..273856 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft207_8a-0001-exonagat-exon-57846Ectocarpus subulatus male Bft15bexonScaffold_358 269972..270302 -
EsuBft207_8a-0001-exonagat-exon-57850Ectocarpus subulatus male Bft15bexonScaffold_358 270488..270709 -
EsuBft207_8a-0001-exonagat-exon-57847Ectocarpus subulatus male Bft15bexonScaffold_358 271310..271423 -
EsuBft207_8a-0001-exonagat-exon-57849Ectocarpus subulatus male Bft15bexonScaffold_358 272255..272717 -
EsuBft207_8a-0001-exonagat-exon-57848Ectocarpus subulatus male Bft15bexonScaffold_358 273209..273557 -
EsuBft207_8a-0001-exonEsuBft207_8a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_358 273762..274228 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft207_8a-0001-exonagat-three_prime_utr-8094Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_358 269972..270302 -
EsuBft207_8a-0001-exonagat-three_prime_utr-8095Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_358 270488..270709 -
EsuBft207_8a-0001-exonagat-three_prime_utr-8096Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_358 271310..271409 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft207_8a-0001-cdsEsuBft207_8a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_358 271410..271423 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft207_8a-0001-exonagat-five_prime_utr-5261Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_358 273857..274228 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft207_8a-0001 ID=EsuBft207_8a-0001|Name=EsuBft207_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1946bp|location=Sequence derived from alignment at Scaffold_358:269972..274228- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TAGGTCCTCCGACCTTGCTGCCCATCTCCCACGCGCGGGTGCAACTGCTG
CAGTGCCCATCATATCAAGAGGTCAAAACCGCGGCACAACTTTCAAGTCG
ATCCATCCATCGATATCTCCGAAGTGTGACATCCTGCTGTGTTTTTCGTC
GGCATTTTTCTCACGACTTTTGACGCCCGGCAATAATTAGGGCCGAGACA
ACCCCCAGCAAAGGATCATCAGGCCCCCAACGACCAATCCGACCCTGGTG
TCCCCTTCATAAGGCAACGACGACGCTGCATGCGGTGTACAGTATTTGGT
TACACGCTCAGGATCGGCAGGAAATAAACGTCGACAAGGCCTGAACAGCA
GGGCGAGGATTAAAGAGTCAAGATGGTACCGGTGTTTGACGAGCGTTGGG
CAAAGTCGGGAAGTACCGTTGTTGCAGACGATCGCGACGACGCTGATGAA
GCCTTCGCAAGAGCGAGCCCACAATCCTGGATGCAGGAAAAGCTTGCCAT
GCTGCAGCTCCGCCTTGAGATCGACGGCGATCTCACCCGCTTTCAGCCCC
CACAAGTGTTCGTCGTCAACATCGAGGACGGCGCAGTTGGGTCCCTGTTG
CTAACGACGACCGAGCTGTTTTACAGTCACCAGGCAATCCTGAATTCGGC
GGGTTGTTGCCCCAATGATTTATCTATGCCTTTGCCGTGCGACGTCCTTC
GCGGGAGCGATTTTCGCATCTCCGAGCGGTACCGTTGCGTCGCGGACAGC
AAAGGTCAAGCACAGGGGGGTGTGGGCTTCATTTTCGAGGGGTTGGACAT
GCTCGACGGCAGCAAGGTTGCCGTCAAGTTTTTCCACAAATCGAACGACC
ACGCCGCGACGATGCGGACGAATATGGAGCTCATCACGTGCCTGAAGCTG
TACCACGGCCTCTATTCCCACTGCATCGACCGGCGCGACAACGTAGACCG
CTGCCACCTCGTGAGGCTCCACGACGTCCTCGTTGATGCGCCCATCTTCG
AAGAACGTAACGCCAACGAAGGCGGAGGCGGCGGCGGCGGTCGGGTGGCA
GCCGGTCTTTCCCCCTCGATCTTTCGGGCAACGGTCATGGTGTTCGAGTG
GGCGGACGGCGGGGACGCCCACTCTCTGGTGCGAGAGGCAGGTGGCGGGA
TACCCGCCGCCGACGGCGCGAGGCTGTTTCGGCAGGTCTTGCGGGGGCTA
AGGGCTCTCCACAGAAGAAAAATCGTTCACAGGGACGTAAAGGTGCGAGT
GAGTCGCGTCGGCAGGCTTGCTAAAACAGCGCGCACCCGCTAATCGGTAC
CGTCGCTGTTGTCCAAGAAACGATAGAAAAAGTAGGCAAGCATCCACGCA
AGCAGCCCCCCTGCTGTCAGCTCCCGAAATTCACCCCGAGCTACGAACAA
TCATTATCATGAAACCAAGCAAAAAAAAAAAAAAATGCGCACACGCCGTG
GCATACACGTTTTCTGCATCAAAGTGCACGGTGCGCTAGCAAGGGAAAAA
CAGAACAAAAAAATATATGCGAAGCCAAATGGCGAAGCTAAAACGTACAT
GCCTGCCCACAAAACCGAACAAAGTCGTAAACGTTTCACATGTTTTCCCA
CTTGGCTGTAACAAGGTGAGGTCGTCGCTGTCACCGTGTCCTCCTCGTGC
CCGGTCGACTCGAGGGCGCCACCGCTGCTGCCGCCGCTGCCATCGCCGCC
GTTGCCGTTCCCCCGCCTCCACGACCGTCATGAGTTCCAGCGCCAACGGC
TGCCGCTGACGTCGCTGCTGCCGCCTCTACCACCGCCGCCGTTGTCGCCG
CTGCCGCCGACGAGGCTCTGGCCGAAGCTGCCGCTGCCATCTGCTGCTGC
CGTCGGAGCTTGGCCGAAGCCACCACTCCCGTCGCTGCTCCTGCTGCCGC
CGGTGCTGCCGCCGGAGCTCTGGCCGAAGCCGCCACTCTCGTCGCT
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protein sequence of EsuBft207_8a-0001

>EsuBft207_8 ID=EsuBft207_8|Name=EsuBft207_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=306bp
MVPVFDERWAKSGSTVVADDRDDADEAFARASPQSWMQEKLAMLQLRLEI
DGDLTRFQPPQVFVVNIEDGAVGSLLLTTTELFYSHQAILNSAGCCPNDL
SMPLPCDVLRGSDFRISERYRCVADSKGQAQGGVGFIFEGLDMLDGSKVA
VKFFHKSNDHAATMRTNMELITCLKLYHGLYSHCIDRRDNVDRCHLVRLH
DVLVDAPIFEERNANEGGGGGGGRVAAGLSPSIFRATVMVFEWADGGDAH
SLVREAGGGIPAADGARLFRQVLRGLRALHRRKIVHRDVKVRVSRVGRLA
KTARTR
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mRNA from alignment at Scaffold_358:269972..274228-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft207_8a-0001 ID=EsuBft207_8a-0001|Name=EsuBft207_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4257bp|location=Sequence derived from alignment at Scaffold_358:269972..274228- (Ectocarpus subulatus male Bft15b)
TAGGTCCTCCGACCTTGCTGCCCATCTCCCACGCGCGGGTGCAACTGCTG
CAGTGCCCATCATATCAAGAGGTCAAAACCGCGGCACAACTTTCAAGTCG
ATCCATCCATCGATATCTCCGAAGTGTGACATCCTGCTGTGTTTTTCGTC
GGCATTTTTCTCACGACTTTTGACGCCCGGCAATAATTAGGGCCGAGACA
ACCCCCAGCAAAGGATCATCAGGCCCCCAACGACCAATCCGACCCTGGTG
TCCCCTTCATAAGGCAACGACGACGCTGCATGCGGTGTACAGTATTTGGT
TACACGCTCAGGATCGGCAGGAAATAAACGTCGACAAGGCCTGAACAGCA
GGGCGAGGATTAAAGAGTCAAGATGGTACCGGTGTTTGACGAGCGTTGGG
CAAAGTCGGGAAGTACCGTTGTTGCAGACGATCGCGACGACGCTGATGAA
GCCTTCGCAAGAGCGAGGTGAGTGCCAACGAGCGCCTCTGACTTGTTTGT
GGGTGTTATATTGGCACCAAGGCAATAAGTTGTTTCCGTTGGTCATGATC
CACGCAACAACATGCCGTTGCGATGCGCACTGACTATTCCACACAAAATG
TTCAACCCGCATCGCTCGATTGTATCCTTAGCGTCAATAATTCTGTCGCC
CGCTTCCTCCCTTTCTTTCAGCCCACAATCCTGGATGCAGGAAAAGCTTG
CCATGCTGCAGCTCCGCCTTGAGATCGACGGCGATCTCACCCGCTTTCAG
CCCCCACAAGTGTTCGTCGTCAACATCGAGGACGGCGCAGTTGGGTCCCT
GTTGCTAACGACGACCGAGCTGTTTTACAGTCACCAGGCAATCCTGAATT
CGGCGGGTTGTTGCCCCAATGATTTATCTATGCCTTTGCCGTGCGACGTC
CTTCGCGGGAGCGATTTTCGCATCTCCGAGCGGTACCGTTGCGTCGCGGA
CAGCAAAGGTCAAGCACAGGGGGGTGTGGGCTTCATTTTCGAGGGGTTGG
ACATGCTCGACGGCAGCAAGGTATGTACGCCCCAATTTCTCCCCCCGAGT
TCCCGTGCGAGTCGTGTATCTTGCGCTCGTCGGCGGAGTAATATGTGTAC
CCAGATTGGCAAGAAACATTGATACTTTTTTATACCGCAGGAGGCGCGCT
AGGGGGACATCAGCGACCGGAAATTGTTCCTGTAGAGCAGCGTAGGCTAT
GTTATGCTTCTGCTTAACGTTTTCGTGCCCCACCGCCGTTGTATCATACC
ACGCTAGGCGTGACTTAGTTTTATATTATTTCCTCTCGGCAGCGCCCGCA
GAGAACCCGCCACGCGGGCTGTTTCTGCTAGCTCCGTAAGCACACCGAGG
AGCACCGACTATGATGCGAACATTCTCCTTCCAACGAGACGCACCCTCCT
TCCTCTCCTTTCCTAGCTGTTGACTTCATGTTCTTCGGCCGACCTCGTCA
TATCTCCACTTCATCCACCCCATACGTGCGACACGCCACGTTGAACTCGG
ACCAATCGCAGGTTGCCGTCAAGTTTTTCCACAAATCGAACGACCACGCC
GCGACGATGCGGACGAATATGGAGCTCATCACGTGCCTGAAGCTGTACCA
CGGCCTCTATTCCCACTGCATCGACCGGCGCGACAACGTAGACCGCTGCC
ACCTCGTGAGGCTCCACGACGTCCTCGTTGATGCGCCCATCTTCGAAGAA
CGTAACGCCAACGAAGGCGGAGGCGGCGGCGGCGGTCGGGTGGCAGCCGG
TCTTTCCCCCTCGATCTTTCGGGCAACGGTCATGGTGTTCGAGTGGGCGG
ACGGCGGGGACGCCCACTCTCTGGTGCGAGAGGCAGGTGGCGGGATACCC
GCCGCCGACGGCGCGAGGCTGTTTCGGCAGGTCTTGCGGGGGCTAAGGGC
TCTCCACAGAAGAAAAATCGTTCACAGGGACGTAAAGGTGCGAGTGAGTC
GCGTCGGCAGGCTTGCTAAAACAGGTATTCTTGGAACATTCCTTCTTCCG
AAATATGGTTTGCCATGATATTGCTTGTGTACCACAGCCCTTTATAAAGT
ATTTTGGGGTCCCGCCTCTCCGTGTAAAGCATGTCGTGTCTGCTTTGTTA
GTGTGCACTGCCGCCCTCGGCGGTCTGTGGTGATGAGACTGGGTGCAATG
TTATCCCAGGAACAGCAGACGAAAAAGGACCATGTATGATATAGACTATC
CGTCACGCAAGCCCCTCAGGCAAGTGTCGGGAGCACACCGCCGTGTGCTC
ACCCGGGGGGACCGCACTTGGACCCCAACCGCAAGACATACCCATCAAAT
CCATACTTCCCATACACGTATCCCCCACAGAGGGTGCACAGATCGGACCC
ATATCCAAGTACCACAAACAGCCCCCCAACGTGATACGATGTACGATCTT
GGAACCCTTCGCGCGCAATCAGCCAACACAGAAAAACACCCTTTGAGAAA
ACTTACTCAACAAAACTGGCTACACATTCAACACAAAGCGTCTCCATCAG
TTTATTCACGAATCCAACGCGTTCGTCTCTGGAAATAATCTCAAACCGTT
GACACAAAGGCATCATCCTCAGAAAGGTACCCAACAATTATTTGTGCTAC
ATCAGATGGCGTCGGAACGAAAACGGATATTTCTGGAAAAAACAATTTTG
CAAGAGTTGGCACCAAATCCTCAAACAAAACAAAAACTCAACTTCTTGAC
AAATCAAAACGAGAATTTGGAAAGCACAACGGCCCCGACCATTAATCGTC
AAAACATGTCAAATCTTTCCTCCAATACAGTGTCCAAGGATCAAATCCTA
AACAGCGCGCACCCGCTAATCGGTACCGTCGCTGTTGTCCAAGAAACGAT
AGAAAAAGTAGGCAAGCATCCACGCAAGCAGCCCCCCTGCTGTCAGCTCC
CGAAATTCACCCCGAGCTAGTATCTCGATGCCAAAAGCCCCCTTGCTTTG
CCGTTCACCTAACACACAAGTAGGCATGACCAGAAAGCAAACCGATTCGA
TTGCTGCTCATGCCCTCTAGAATCATGGTCATACGTGACATCCCCCCCCA
TGATTTTCGATGCAAGAGCAGCAAAGCATGCGGTACAAAGCAGAACATGA
AAACACGTAGCACACAAGGCATCAAACTCCAGAAAAAGTTCGTACCGTAT
GCAAACTGTCTCCTCAACTGGAAATCCGAAAGCAACCCTGCTCCCTGATC
GGTATGCCTTCATGCATGTCAAACAACGCGCTATCATCCCATTTCGTGCG
CGCGGCCAGAAACACACCGCAGAGAGCGACCACTTAACTCAGGACCTCAC
ATAAAAGCCAATGTATCGAAACATTCCAAGTGCAAAGTGTCCAGTTCGTA
GAAAAAAAAACTCGACTGAACATACTCTCTCCAAAGAATACGGAAATAGC
ATGAAGCATTCAACTGCAAGGTTCAACGCCACTGAAAACATACCAAGAAC
CAAGGGAAAAAAAATACCCACGTGCTGCTTCCTATTCCACAGGTTGTGGC
AATGATTATCTTGTCGCAGCGAACAATCATTATCATGAAACCAAGCAAAA
AAAAAAAAAAATGCGCACACGCCGTGGCATACACGTTTTCTGCATCAAAG
TGCACGGTGCGCTAGCAAGGGAAAAACAGAACAAAAAAATATATGCGAAG
CCAAATGGCGAAGCTAAAACGTACATGCCTGCCCACAAAACCGAACAAAG
TCGTAAACGTTTCACATGTTTTCCCACTTGGCTGTAACAAGGTGAGGTCG
TCGCTGTCACCGTGTCCTCCTCGTGCNCATCAAAGTGCACGGTGCGCTAG
CAAGGGAAAAACAGAACAAAAAAATATATGCGAAGCCAAATGGCGAAGCT
AAAACGTACATGCCTGCCCACAAAACCGAACAAAGTCGTAAACGTTTCAC
ATGTTTTCCCACTTGGCTGTAACAAGGTGAGGTCGTCGCTGTCACCGTGT
CCTCCTCGTGCCCGGTCGACTCGAGGGCGCCACCGCTGCTGCCGCCGCTG
CCATCGCCGCCGTTGCCGTTCCCCCGCCTCCACGACCGTCATGAGTTCCA
GCGCCAACGGCTGCCGCTGACGTCGCTGCTGCCGCCTCTACCACCGCCGC
CGTTGTCGCCGCTGCCGCCGACGAGGCTCTGGCCGAAGCTGCCGCTGCCA
TCTGCTGCTGCCGTCGGAGCTTGGCCGAAGCCACCACTCCCGTCGCTGCT
CCTGCTGCCGCCGGTGCTGCCGCCGGAGCTCTGGCCGAAGCCGCCACTCT
CGTCGCT
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Coding sequence (CDS) from alignment at Scaffold_358:269972..274228-

>EsuBft207_8a-0001 ID=EsuBft207_8a-0001|Name=EsuBft207_8a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=921bp|location=Sequence derived from alignment at Scaffold_358:269972..274228- (Ectocarpus subulatus male Bft15b)
ATGGTACCGGTGTTTGACGAGCGTTGGGCAAAGTCGGGAAGTACCGTTGT
TGCAGACGATCGCGACGACGCTGATGAAGCCTTCGCAAGAGCGAGCCCAC
AATCCTGGATGCAGGAAAAGCTTGCCATGCTGCAGCTCCGCCTTGAGATC
GACGGCGATCTCACCCGCTTTCAGCCCCCACAAGTGTTCGTCGTCAACAT
CGAGGACGGCGCAGTTGGGTCCCTGTTGCTAACGACGACCGAGCTGTTTT
ACAGTCACCAGGCAATCCTGAATTCGGCGGGTTGTTGCCCCAATGATTTA
TCTATGCCTTTGCCGTGCGACGTCCTTCGCGGGAGCGATTTTCGCATCTC
CGAGCGGTACCGTTGCGTCGCGGACAGCAAAGGTCAAGCACAGGGGGGTG
TGGGCTTCATTTTCGAGGGGTTGGACATGCTCGACGGCAGCAAGGTTGCC
GTCAAGTTTTTCCACAAATCGAACGACCACGCCGCGACGATGCGGACGAA
TATGGAGCTCATCACGTGCCTGAAGCTGTACCACGGCCTCTATTCCCACT
GCATCGACCGGCGCGACAACGTAGACCGCTGCCACCTCGTGAGGCTCCAC
GACGTCCTCGTTGATGCGCCCATCTTCGAAGAACGTAACGCCAACGAAGG
CGGAGGCGGCGGCGGCGGTCGGGTGGCAGCCGGTCTTTCCCCCTCGATCT
TTCGGGCAACGGTCATGGTGTTCGAGTGGGCGGACGGCGGGGACGCCCAC
TCTCTGGTGCGAGAGGCAGGTGGCGGGATACCCGCCGCCGACGGCGCGAG
GCTGTTTCGGCAGGTCTTGCGGGGGCTAAGGGCTCTCCACAGAAGAAAAA
TCGTTCACAGGGACGTAAAGGTGCGAGTGAGTCGCGTCGGCAGGCTTGCT
AAAACAGCGCGCACCCGCTAA
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