EsuBft207_14a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Species	Type	Position
EsuBft207_14a	EsuBft207_14a	Ectocarpus subulatus male Bft15b	gene	Scaffold_358 227324..232480 +

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
EsuBft207_14a-0001	EsuBft207_14	Ectocarpus subulatus male Bft15b	polypeptide	Scaffold_358 227324..232480 +

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
EsuBft207_14a-0001-exon	agat-exon-57876	Ectocarpus subulatus male Bft15b	exon	Scaffold_358 227324..227599 +
EsuBft207_14a-0001-exon	agat-exon-57875	Ectocarpus subulatus male Bft15b	exon	Scaffold_358 227827..228066 +
EsuBft207_14a-0001-exon	agat-exon-57874	Ectocarpus subulatus male Bft15b	exon	Scaffold_358 228446..228598 +
EsuBft207_14a-0001-exon	agat-exon-57873	Ectocarpus subulatus male Bft15b	exon	Scaffold_358 229221..229391 +
EsuBft207_14a-0001-exon	EsuBft207_14a-0001-exon	Ectocarpus subulatus male Bft15b	exon	Scaffold_358 229804..230195 +
EsuBft207_14a-0001-exon	agat-exon-57878	Ectocarpus subulatus male Bft15b	exon	Scaffold_358 230525..230657 +
EsuBft207_14a-0001-exon	agat-exon-57877	Ectocarpus subulatus male Bft15b	exon	Scaffold_358 232223..232480 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
EsuBft207_14a-0001-cds	EsuBft207_14a-0001-cds	Ectocarpus subulatus male Bft15b	CDS	Scaffold_358 227324..227599 +

Sequences

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_358:227324..232480+
coding sequence from alignment at Scaffold_358:227324..232480+

spliced messenger RNA

>EsuBft207_14a-0001 ID=EsuBft207_14a-0001|Name=EsuBft207_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1623bp|location=Sequence derived from alignment at Scaffold_358:227324..232480+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGGCGCCCACGACGGGGAGATCACAGCCCCTCCTGGGCGCCGGAGCAGG
GGCGCCCACGGCCGGCTTCGTGACAAACTCCGGCCTCGTGCTGCAGTTCG
ATGCGTATTTCAAGGAGGCGGTAGACGAGTCGCCGCTGGAGAACCACCGT
GTTCGAAAATGCAAGATCTTGGTCTACCTGGAGGACTCGTCGGTGCAGAT
CGACGAGTACCGGCAGGAAAACAGCGGGATGCCCCAAGGGACGTTGGTCA
AGCGACATCAAATACCCTACCCTGAGGGAAGACCTGGGACTTACACCGTA
GACGACATCGCCGTAGGAGGCACGATCGAGGTCTACGGCCGGCGGTTTCA
CGTGGTGGACGCCAACGGCACCACTCGCCGGCTCCTCCAGGAGCGTCTGG
GCCGGTTCGAGGCGCCGGCGATACCGTTCCCGGTCGACCGCTACTCAGTC
GAGCGCAAGGAGTTCATGTCGCGACAGACGGGATGTGATCCCACGGTCCA
GCACAAGATTATCAAGAACGACATGAAAGTCTTCGCGGAGGCAACTCTGG
GGAACACGGTAGACAACAGCAAGAGGGCCGGCTTCATCAAGTACGACCGC
AACGTGCTTCGGTTCCAGGCCGTGTGGGACGACCGCGAGAGTCTGTACGG
AGACATACAGCGGTTTGAGATGCACTATTTCCTGGCGGACGACACAATCG
AGATCCGAGCCGTGCACGGCCCCAACTCTGGGAGGGACCCCGTCCCGGTG
ATGGTGAAGAGGGGAAGGATCCCAAAGTCGATCGCCGGAGGCGCTAAGAG
CGAGGCGTACCACTGGAGCGACTTCGACATCGGGGTGGAGGCCACCAAGA
GGAGTAGCCTCCGATCTCGTCTTGTGCACCATGTCCGTCCAATTCCCACG
GCTGCCGCCGACACGCCTCCACACAACCCTAACTGCCGGCGCAACCAAAA
AACACAGCTGAACGTGTACGAGCGGCCGCTGGTTCTGGTGGATGCCGACG
GCCACACCAGAGAGTTCTACAACACCAAGGGCGTTCACCTGGGCGACCCG
ATCCCCCCGTCGCCGGTGTCCGTTCCCGTCATCGAGCCCCCCCTGCTCCC
TCCGTCTGTGGAATGCTTCACCGGAGGCGACGACGACGACGAGCTGGCGT
CGCGGTCGACCTCGCTCATCCCGAGTCCGCCGCGAAAAATTAGGGGCGAG
GACGTCATGTTCCGGTACACGGCCGAGCTTAAGACGGGCGTTCCGGAAGA
CGAGGGGAGGCGTTTCATCATCACGTACTTCAAGGCGGATCGTACGGTGG
TTGTGAGGGAGCCCCCCAAGAGAAACAGCGGCATCATAGGCGGCAACTTC
CTCAGCCGCATGAAGGTGCGGGACGCGTCGGGCAACGTGATCACCGAGTG
CTCCTTCTACGTCGGCGCGGAGGTGACCTTCCACGGCCATTGCTTCCGAG
TCACGGCCGCGGACGACAAAACCCTGCGAAACATGGAGGAGAGGGCCAAT
GCCCCCGGTGGTTTCATCCACTCAGACCCCGTCAAGGCTGCGGAGAACCT
CGCCAGCTGGGTCGACGGGCGGGCCGACCAAGTCAGAGCGTTCCTCCGCG
AGCGTGATCTCAAGGTGGGCTGA

protein sequence of EsuBft207_14a-0001

>EsuBft207_14 ID=EsuBft207_14|Name=EsuBft207_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=540bp
MAPTTGRSQPLLGAGAGAPTAGFVTNSGLVLQFDAYFKEAVDESPLENHR
VRKCKILVYLEDSSVQIDEYRQENSGMPQGTLVKRHQIPYPEGRPGTYTV
DDIAVGGTIEVYGRRFHVVDANGTTRRLLQERLGRFEAPAIPFPVDRYSV
ERKEFMSRQTGCDPTVQHKIIKNDMKVFAEATLGNTVDNSKRAGFIKYDR
NVLRFQAVWDDRESLYGDIQRFEMHYFLADDTIEIRAVHGPNSGRDPVPV
MVKRGRIPKSIAGGAKSEAYHWSDFDIGVEATKRSSLRSRLVHHVRPIPT
AAADTPPHNPNCRRNQKTQLNVYERPLVLVDADGHTREFYNTKGVHLGDP
IPPSPVSVPVIEPPLLPPSVECFTGGDDDDELASRSTSLIPSPPRKIRGE
DVMFRYTAELKTGVPEDEGRRFIITYFKADRTVVVREPPKRNSGIIGGNF
LSRMKVRDASGNVITECSFYVGAEVTFHGHCFRVTAADDKTLRNMEERAN
APGGFIHSDPVKAAENLASWVDGRADQVRAFLRERDLKVG

mRNA from alignment at Scaffold_358:227324..232480+

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft207_14a-0001 ID=EsuBft207_14a-0001|Name=EsuBft207_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=5157bp|location=Sequence derived from alignment at Scaffold_358:227324..232480+ (Ectocarpus subulatus male Bft15b)
ATGGCGCCCACGACGGGGAGATCACAGCCCCTCCTGGGCGCCGGAGCAGG
GGCGCCCACGGCCGGCTTCGTGACAAACTCCGGCCTCGTGCTGCAGTTCG
ATGCGTATTTCAAGGAGGCGGTAGACGAGTCGCCGCTGGAGAACCACCGT
GTTCGAAAATGCAAGATCTTGGTCTACCTGGAGGACTCGTCGGTGCAGAT
CGACGAGTACCGGCAGGAAAACAGCGGGATGCCCCAAGGGACGTTGGTCA
AGCGACATCAAATACCCTACCCTGAGGTGCGAGCAGTACTGAAGAAATTC
AGCAGTCTGTCGATGTACAATGTATGAAGTCTTGTTTGTGAGTAGTGTTT
TTTCAAAATGCTTCTGTTCTGCCTTTTTTCTTACCATATCATTGTAGACT
TTTCCTTCGTATCTTCACGTACGGTATGCCCTCCCGCGACTAGTGCGGCC
AAAAATCCTCCCTCGTTTTCTTCCTCTCTCACGTGTGGGGGCTGTCGTCA
AAGGGAAGACCTGGGACTTACACCGTAGACGACATCGCCGTAGGAGGCAC
GATCGAGGTCTACGGCCGGCGGTTTCACGTGGTGGACGCCAACGGCACCA
CTCGCCGGCTCCTCCAGGAGCGTCTGGGCCGGTTCGAGGCGCCGGCGATA
CCGTTCCCGGTCGACCGCTACTCAGTCGAGCGCAAGGAGTTCATGTCGCG
ACAGACGGGATGTGATCCCACGGTCCAGCACAAGATTATCAAGGTTCGGG
AGAAAGGACGGTCTAGATAGAGGACCCCTGGGTCGGTCCCAAGCGGCAAA
AACATACTATTGTGTGCTATTTTTGTTCCTCACGACTATTATTTTGCATG
TTTTGAGGTGCTGTATTTTGTTCGTCAAGACTAATATATTTGCGTGTGTT
TCCCTCAAGGAGACATGCCGCGCTAGCTTCTCTGAGGAGTAAGGGCAACC
CATTCACGAGGGTTACTTGATCTTGCTTTCGTCCCACAGGATTTCGCACG
CATCTGTTTATCCTCCTCCCTCCTCCTCGAAGTTCTGATTTTTGCAACAC
CCGGCCGAAAAAGAATTTGCCGTGGTTACCCGCCCCCGCACAACCCCCCC
ACGTGACTACAACGCTGTGCAGAACGACATGAAAGTCTTCGCGGAGGCAA
CTCTGGGGAACACGGTAGACAACAGCAAGAGGGCCGGCTTCATCAAGTAC
GACCGCAACGTGCTTCGGTTCCAGGCCGTGTGGGACGACCGCGAGAGTCT
GTACGGAGACATACAGCGGTTTGAGGTAGGTTGACATGCCATGCAGAAGG
AGGATGGAACAAATGCGATGGGCTCGTTTCCACCGGCCAGATTTTTGGCC
TGGTCTCGGCTTTCTTTGTCGTTCACTACGCTGCGGTGCTGTTCGTCAAA
CGCCGTTGCCGGCGTGGCGGCACAACCGCACTCGTGGGTCATTGTCAAGC
GTCGTTACTTGGGCAAATTGGAGGGGGCCATGGTAGGAAACTTCCTTACA
AAGGAGTTGTGCGTGGAACCGATGCAACACTGCAAGCGTTGGTCGCACTA
CATTATCCTGACCTGAACATGCTTCAGGAGACAATCCCACGCCAGAACCC
CTACGAGCCAGAGGATCGGTGTTTCGGCTCCCTAGGGAGATCAGTCCGGT
GGTCGCACAGCCTGAAAAAGTGCGGCGAGGTTTCCTCTCCTGTGGGATGC
TCGCAACATAGGATCGTAGTGGCCCAAGCTTCACCTCTGCAAGGTCCCTT
TTGGACGTTCCTCGACCAGCCGCTCTCAAGTATATTGCCATGTCCCCTGT
GACCGTTTTGCTCGTGCCGGCGCGCGTCTTGCACACCGCAATACCAACGC
CACAAAACTGAAGTGTTGTTACATGTGGCACGACGCGTGTCTGCCAGATG
CACTATTTCCTGGCGGACGACACAATCGAGATCCGAGCCGTGCACGGCCC
CAACTCTGGGAGGGACCCCGTCCCGGTGATGGTGAAGAGGGGAAGGATCC
CAAAGTCGATCGCCGGAGGCGCTAAGAGCGAGGCGTACCACTGGAGCGAC
TTCGACATCGGGGTGGAGGTGAACGAAGGAAAACGCTTGGTTGTTTAGGT
TGTTTACCGGGAGTAGTTGGGTTTCTGCGGTCCGGCATCCACCACAAGGT
GCGGGCGGCGCGCGCGGACATCGCTCGCTCTTCGACTACAGGAGAACGGT
CTTGCTATGCGTAGCCTAGGATTTAAGCATGGGCAAAGAGAGTTTCGTCT
GGTTCTTGATTCTCGATACCGCGGGTATTTCGTGCGGGCTAGGGGGCGGG
TGCGTGGGTGCACGCGCAACACGTGAACATAGCCAGAAACTGTCAACCGA
CACAGTCAAACCGGCTCAGATCCTGAAAAACGAGCAGGGTCGAAATATCT
GGCTGCCTGGAAGTGGATAGGGGAATGCGTTCTGCCCAAGGTGGACACGT
AAAACCAGTGGCAACAACTTGGAGGTGTAGGCCACCAAGAGGAGTAGCCT
CCGATCTCGTCTTGTGCACCATGTCCGTCCAATTCCCACGGCTGCCGCCG
ACACGCCTCCACACAACCCTAACTGCCGGCGCAACCAAAAAACACAGCTG
AACGTGTACGAGCGGCCGCTGGTTCTGGTGGATGCCGACGGCCACACCAG
AGAGTTCTACAACACCAAGGGCGTTCACCTGGGCGACCCGATCCCCCCGT
CGCCGGTGTCCGTTCCCGTCATCGAGCCCCCCCTGCTCCCTCCGTCTGTG
GAATGCTTCACCGGAGGCGACGACGACGACGAGCTGGCGTCGCGGTCGAC
CTCGCTCATCCCGAGTCCGCCGCGAAAAATTAGGGGCGAGGACGTCATGT
TCCGGTACACGGCCGAGCTTAAGTGAGTTTTACGTCGGATTTCCTATTCA
ATTATTCGAGACTTCGGGGGGTTGTAACTACTGTAGACTTCTGATCTGTG
TTGCAGTAAGTTGGTTTGGGCTGTGGTACGGTGCGCGACCAGCGCAGAAC
CACCGGCGCCTCCAAAAGATCCGGCGGCTCTCTTCTCCAGCTTGTAGCTC
GTTTCTTTTTCAGACGTCACAGTTGCGCAGGGGTGACAAAGGGCGCTAGC
GTATCATGTACACATTGCCTCTACAGTACATCCCATGATACTACTGCAGT
GCTGTAAGCACGACCACAAACGAAAACGCACCCATGCGTAAAATTGAGCA
GGACGGGCGTTCCGGAAGACGAGGGGAGGCGTTTCATCATCACGTACTTC
AAGGCGGATCGTACGGTGGTTGTGAGGGAGCCCCCCAAGAGAAACAGCGG
CATCATAGGCGGCAACTTCCTCAGCCGCATGAAGGTACATAGATCAGTTT
GGTCGAGAGCTTTCACTGGTTAGGAAGCACGGTTGTAAGTGAGAGCGGAG
CGAGCCAGAGGCCGCGGGAAGTGAGTCCCGCCGCCTACCCCCGGCTCGCC
GGTCTTGGTTGTGCTATATGCTAGCCAGCCTCGGATGGGCGTAACGGCTT
TCGCTGGGCATTGCACGGTCCGGCGTGTGCTTTGCGTTTCGAGCGGTTTC
TGCCGGGGGGGGGGGGGGGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGATTCTGT
TCTTCTCTCTCGGCACAAGCAACATATATCTTCTCCTTGAACCCCTGTAG
ACCCTCCGTTTCCAGCGTTTCATCTTCGTCGATGTCGAGCCCCTTCCATA
CGTCCTCTACAACCTTGACCCATTCCGTGGGTTGTCTACCCCTCTTTTTG
TTTGCCCACTTCGCCTCCCATACAATTCTCGGCAACCTCTCCTCTCCCAT
CCCGCACATGCGATACTGCCATGTCAGCTTCCTCGCGTCTCTTCCAGACC
GTAGGGATTGGATCCCCAGTTCTGCCCTCACGGCTGCATTACTTGTGCGC
CTGGAGCATCCTAGGATGATTTTCGCTGATTTTATTTGCGCCGCCTCTAG
TTCTTTCACTACCTTCTTATTTCCTTCCCACACTTCTCCGGCGTACTCTA
GCGGCCGTACGATTACGCTCTTCAAAACCGTCAATTTGATGCGTATATCG
AGGTGCCGGTTTGCGAGTATTGGGTGCAGCTTCCCTGCTCGTGCTTTGCC
CTGGTTTGTGCCGGGGATCGGGCCATTGACGGTCTGCAAGTATCGCTGAC
CAAGGGAAAGTCTGTCACGCCTGATCTACTCTCGTAGAGGCGTCAAGAAA
AAATGAAGATATCAAGACCAAATCGAATCGTCACAACGTGTACCTATACC
ATTCCGATGGAAGCAACACAATAATATACCCAAGGGAACACGATAATCAA
TTTTTCTTCTCGATGTCATCATGATTGTAACGTCGTTGCCGTTGACAAGG
TGCGGGACGCGTCGGGCAACGTGATCACCGAGTGCTCCTTCTACGTCGGC
GCGGAGGTGACCTTCCACGGCCATTGCTTCCGAGTCACGGCCGCGGACGA
CAAAACCCTGCGAAACATGGAGGAGAGGGCCAATGCCCCCGGTGGTTTCA
TCCACTCAGACCCCGTCAAGGCTGCGGAGAACCTCGCCAGCTGGGTCGAC
GGGCGGGCCGACCAAGTCAGAGCGTTCCTCCGCGAGCGTGATCTCAAGGT
GGGCTGA

Coding sequence (CDS) from alignment at Scaffold_358:227324..232480+

>EsuBft207_14a-0001 ID=EsuBft207_14a-0001|Name=EsuBft207_14a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1623bp|location=Sequence derived from alignment at Scaffold_358:227324..232480+ (Ectocarpus subulatus male Bft15b)
ATGGCGCCCACGACGGGGAGATCACAGCCCCTCCTGGGCGCCGGAGCAGG
GGCGCCCACGGCCGGCTTCGTGACAAACTCCGGCCTCGTGCTGCAGTTCG
ATGCGTATTTCAAGGAGGCGGTAGACGAGTCGCCGCTGGAGAACCACCGT
GTTCGAAAATGCAAGATCTTGGTCTACCTGGAGGACTCGTCGGTGCAGAT
CGACGAGTACCGGCAGGAAAACAGCGGGATGCCCCAAGGGACGTTGGTCA
AGCGACATCAAATACCCTACCCTGAGGGAAGACCTGGGACTTACACCGTA
GACGACATCGCCGTAGGAGGCACGATCGAGGTCTACGGCCGGCGGTTTCA
CGTGGTGGACGCCAACGGCACCACTCGCCGGCTCCTCCAGGAGCGTCTGG
GCCGGTTCGAGGCGCCGGCGATACCGTTCCCGGTCGACCGCTACTCAGTC
GAGCGCAAGGAGTTCATGTCGCGACAGACGGGATGTGATCCCACGGTCCA
GCACAAGATTATCAAGAACGACATGAAAGTCTTCGCGGAGGCAACTCTGG
GGAACACGGTAGACAACAGCAAGAGGGCCGGCTTCATCAAGTACGACCGC
AACGTGCTTCGGTTCCAGGCCGTGTGGGACGACCGCGAGAGTCTGTACGG
AGACATACAGCGGTTTGAGATGCACTATTTCCTGGCGGACGACACAATCG
AGATCCGAGCCGTGCACGGCCCCAACTCTGGGAGGGACCCCGTCCCGGTG
ATGGTGAAGAGGGGAAGGATCCCAAAGTCGATCGCCGGAGGCGCTAAGAG
CGAGGCGTACCACTGGAGCGACTTCGACATCGGGGTGGAGGCCACCAAGA
GGAGTAGCCTCCGATCTCGTCTTGTGCACCATGTCCGTCCAATTCCCACG
GCTGCCGCCGACACGCCTCCACACAACCCTAACTGCCGGCGCAACCAAAA
AACACAGCTGAACGTGTACGAGCGGCCGCTGGTTCTGGTGGATGCCGACG
GCCACACCAGAGAGTTCTACAACACCAAGGGCGTTCACCTGGGCGACCCG
ATCCCCCCGTCGCCGGTGTCCGTTCCCGTCATCGAGCCCCCCCTGCTCCC
TCCGTCTGTGGAATGCTTCACCGGAGGCGACGACGACGACGAGCTGGCGT
CGCGGTCGACCTCGCTCATCCCGAGTCCGCCGCGAAAAATTAGGGGCGAG
GACGTCATGTTCCGGTACACGGCCGAGCTTAAGACGGGCGTTCCGGAAGA
CGAGGGGAGGCGTTTCATCATCACGTACTTCAAGGCGGATCGTACGGTGG
TTGTGAGGGAGCCCCCCAAGAGAAACAGCGGCATCATAGGCGGCAACTTC
CTCAGCCGCATGAAGGTGCGGGACGCGTCGGGCAACGTGATCACCGAGTG
CTCCTTCTACGTCGGCGCGGAGGTGACCTTCCACGGCCATTGCTTCCGAG
TCACGGCCGCGGACGACAAAACCCTGCGAAACATGGAGGAGAGGGCCAAT
GCCCCCGGTGGTTTCATCCACTCAGACCCCGTCAAGGCTGCGGAGAACCT
CGCCAGCTGGGTCGACGGGCGGGCCGACCAAGTCAGAGCGTTCCTCCGCG
AGCGTGATCTCAAGGTGGGCTGA