Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 588596.U9UK42 |
| ProteomeId | EsuBft4845_2 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 5 |
| Max annot lvl | 4751|Fungi |
| Length | 168 |
| Evalue | 2.87e-21 |
| EggNOG OGs | 29JY0@1|root,2RT6R@2759|Eukaryota,39VBJ@33154|Opisthokonta,3P12S@4751|Fungi |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft4845_2a-0001 ID=EsuBft4845_2a-0001|Name=EsuBft4845_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1686bp|location=Sequence derived from alignment at Scaffold_358:1162..4179- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGACAGAGCAACAGGGGTGTGGGCAGGAAGGAGGCTCTTCGCAAGCTGC
GAAGCATCGATCGCAGCTGGAAAAGGCGGCCGCAGCATCTGCTGCATGTA
GATCGGGCTGGGAGCGGGGGCAGGATTATTTCCGCGCCGTCATCAAGGAA
TGCCAATCCGCTGTAGCAGTCACATCTGCTGGACTCAATGAGTATGTTAT
CGTCTCGCATGCGCAAGCCGGCAGCCTGCAGTTCAAGGTCTTGGTTCTGA
AAGGACTGTATCACAAGCTGCTCAGGGGGGTGTCCAAGAGGCAAGCTTTC
GAGGAAATGGCGGAGTTTTTGAAGTGGCATCCAGCACCCTCCGTGAGTGG
GAGCTTTCCTATCGCACCAAGGGCCATATCCAGGACGAGTGCACCTACAG
GGCCAACGACGGCCAGCGTTTCGCGTGGGTGCCACCCAACTATTACGCGC
TCAAAAAGCNCGGCGTACTTTGAGCACCGCGACTACATGGAGATCTGGAT
CGAGGCGACTACGGACGAGGCGCGGTCCTGGGAGGTGCAAGTGCAAGAGA
AGGACAGGCAAGAAGATGGACGTGTTTGGGTTTGCGTGCATGCCTTCAAG
GAGACCCTCTCCGAATTTCCTCTGCATCTCCGCGAGAGGGTCACCAGCAA
AAAAACTTACTCTGACGGCAGAAGAGCGATCTTCTGCTACCAGGACGAGT
GCACCTACAGGGCCAACGACGGCCAGCGTTTCGCGTGGGTGCCACCCAAC
TATTACGCGCTCAAAAAGCAGGGAGACGGTCAAGGCATTATGATCTCTGG
CACCATCGTCGACAACGTGGGATTCGTTGCGGGTGACCAGGCTGATATCG
ACAAGGCGCAAACCTTGCGGCGTAAGCGGTGCGATACTTGGGCACCCGAA
CACGCGGCAGGTGACCCGACCAAGCCAGAGACGTATCGTAACATCGACAA
GCTCTACAAGGACGAAGATGGCAAGTTCTGGACCTACTACAGATTCGAGT
ACGGCAAGAGCAGGGACGGCTACTGGACGGGTGCGAATTTGGTTGAACAA
ATGGCAGATGTATTGGACCTCTTGGCGGTTAAGTATCCGAAGCCCATCTG
CTTTTTCGACTGGTCATCTCGCCACGACTACTGTATCGAAGACGGGGCAC
CGAGCGCAACTCGCATGAACGCGGGGTACGGGGGGGACACGCCCAAACTC
AAGAAAGGGACGGTGCAGTACCTCACCTTTCAGGAGGGCGAGAGTCCTTT
CTACGACCCGGGTGCCGAGGATTACATTGGCAAGCTCAAGGGGCTAAAGC
AAGTTTTGTTTGAGAGGGGGCTCTGGAACGCGGACATGAGCACGAAAGGA
ATCAAGAAAGGCCAACAGAAGTATGACCCAGCGTTGTGTATGCCGGTGGT
GTTGGGTACGCAGGAGGACTTCGCGAGCGTAGAGCCTAGCCTAGTGGTGT
TAGTGAAGCGCCATGGAGGAGTGGCAATCATGCTCCCCAAGTTCCACTGC
GAGATCAACCCGATAGAGCTGGTGTGGGGTAGATCCAAGTATTGGGTCCG
GCAGCACTGCAAGACGGTGGCCAACTTCAAAGAGGTGAACTGCGACGGAC
TCCAGGGCGCGGAAGCAGTACAGAAGAGGGACACCTTTAAGTCTCACCGC
AAGCCAACTCCGTCAGAGTACATTAACCCTAAGTGA back to topprotein sequence of EsuBft4845_2a-0001 >EsuBft4845_2 ID=EsuBft4845_2|Name=EsuBft4845_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=561bp
MTEQQGCGQEGGSSQAAKHRSQLEKAAAASAACRSGWERGQDYFRAVIKE
CQSAVAVTSAGLNEYVIVSHAQAGSLQFKVLVLKGLYHKLLRGVSKRQAF
EEMAEFLKWHPAPSVSGSFPIAPRAISRTSAPTGPTTASVSRGCHPTITR
SKSXAYFEHRDYMEIWIEATTDEARSWEVQVQEKDRQEDGRVWVCVHAFK
ETLSEFPLHLRERVTSKKTYSDGRRAIFCYQDECTYRANDGQRFAWVPPN
YYALKKQGDGQGIMISGTIVDNVGFVAGDQADIDKAQTLRRKRCDTWAPE
HAAGDPTKPETYRNIDKLYKDEDGKFWTYYRFEYGKSRDGYWTGANLVEQ
MADVLDLLAVKYPKPICFFDWSSRHDYCIEDGAPSATRMNAGYGGDTPKL
KKGTVQYLTFQEGESPFYDPGAEDYIGKLKGLKQVLFERGLWNADMSTKG
IKKGQQKYDPALCMPVVLGTQEDFASVEPSLVVLVKRHGGVAIMLPKFHC
EINPIELVWGRSKYWVRQHCKTVANFKEVNCDGLQGAEAVQKRDTFKSHR
KPTPSEYINPK back to topmRNA from alignment at Scaffold_358:1162..4179- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft4845_2a-0001 ID=EsuBft4845_2a-0001|Name=EsuBft4845_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3018bp|location=Sequence derived from alignment at Scaffold_358:1162..4179- (Ectocarpus subulatus male Bft15b)
ATGACAGAGCAACAGGGGTGTGGGCAGGAAGGAGGCTCTTCGCAAGCTGC
GAAGCATCGATCGCAGCTGGAAAAGGCGGCCGCAGCATCTGCTGCATGTA
GATCGGGCTGGGAGCGGGGGCAGGATTATTTCCGCGCCGTCATCAAGGAA
TGCCAATCCGCTGTAGCAGTCACATCTGCTGGACTCAATGTAAGAGATGT
TGGGCTACACGATGCAGTGTAAATGTATGCATGCGTTGATCGCAGTTTTC
GTGCTGCAAGCACTGCTGTTGGTTGTAATACTGTGCGGTTGTCGCTATGC
TGCTCCTGCTGCTGCCGTATGTATGATGTGATGCCACCCATGTACATGTC
TGGGTGAAGTTGCGCGCGACTGTTGGGCCGTAAGAACCACTCCGCCCCCA
CTCTTGTCTTTCATCCCCGCTGCTTGTCCCCATGATCTTACCATTGATTT
TGCCCCCTTTCCCACCTGACGTACATGCAGGAGTATGTTATCGTCTCGCA
TGCGCAAGCCGGCAGCCTGCAGTTCAAGGTCTTGGTTCTGAAAGGACTGT
ATCACAAGCTGCTCAGGGGGGTGTCCAAGAGGCAAGCTTTCGAGGAAATG
GCGGAGTTTTTGAAGTGGCATCCAGCACCCTCCGTGAGTGGGAGCTTTCC
TATCGCACCAAGGGCCATATCCAGGTGAGAGGAGTTATGTACCAGACATC
CGTTTCAACCGCAATGAAAGATGTGCGTGCCGTAGACTCTGAATGTGGCG
ATGAACATAAAATGGTACTGCTGTAGCTCAACAAGCTCGCCGGCCGTTGC
CGTGAACATGCTCCCTCCGTGCAACGCATGCACTATTGCTCCCTTTCCAT
CCCGCACCCGTGCATGCTTTTGAGCCACCCTTTCCCTTTTTCTCGACAAT
GCGGTGTTCTTTGTCGCGTGCACCCTTGCTGTATTTGAAGGTGGACCAGA
GGGGGAAACACGAACGGCGGTGGATCCTGAGCTTGGACGAGGGGCTTCTC
GTGATGGTACGCCAATGGATCCAGGTGAACTCTATCAAAAATGGGGAGCC
CAACATGACAGCCGAGGGCTTCCGCGAGTACCTCAACAAGGACGTCTTGC
CACAGGTAGCAGACACCAAAACGTGCGACTACGACCCCTTCAAGCACGCT
CCTGTCACCAAGACGACGACTGAAACGACATCAGGAATGATAGTGATGGC
GTACTCGGTGACCGTTCGCACGGCGCGCTCCTGACTGCACAAGCTGGGGT
GCGAGTACCGCCATCACAAGTCGGGCCTGTACTTTAACGGCCATGACCGC
GAAGAGGTACTCGCGTACCGGGTCGAGAAGTACCTCCCGGCGTACTTTGA
GCACCGCGACTACATGGAGATCTGGATCGAGGCGACTACGGACGAGGCGC
GGTCCTGGGAGGTGCAAGTGCAAGAGAAGGACAGGCAAGAAGATGGACGT
GTTTGGGTTTGCGTGCATGCCTTCAAGGAGACCCTCTCCGAATTTCCTCT
GCATCTCCGCGAGAGGGTCACCAGCAAAAAAACTTACTCTGACGGCAGAA
GAGCGATCTTCTGCTACCAGGACGAGTGCACCTACAGGGCCAACGACGGC
CAGCGTTTCGCGTGGGTGCCACCCAACTATTACGCGCTCAAAAAGCNCGG
CGTACTTTGAGCACCGCGACTACATGGAGATCTGGATCGAGGCGACTACG
GACGAGGCGCGGTCCTGGGAGGTGCAAGTGCAAGAGAAGGACAGGCAAGA
AGATGGACGTGTTTGGGTTTGCGTGCATGCCTTCAAGGAGACCCTCTCCG
AATTTCCTCTGCATCTCCGCGAGAGGGTCACCAGCAAAAAAACTTACTCT
GACGGCAGAAGAGCGATCTTCTGCTACCAGGACGAGTGCACCTACAGGGC
CAACGACGGCCAGCGTTTCGCGTGGGTGCCACCCAACTATTACGCGCTCA
AAAAGCAGGGAGACGGTCAAGGCATTATGATCTCTGGCACCATCGTCGAC
AACGTGGGATTCGTTGCGGGTGACCAGGCTGATATCGACAAGGCGCAAAC
CTTGCGGCGTAAGCGGTGCGATACTTGGGCACCCGAACACGCGGCAGGTG
ACCCGACCAAGCCAGAGACGTATCGTAACATCGACAAGCTCTACAAGGAC
GAAGATGGCAAGTTCTGGACCTACTACAGATTCGAGTACGGCAAGAGCAG
GGACGGCTACTGGACGGGTGCGAATTTGGTTGAACAAATGGCAGATGTAT
TGGACCTCTTGGCGGTTAAGTATCCGAAGCCCATCTGCTTTTTCGACTGG
TCATCTCGCCACGACTACTGTATCGAAGACGGGGCACCGAGCGCAACTCG
CATGAACGCGGGGTACGGGGGGGGTGAGGAAGGGTAAACAGCTAGCTGTC
CAGGACGCTACGACCCTATTGGCAGACACGCCCAAACTCAAGAAAGGGAC
GGTGCAGTACCTCACCTTTCAGGAGGGCGAGAGTCCTTTCTACGACCCGG
GTGCCGAGGATTACATTGGCAAGCTCAAGGGGCTAAAGCAAGTTTTGTTT
GAGAGGGGGCTCTGGAACGCGGACATGAGCACGAAAGGAATCAAGAAAGG
CCAACAGAAGTATGACCCAGCGTTGTGTATGCCGGTGGTGTTGGGTACGC
AGGAGGACTTCGCGAGCGTAGAGCCTAGCCTAGTGGTGTTAGTGAAGCGC
CATGGAGGAGTGGCAATCATGCTCCCCAAGTTCCACTGCGAGATCAACCC
GATAGAGCTGGTGTGGGGTAGATCCAAGTATTGGGTCCGGCAGCACTGCA
AGTACACTATCGCGTGCTTGCAGACCAACGTTTCTTAAAGCTACGCGGTG
GCCGGAGACCGCTTGAGGCTAGCAATTGTGCAAGAGATCTGCAGGACGGT
GGCCAACTTCAAAGAGGTGAACTGCGACGGACTCCAGGGCGCGGAAGCAG
TACAGAAGAGGGACACCTTTAAGTCTCACCGCAAGCCAACTCCGTCAGAG
TACATTAACCCTAAGTGA back to topCoding sequence (CDS) from alignment at Scaffold_358:1162..4179- >EsuBft4845_2a-0001 ID=EsuBft4845_2a-0001|Name=EsuBft4845_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1686bp|location=Sequence derived from alignment at Scaffold_358:1162..4179- (Ectocarpus subulatus male Bft15b)
ATGACAGAGCAACAGGGGTGTGGGCAGGAAGGAGGCTCTTCGCAAGCTGC
GAAGCATCGATCGCAGCTGGAAAAGGCGGCCGCAGCATCTGCTGCATGTA
GATCGGGCTGGGAGCGGGGGCAGGATTATTTCCGCGCCGTCATCAAGGAA
TGCCAATCCGCTGTAGCAGTCACATCTGCTGGACTCAATGAGTATGTTAT
CGTCTCGCATGCGCAAGCCGGCAGCCTGCAGTTCAAGGTCTTGGTTCTGA
AAGGACTGTATCACAAGCTGCTCAGGGGGGTGTCCAAGAGGCAAGCTTTC
GAGGAAATGGCGGAGTTTTTGAAGTGGCATCCAGCACCCTCCGTGAGTGG
GAGCTTTCCTATCGCACCAAGGGCCATATCCAGGACGAGTGCACCTACAG
GGCCAACGACGGCCAGCGTTTCGCGTGGGTGCCACCCAACTATTACGCGC
TCAAAAAGCNCGGCGTACTTTGAGCACCGCGACTACATGGAGATCTGGAT
CGAGGCGACTACGGACGAGGCGCGGTCCTGGGAGGTGCAAGTGCAAGAGA
AGGACAGGCAAGAAGATGGACGTGTTTGGGTTTGCGTGCATGCCTTCAAG
GAGACCCTCTCCGAATTTCCTCTGCATCTCCGCGAGAGGGTCACCAGCAA
AAAAACTTACTCTGACGGCAGAAGAGCGATCTTCTGCTACCAGGACGAGT
GCACCTACAGGGCCAACGACGGCCAGCGTTTCGCGTGGGTGCCACCCAAC
TATTACGCGCTCAAAAAGCAGGGAGACGGTCAAGGCATTATGATCTCTGG
CACCATCGTCGACAACGTGGGATTCGTTGCGGGTGACCAGGCTGATATCG
ACAAGGCGCAAACCTTGCGGCGTAAGCGGTGCGATACTTGGGCACCCGAA
CACGCGGCAGGTGACCCGACCAAGCCAGAGACGTATCGTAACATCGACAA
GCTCTACAAGGACGAAGATGGCAAGTTCTGGACCTACTACAGATTCGAGT
ACGGCAAGAGCAGGGACGGCTACTGGACGGGTGCGAATTTGGTTGAACAA
ATGGCAGATGTATTGGACCTCTTGGCGGTTAAGTATCCGAAGCCCATCTG
CTTTTTCGACTGGTCATCTCGCCACGACTACTGTATCGAAGACGGGGCAC
CGAGCGCAACTCGCATGAACGCGGGGTACGGGGGGGACACGCCCAAACTC
AAGAAAGGGACGGTGCAGTACCTCACCTTTCAGGAGGGCGAGAGTCCTTT
CTACGACCCGGGTGCCGAGGATTACATTGGCAAGCTCAAGGGGCTAAAGC
AAGTTTTGTTTGAGAGGGGGCTCTGGAACGCGGACATGAGCACGAAAGGA
ATCAAGAAAGGCCAACAGAAGTATGACCCAGCGTTGTGTATGCCGGTGGT
GTTGGGTACGCAGGAGGACTTCGCGAGCGTAGAGCCTAGCCTAGTGGTGT
TAGTGAAGCGCCATGGAGGAGTGGCAATCATGCTCCCCAAGTTCCACTGC
GAGATCAACCCGATAGAGCTGGTGTGGGGTAGATCCAAGTATTGGGTCCG
GCAGCACTGCAAGACGGTGGCCAACTTCAAAGAGGTGAACTGCGACGGAC
TCCAGGGCGCGGAAGCAGTACAGAAGAGGGACACCTTTAAGTCTCACCGC
AAGCCAACTCCGTCAGAGTACATTAACCCTAAGTGA back to top
|