EsuBft936_7a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft936_7a-0001 ID=EsuBft936_7a-0001|Name=EsuBft936_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1725bp|location=Sequence derived from alignment at Scaffold_350:188359..190405+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
ATGCCGTTCCTCGCCATCCCCACTCCCCCTTTGGTGGTCTTCAAATTGCC
TTTCGCCGCCCCCATCCCCGTGGCAGTACCTGCTGCTGTTGCCAAGCCAT
TCGCCGTCACCCCCAGACCCCCCTTCGTGGTCACCGTGACCGGCTTCGCC
GGCTTCGCCGGGGCCGCGGCAACGGTCTTCTTCGCTGCGCTCGTCACCAC
CGACTTCGGCGACGTCTGCGGTGACCTCAACGGCGATGCTCCCGGTGAAG
ACGTCGGCGAAGCAGACCCCTGGGGTAGCCTGTTAGGCAGGAGCGGGTTC
TTGGAGAAGGATGAGGACGAAGACGTGACGGATGAAGGGGAGGTCGGCGG
AGAAGACGCCTCTGCCGCGAAATGCACCACTGCCGCCGCCTTAGTGGCCG
GCGCTGCCTTCGCCGCCGGTGCCGTCGCTGCCGTCGCCGCCGGTCGTGCT
GGCAGAGCGGGAGGGTTGGGTCTCGAAGGCTTCGGTGGCGGTGACGATGA
CGGTGAAGATTGCGGCGGCAACGACGGTGACGGTGACGGTGACGGTGACG
GTGACGGTGACGATGACGGTGACGATGACGATGCAGCCTTCGCTGGGGCC
GGGGGCGCTGTTGGTATTACCGACGATGACGGCGATGCCGCCACCGCTGC
TGCTGCCGCTGCTGCCGTCGTAGCAGTGGCCGCTCCGACAGCCGCCGCAG
GGTCCCCGTTCACCGTCTGTGGTGTGGTCGTTGAAGCGATCGGGCTCGGG
GAAGCGACGGCACTACCCCCTCTGGCGTCGGCGGCGGCGGCGGCGTCCTT
CTGCTCACCGGACGTAACCGTTTTCGCTGCTGCTGCTGCTGCTGCTGCTG
TCAGCGGGCACGCCACTCGTGCTCCAGCCGCGTTGCATTCCGGCTCCAAC
GTCTTAGACGCAGCCTTTGGGGTAGACCGGAGAGGTGGCCTACTGACGAC
GGCGGCGGCGGTGGTCGTGTTGGCGGTTGCAGCAGCAGCAGTCGCCGTGC
TGGAAGAGGAGGTGTCGACTTCGGAGGCGCCACTGGCGCCGTTGCTGGGG
GCGGCCCTTGTCTTTGTGCTCTTGCTACTACCACTACCGCTCGCGGCGCC
GGGATGCCTCGTTCTCGGCGGCGACGACGATGGCGGTGGGGACACAGCCC
CGCCCCTTTGCCACATCTTGATGATCGAAGCCACCCTGCCGGGAGACTTT
TCTTCCCCCCCGCCCGTCGAGGGCGCGGTGGACGTCGGCGTCTCGGACAG
CGGCGTCGGGGGAGCAGTGCCCGGGGTCGATGTTGCGGAACCGGGGGCAT
TCTTTTTCGCGGTTGGCGTGGTGGTGACCTTTGCGCTGACAGCGGTCGCT
GTGGCGGACTTCTTGAGGACAGGAGGTGTTCGGGGACCGGTGCTGGGAGT
CGAGCTCGAGCTCGTTGGAGTCGAGGCGGCCTTCTTCAGGTCGGGGACCA
GGGCCGGTGGCGGGGTGCGCGGGGGGGTCGCCGCTGCCGCCTGCCTAGAC
TTGCCGGCCCTGTTGCCGACGCCGCCATCACCCCCACCACCCCCAAATAT
CCTCGCCAACGCCGCCGTTTTCGGGGAGAGTCTTGCCTTAGTCGGGGATG
CTGGCGGGGGCACCGCGGAGATGTTTAGAGGCGCGGGAGCGGCTGTCGAA
CAGGTCGTCTGTCGAAAGTTCGAGGAGGAGGGGGAGGCCTCTCTGCTGAC
GACGTCACTGTTCTTGATGCCTTAG
back to top

protein sequence of EsuBft936_7a-0001

>EsuBft936_7 ID=EsuBft936_7|Name=EsuBft936_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=574bp
MPFLAIPTPPLVVFKLPFAAPIPVAVPAAVAKPFAVTPRPPFVVTVTGFA
GFAGAAATVFFAALVTTDFGDVCGDLNGDAPGEDVGEADPWGSLLGRSGF
LEKDEDEDVTDEGEVGGEDASAAKCTTAAALVAGAAFAAGAVAAVAAGRA
GRAGGLGLEGFGGGDDDGEDCGGNDGDGDGDGDGDGDDDGDDDDAAFAGA
GGAVGITDDDGDAATAAAAAAAVVAVAAPTAAAGSPFTVCGVVVEAIGLG
EATALPPLASAAAAASFCSPDVTVFAAAAAAAAVSGHATRAPAALHSGSN
VLDAAFGVDRRGGLLTTAAAVVVLAVAAAAVAVLEEEVSTSEAPLAPLLG
AALVFVLLLLPLPLAAPGCLVLGGDDDGGGDTAPPLCHILMIEATLPGDF
SSPPPVEGAVDVGVSDSGVGGAVPGVDVAEPGAFFFAVGVVVTFALTAVA
VADFLRTGGVRGPVLGVELELVGVEAAFFRSGTRAGGGVRGGVAAAACLD
LPALLPTPPSPPPPPNILANAAVFGESLALVGDAGGGTAEMFRGAGAAVE
QVVCRKFEEEGEASLLTTSLFLMP
back to top

mRNA from alignment at Scaffold_350:188359..190405+

Legend: exonpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft936_7a-0001 ID=EsuBft936_7a-0001|Name=EsuBft936_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2047bp|location=Sequence derived from alignment at Scaffold_350:188359..190405+ (Ectocarpus subulatus male Bft15b)
ATGCCGTTCCTCGCCATCCCCACTCCCCCTTTGGTGGTCTTCAAATTGCC
TTTCGCCGCCCCCATCCCCGTGGCAGTACCTGCTGCTGTTGCCAAGCCAT
TCGCCGTCACCCCCAGACCCCCCTTCGTGGTCACCGTGACCGGCTTCGCC
GGCTTCGCCGGGGCCGCGGCAACGGTCTTCTTCGCTGCGCTCGTCACCAC
CGACTTCGGCGACGTCTGCGGTGACCTCAACGGCGATGCTCCCGGTGAAG
ACGTCGGCGAAGCAGACCCCTGGGGTAGCCTGTTAGGCAGGAGCGGGTTC
TTGGAGAAGGATGAGGACGAAGACGTGACGGATGAAGGGGAGGTCGGCGG
AGAAGACGCCTCTGCCGCGAAATGCACCACTGCCGCCGCCTTAGTGGCCG
GCGCTGCCTTCGCCGCCGGTGCCGTCGCTGCCGTCGCCGCCGGTCGTGCT
GGCAGAGCGGGAGGTGCTGGCCGCGCCACCGGCTTTGCTGTTGTTGTTGT
TGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGTTG
TCGTCGTTGTTGTTGCGCGTGCGACAGGGTTGGGTCTCGAAGGCTTCGGT
GGCGGTGACGATGACGGTGAAGATTGCGGCGGCAACGACGGTGACGGTGA
CGGTGACGGTGACGGTGACGGTGACGATGACGGTGACGATGACGATGCAG
CCTTCGCTGGGGCCGGGGGCGCTGTTGGTATTACCGACGATGACGGCGAT
GCCGCCACCGCTGCTGCTGCCGCTGCTGCCGTCGTAGCAGTGGCCGCTCC
GACAGCCGCCGCAGGGTCCCCGTTCACCGTCTGTGGTGTGGTCGTTGAAG
CGATCGGGCTCGGGGAAGCGACGGCACTACCCCCTCTGGCGTCGGCGGCG
GCGGCGGCGTCCTTCTGCTCACCGGACGTAACCGTTTTCGCTGCTGCTGC
TGCTGCTGCTGCTGTCAGCGGGCACGCCACTCGTGCTCCAGCCGCGTTGC
ATTCCGGCTCCAACGTCTTAGACGCAGCCTTTGGGGTAGACCGGAGAGGT
GGCCTACTGACGACGGCGGCGGCGGTGGTCGTGTTGGCGGTTGCAGCAGC
AGCAGTCGCCGTGCTGGAAGAGGAGGTGTCGACTTCGGAGGCGCCACTGG
CGCCGTTGCTGGGGGCGGCCCTTGTCTTTGTGCTCTTGCTACTACCACTA
CCGCTCGCGGCGCCGGGATGCCTCGTTCTCGGCGGCGACGACGATGGCGG
TGGGGACACAGCCCCGCCCCTTTGCCACATCTTGATGATCGAAGCCACCC
TGCCGGGAGACTTTTCTTCCCCCCCGCCCGTCGAGGGCGCGGTGGACGTC
GGCGTCTCGGACAGCGGCGTCGGGGGAGCAGTGCCCGGGGTCGATGTTGC
GGAACCGGGGGCATTCTTTTTCGCGGTTGGCGTGGTGGTGACCTTTGCGC
TGACAGCGGTCGCTGTGGCGGACTTCTTGAGGACAGGAGGTGTTCGGGGA
CCGGTGCTGGGAGTCGAGCTCGAGCTCGTTGGAGTCGAGGCGGCCTTCTT
CAGGTCGGGGACCAGGGCCGGTGGCGGGGTGCGCGGGGGGGTCGCCGCTG
CCGCCTGCCTAGACTTGCCGGCCCTGTTGCCGACGCCGCCATCACCCCCA
CCACCCCCAAATATCCTCGCCAACGCCGCCGTTTTCGGGGAGAGTCTTGC
CTTAGTCGGGGATGCTGGCGGGGGCACCGCGGAGATGTTTAGAGGCGCGG
GAGCGGCTGTCGAACAGGTTCCGATGTCTGGCGGCTGCACTGCCGCTGTA
TCCGCTGGAGTTGATGCTGCTGCGGTCTTTGTTGTTGTCTGCTTTGTTGG
TGTCTTTGCCGCCGCTGCTGGTGCCGCTGGTGCTGATTTTCCTGGCGAGC
TCGGAGCCGCGGCCGTCGCAGTCGTAGCTGCTGGTGCCGGTGCTGGTGCT
GACGGTTTACCACCTTGGAGGTTAGGTCGTCTGTCGAAAGTTCGAGGAGG
AGGGGGAGGCCTCTCTGCTGACGACGTCACTGTTCTTGATGCCTTAG
back to top

Coding sequence (CDS) from alignment at Scaffold_350:188359..190405+

>EsuBft936_7a-0001 ID=EsuBft936_7a-0001|Name=EsuBft936_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1725bp|location=Sequence derived from alignment at Scaffold_350:188359..190405+ (Ectocarpus subulatus male Bft15b)
ATGCCGTTCCTCGCCATCCCCACTCCCCCTTTGGTGGTCTTCAAATTGCC
TTTCGCCGCCCCCATCCCCGTGGCAGTACCTGCTGCTGTTGCCAAGCCAT
TCGCCGTCACCCCCAGACCCCCCTTCGTGGTCACCGTGACCGGCTTCGCC
GGCTTCGCCGGGGCCGCGGCAACGGTCTTCTTCGCTGCGCTCGTCACCAC
CGACTTCGGCGACGTCTGCGGTGACCTCAACGGCGATGCTCCCGGTGAAG
ACGTCGGCGAAGCAGACCCCTGGGGTAGCCTGTTAGGCAGGAGCGGGTTC
TTGGAGAAGGATGAGGACGAAGACGTGACGGATGAAGGGGAGGTCGGCGG
AGAAGACGCCTCTGCCGCGAAATGCACCACTGCCGCCGCCTTAGTGGCCG
GCGCTGCCTTCGCCGCCGGTGCCGTCGCTGCCGTCGCCGCCGGTCGTGCT
GGCAGAGCGGGAGGGTTGGGTCTCGAAGGCTTCGGTGGCGGTGACGATGA
CGGTGAAGATTGCGGCGGCAACGACGGTGACGGTGACGGTGACGGTGACG
GTGACGGTGACGATGACGGTGACGATGACGATGCAGCCTTCGCTGGGGCC
GGGGGCGCTGTTGGTATTACCGACGATGACGGCGATGCCGCCACCGCTGC
TGCTGCCGCTGCTGCCGTCGTAGCAGTGGCCGCTCCGACAGCCGCCGCAG
GGTCCCCGTTCACCGTCTGTGGTGTGGTCGTTGAAGCGATCGGGCTCGGG
GAAGCGACGGCACTACCCCCTCTGGCGTCGGCGGCGGCGGCGGCGTCCTT
CTGCTCACCGGACGTAACCGTTTTCGCTGCTGCTGCTGCTGCTGCTGCTG
TCAGCGGGCACGCCACTCGTGCTCCAGCCGCGTTGCATTCCGGCTCCAAC
GTCTTAGACGCAGCCTTTGGGGTAGACCGGAGAGGTGGCCTACTGACGAC
GGCGGCGGCGGTGGTCGTGTTGGCGGTTGCAGCAGCAGCAGTCGCCGTGC
TGGAAGAGGAGGTGTCGACTTCGGAGGCGCCACTGGCGCCGTTGCTGGGG
GCGGCCCTTGTCTTTGTGCTCTTGCTACTACCACTACCGCTCGCGGCGCC
GGGATGCCTCGTTCTCGGCGGCGACGACGATGGCGGTGGGGACACAGCCC
CGCCCCTTTGCCACATCTTGATGATCGAAGCCACCCTGCCGGGAGACTTT
TCTTCCCCCCCGCCCGTCGAGGGCGCGGTGGACGTCGGCGTCTCGGACAG
CGGCGTCGGGGGAGCAGTGCCCGGGGTCGATGTTGCGGAACCGGGGGCAT
TCTTTTTCGCGGTTGGCGTGGTGGTGACCTTTGCGCTGACAGCGGTCGCT
GTGGCGGACTTCTTGAGGACAGGAGGTGTTCGGGGACCGGTGCTGGGAGT
CGAGCTCGAGCTCGTTGGAGTCGAGGCGGCCTTCTTCAGGTCGGGGACCA
GGGCCGGTGGCGGGGTGCGCGGGGGGGTCGCCGCTGCCGCCTGCCTAGAC
TTGCCGGCCCTGTTGCCGACGCCGCCATCACCCCCACCACCCCCAAATAT
CCTCGCCAACGCCGCCGTTTTCGGGGAGAGTCTTGCCTTAGTCGGGGATG
CTGGCGGGGGCACCGCGGAGATGTTTAGAGGCGCGGGAGCGGCTGTCGAA
CAGGTCGTCTGTCGAAAGTTCGAGGAGGAGGGGGAGGCCTCTCTGCTGAC
GACGTCACTGTTCTTGATGCCTTAG
back to top