Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2347_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 70 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2347_5a-0001 ID=EsuBft2347_5a-0001|Name=EsuBft2347_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=702bp|location=Sequence derived from alignment at Scaffold_347:185537..186359+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ACCCATCTGGGGGGCTGCTGTACCCCTCATCTGGGTTGTGGTGCCTAGGC
GTGCTGCGCCTGTCTGACTGGCGTGCTGGAGGCGGTGGTGGTATGCCCGA
GCCGGAGGGTGGATCAGTGGCCAACAAGGGTGGGCAGCGTGCTGGGGGCA
AGGCGAAGCAGAAGCCTAACGACGAAGGTTCCACTCATCTCTGTTGGACG
CCTGCGGAGAAAGTCGTACTCTGGAAGGCGATCCAGAAACACAATCCTTT
TGCAGAGAGTGGGCAGAAGCTGGTGAGAAAACATTGGCGTAGGGCAGCCG
CTTTCGTCATCGAGGACCAGGACGTGGAGGTGTACACGAACGAAGGAGGC
AGGGAGACCGTCCTCGTGTGTTGCGCTCACGTTCTCCTTGTCGGTCGTAC
GGTAAGGGTCAGCATTACTTTGAACCTCCTAGTAGTGCGAGGCAGTGGTC
CCACGAGAACATTTCCCACATGACGTGCTCGTGTTTGACGTAGAAGGTGT
TTCGTCTATGCCGGAACAAGGTGCCACACTTTTCATTGTACGTTCATGTC
TGCTGTGAGTTTCTGGAGACGGGGGGGAGAGATTCCAGGCTCCCGCCACG
TTCTGAACTGCTAATTCTGGCGCAAGATAAAATACTGCTACACTATGCAT
GAGGGAGTTACGCCTATTACCACTGTATGCATAGCACTGACATGGCCGCC
AG back to topprotein sequence of EsuBft2347_5a-0001 >EsuBft2347_5 ID=EsuBft2347_5|Name=EsuBft2347_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=126bp
MPEPEGGSVANKGGQRAGGKAKQKPNDEGSTHLCWTPAEKVVLWKAIQKH
NPFAESGQKLVRKHWRRAAAFVIEDQDVEVYTNEGGRETVLVCCAHVLLV
GRTVRVSITLNLLVVRGSGPTRTFPT back to topmRNA from alignment at Scaffold_347:185537..186359+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2347_5a-0001 ID=EsuBft2347_5a-0001|Name=EsuBft2347_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=823bp|location=Sequence derived from alignment at Scaffold_347:185537..186359+ (Ectocarpus subulatus male Bft15b)
ACCCATCTGGGGGGCTGCTGTACCCCTCATCTGGGTTGTGGTGCCTAGGC
GTGCTGCGCCTGTCTGACTGGCGTGCTGGAGGCGGTGGTGGTATGCCCGA
GCCGGAGGGTGGATCAGTGGCCAACAAGGGTGGGCAGCGTGCTGGGGGCA
AGGCGAAGCAGAAGCCTAACGACGAAGGTCAGTAATGATCACACAGCAGG
TCGAACTGAAGTTCTGCTCTACTCTTGCTGTAAAAGTGCAGACAAGAGCC
TGTCCTGACGCTCATCGATACGTACGCCCTCCTCCTGCACCTCGCCAGGT
TCCACTCATCTCTGTTGGACGCCTGCGGAGAAAGTCGTACTCTGGAAGGC
GATCCAGAAACACAATCCTTTTGCAGAGAGTGGGCAGAAGCTGGTGAGAA
AACATTGGCGTAGGGCAGCCGCTTTCGTCATCGAGGACCAGGACGTGGAG
GTGTACACGAACGAAGGAGGCAGGGAGACCGTCCTCGTGTGTTGCGCTCA
CGTTCTCCTTGTCGGTCGTACGGTAAGGGTCAGCATTACTTTGAACCTCC
TAGTAGTGCGAGGCAGTGGTCCCACGAGAACATTTCCCACATGACGTGCT
CGTGTTTGACGTAGAAGGTGTTTCGTCTATGCCGGAACAAGGTGCCACAC
TTTTCATTGTACGTTCATGTCTGCTGTGAGTTTCTGGAGACGGGGGGGAG
AGATTCCAGGCTCCCGCCACGTTCTGAACTGCTAATTCTGGCGCAAGATA
AAATACTGCTACACTATGCATGAGGGAGTTACGCCTATTACCACTGTATG
CATAGCACTGACATGGCCGCCAG back to topCoding sequence (CDS) from alignment at Scaffold_347:185537..186359+ >EsuBft2347_5a-0001 ID=EsuBft2347_5a-0001|Name=EsuBft2347_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=381bp|location=Sequence derived from alignment at Scaffold_347:185537..186359+ (Ectocarpus subulatus male Bft15b)
ATGCCCGAGCCGGAGGGTGGATCAGTGGCCAACAAGGGTGGGCAGCGTGC
TGGGGGCAAGGCGAAGCAGAAGCCTAACGACGAAGGTTCCACTCATCTCT
GTTGGACGCCTGCGGAGAAAGTCGTACTCTGGAAGGCGATCCAGAAACAC
AATCCTTTTGCAGAGAGTGGGCAGAAGCTGGTGAGAAAACATTGGCGTAG
GGCAGCCGCTTTCGTCATCGAGGACCAGGACGTGGAGGTGTACACGAACG
AAGGAGGCAGGGAGACCGTCCTCGTGTGTTGCGCTCACGTTCTCCTTGTC
GGTCGTACGGTAAGGGTCAGCATTACTTTGAACCTCCTAGTAGTGCGAGG
CAGTGGTCCCACGAGAACATTTCCCACATGA back to top
|