Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2064_4 |
| Protein domains | NON_CYTOPLASMIC_DOMAIN |
| Protein domains | SignalP-TM |
| Protein domains | SIGNAL_PEPTIDE |
| Protein domains | SIGNAL_PEPTIDE_H_REGION |
| Protein domains | SIGNAL_PEPTIDE_N_REGION |
| Protein domains | SIGNAL_PEPTIDE_C_REGION |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 68 |
| Hectar predicted targeting category | mitochondrion |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2064_4a-0001 ID=EsuBft2064_4a-0001|Name=EsuBft2064_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=684bp|location=Sequence derived from alignment at Scaffold_347:32421..33104- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCCGTACTCTCTGCTTCTGCTTCCCTCGCGCGCTGGCGCTTCGCGGA
CGCTTCCGCCTCCTGCCTGTGCCATTTCCTCATGAGTCATGCCGCCCCGT
CCTCGACCTTGTTGTACCACACCTCCGGGTCCTTGGCGCTCTCTTTCCAT
TTACCCCCTTCCTTTTCGTCTCCCATGTTGAAGGCCACGAGGTCCTCTCC
TAGACGAGACACCCAGTCGCTCTCCTGCCCGCCCCGGTATCCCACGCCCC
CCGCCATCGCTCCTAACAGCATGCGCTTGGGGAGGCGGTTGTCCTCCATG
CGCATAACGAAGCCCGCCAAACACAGTCTCCGTTTGCGCACGGTGGCCTC
GATGGTTTCCTCGCAGCCTGCCTGGATGAGGGCCTGGGCATAGGACAGGG
GACGGTCTGAGCGTTTCCGCTTGCCCCAGCCGATGCTCCGTGTAAGGAAC
TGGCGGTGGGTCCCATTGAGCTTCGTGTAGTGCTCCGCTGTTGGGCTTCA
CGAGGCGCACCCATATAGGAGAGTCTCCACCACTTCAGCCTGGAGTAGCC
GGATCTTGAGCTGGCGGTTGGCCCGTCGCCTGTCGTACATCGAAGCACTG
TTCCGGCGGTAGCACTTCCACGCTCGGCAGCTGCGGCTCGTGATCTCCCG
GTCGGCCTTCCTGTCCGCGGAGATGGTACGTCCG back to topprotein sequence of EsuBft2064_4a-0001 >EsuBft2064_4 ID=EsuBft2064_4|Name=EsuBft2064_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=130bp
MAVLSASASLARWRFADASASCLCHFLMSHAAPSSTLLYHTSGSLALSFH
LPPSFSSPMLKATRSSPRRDTQSLSCPPRYPTPPAIAPNSMRLGRRLSSM
RITKPAKHSLRLRTVASMVSSQPAWMRAWA back to topmRNA from alignment at Scaffold_347:32421..33104- Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2064_4a-0001 ID=EsuBft2064_4a-0001|Name=EsuBft2064_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=684bp|location=Sequence derived from alignment at Scaffold_347:32421..33104- (Ectocarpus subulatus male Bft15b)
ATGGCCGTACTCTCTGCTTCTGCTTCCCTCGCGCGCTGGCGCTTCGCGGA
CGCTTCCGCCTCCTGCCTGTGCCATTTCCTCATGAGTCATGCCGCCCCGT
CCTCGACCTTGTTGTACCACACCTCCGGGTCCTTGGCGCTCTCTTTCCAT
TTACCCCCTTCCTTTTCGTCTCCCATGTTGAAGGCCACGAGGTCCTCTCC
TAGACGAGACACCCAGTCGCTCTCCTGCCCGCCCCGGTATCCCACGCCCC
CCGCCATCGCTCCTAACAGCATGCGCTTGGGGAGGCGGTTGTCCTCCATG
CGCATAACGAAGCCCGCCAAACACAGTCTCCGTTTGCGCACGGTGGCCTC
GATGGTTTCCTCGCAGCCTGCCTGGATGAGGGCCTGGGCATAGGACAGGG
GACGGTCTGAGCGTTTCCGCTTGCCCCAGCCGATGCTCCGTGTAAGGAAC
TGGCGGTGGGTCCCATTGAGCTTCGTGTAGTGCTCCGCTGTTGGGCTTCA
CGAGGCGCACCCATATAGGAGAGTCTCCACCACTTCAGCCTGGAGTAGCC
GGATCTTGAGCTGGCGGTTGGCCCGTCGCCTGTCGTACATCGAAGCACTG
TTCCGGCGGTAGCACTTCCACGCTCGGCAGCTGCGGCTCGTGATCTCCCG
GTCGGCCTTCCTGTCCGCGGAGATGGTACGTCCG back to topCoding sequence (CDS) from alignment at Scaffold_347:32421..33104- >EsuBft2064_4a-0001 ID=EsuBft2064_4a-0001|Name=EsuBft2064_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=393bp|location=Sequence derived from alignment at Scaffold_347:32421..33104- (Ectocarpus subulatus male Bft15b)
ATGGCCGTACTCTCTGCTTCTGCTTCCCTCGCGCGCTGGCGCTTCGCGGA
CGCTTCCGCCTCCTGCCTGTGCCATTTCCTCATGAGTCATGCCGCCCCGT
CCTCGACCTTGTTGTACCACACCTCCGGGTCCTTGGCGCTCTCTTTCCAT
TTACCCCCTTCCTTTTCGTCTCCCATGTTGAAGGCCACGAGGTCCTCTCC
TAGACGAGACACCCAGTCGCTCTCCTGCCCGCCCCGGTATCCCACGCCCC
CCGCCATCGCTCCTAACAGCATGCGCTTGGGGAGGCGGTTGTCCTCCATG
CGCATAACGAAGCCCGCCAAACACAGTCTCCGTTTGCGCACGGTGGCCTC
GATGGTTTCCTCGCAGCCTGCCTGGATGAGGGCCTGGGCATAG back to top
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