Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 3055.EDP02703 |
| ProteomeId | EsuBft2064_10 |
| Protein domains | IPR029063 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Max annot lvl | 3055.EDP02703|- |
| Length | 156 |
| Hectar predicted targeting category | other localisation |
| Evalue | 9.71e-09 |
| EggNOG OGs | 2C0D9@1|root,2RRD8@2759|Eukaryota,382HD@33090|Viridiplantae,34NJT@3041|Chlorophyta |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2064_10a-0001 ID=EsuBft2064_10a-0001|Name=EsuBft2064_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1565bp|location=Sequence derived from alignment at Scaffold_347:3425..8069+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTGGAATCCGCGATGAATCCCTCAGCAGCGTTGGTGGGACCACCGTC
GTGGCACGTGCAGTTGATACGGCATATTTCCACGCTGCCCCTCTGCTCGT
TTGCGGGGAGCAGCCGATTGCGGTGGCAAGACGACTCGATTGGACACAGC
AGTAGCGGCGTGCGCAGGAAAGGGTCGGCCCGATGGAGACTGAGGCCTTC
AGCAGCAGCAGCTGATGCAGGAGCAGACTACGGAAGGCGGCTTGACAATC
CCCGCCGCCCGGTGCCCAACGAGTACCTGGCTGGGTGGGCCTTGACACAA
AACGATACAGCCTGCCTGCAGCAGTTCCAAGACATGGGTTACACAGACTG
TGATGACCACGAGTCGTCACCCGAAGAAGCGAAAGGAGAGAAGGCAGGGT
TCCGTTTGTGGGGGGAGGCCACGAAGGCGTTGATGGACCGGGTGGACATT
GTACACGATCTTGACCAGAGGAGGCTCGCGGCTTCGCGCTACTGGCAGCG
GTTGCAGAGCACCCCGCCAAAGGAAGCACCCGCATCCAACACCGGCAACA
AAGGGAAATTTACCGACCTTGACCTCTCTCCTGGTCTGGCCGCGCCAACT
TGGGCAGACGTAAATGCTCTTTTCGAGAGCGACGACGGCTTTGTACGGCG
AGAAAGCGAACGATACATCGAGGAGGCGAGGGACGGCATGCCTTCCGAAG
GCGGGTGGAGCGGGGATCGGGTGTCGCGACAGTGGGTGGCGAGCTACCGA
CTTTCGGTCTTCGAAACCCGTAGGCAGGCCCAGCGGTTTTTCTCTTGGGG
TATCCCTGACGAGGGGAATGAAACAACCTTGAACCACTTCTACGCCATTT
GTCTTTGCCTGCTTTGCTGGAACGCCCTTGCTAATAGAGCTCTGGACTGC
ATCCTGGAGCCTAGAAAGCGGGTCCTAGAGGTCGGAAGCGGCCTGGGCTA
CTGGGCCTACCTCTTGAAGCTGCGAAGCGGAGATGACTCTCGCGTGCGCT
GCTTCGACCCGTTCGCCCCACCAGCCCGTCAACGTACCGAAGTCTCCACC
ACCGAGGACGAAAGTGGTTATTCGGTCGAAGAAGCACCACCCCGCTCGAT
CGACAACGCTCCCTCACCGGAACCAATCAGTATGCCAGAAGAAGAGGTCG
ACGACTGGTTTGGGGAGGGGCGAGAACCCTTCTCCCCGGCGGAGCGCGGG
TCGTTCGACCGAATTGCCCGCGAGGACGGGTTCCGGAACTGGTCGCTGCT
CATTTGCTGGCCGAGCGACGGGCAGTGGCCGGCCGGCTGCCTGCAGGAGT
TTGCAGGGAACGACTTCTTTTACGTGGGGGAGGGAGAGGGTGGCGCGACA
CGCATGCCTTGGCGGGTGTTGAGGGAGGAGTGGGAGATCGTGAGACGCGT
GGAGATACCCACGTGGCCAGGATTCCGGGACGCGCTCTGGTGGTACAAAA
GGAAAGAACCGGACGCCTTGTCGCGGGACCGATAGGATTACTCTCCCTAC
ACTCTTTGGGGAGCAACAAACGCACATGACGAATGCTGATGTCGATGGTT
ATTTGGCCCAGAATT back to topprotein sequence of EsuBft2064_10a-0001 >EsuBft2064_10 ID=EsuBft2064_10|Name=EsuBft2064_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=494bp
MVESAMNPSAALVGPPSWHVQLIRHISTLPLCSFAGSSRLRWQDDSIGHS
SSGVRRKGSARWRLRPSAAAADAGADYGRRLDNPRRPVPNEYLAGWALTQ
NDTACLQQFQDMGYTDCDDHESSPEEAKGEKAGFRLWGEATKALMDRVDI
VHDLDQRRLAASRYWQRLQSTPPKEAPASNTGNKGKFTDLDLSPGLAAPT
WADVNALFESDDGFVRRESERYIEEARDGMPSEGGWSGDRVSRQWVASYR
LSVFETRRQAQRFFSWGIPDEGNETTLNHFYAICLCLLCWNALANRALDC
ILEPRKRVLEVGSGLGYWAYLLKLRSGDDSRVRCFDPFAPPARQRTEVST
TEDESGYSVEEAPPRSIDNAPSPEPISMPEEEVDDWFGEGREPFSPAERG
SFDRIAREDGFRNWSLLICWPSDGQWPAGCLQEFAGNDFFYVGEGEGGAT
RMPWRVLREEWEIVRRVEIPTWPGFRDALWWYKRKEPDALSRDR back to topmRNA from alignment at Scaffold_347:3425..8069+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2064_10a-0001 ID=EsuBft2064_10a-0001|Name=EsuBft2064_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4645bp|location=Sequence derived from alignment at Scaffold_347:3425..8069+ (Ectocarpus subulatus male Bft15b)
ATGGTGGAATCCGCGATGAATCCCTCAGCAGCGTTGGTGGGACCACCGTC
GTGGCACGTGCAGTTGATACGGCATATTTCCACGCTGCCCCTCTGCTCGT
TTGCGGGGAGCAGCCGATTGCGGTGGCAAGACGACTCGATTGGACACAGC
AGTAGCGGCGTGCGCAGGAAAGGGTCGGCCCGATGGAGACTGAGGCCTTC
AGCAGCAGCAGCTGATGCAGGAGCAGACTACGGAAGGCGGGTGGGTTATT
GTCCTGCTTGCCGATATGCCAGTAGCAGGCGGTTCGGTCTCTCTCCGTTC
GAATCGCGGCACGCCACGATGATATACTTGTGTAGTAACACACGAACGAA
GAGACCGTTGAATAAGTATTTCGCATTTGAGTGTCATCTTTCCGTAGTGC
AAGAAATAGATGATCGGCGCTATGTGGCTTTTGCCACGCAATAGGCCCAA
AATAGGCCCAATGTTACCGTTTTTCCCTCCTGTTTGAGGTCTTGTCTGGA
CTATTGTAGTCTAGTCTACACCCTTCCACAACGTTCCAAACAGCAGATTC
TCGAGTTGATGGTCGTGAAAGACAACGCACGGAGAGTTCTCAACCGCGAC
ATATGTTCACCCTTGAATCAAAGGACCCATACCTCCAAGCTCTTAAAGCT
TTCACCCCCAATCCTGTTCGCGTCCGCGTTGCTTTGGCAGCTTGACAATC
CCCGCCGCCCGGTGCCCAACGAGTACCTGGCTGGGTGGGCCTTGACACAA
AACGATACAGCCTGCCTGCAGCAGTTCCAAGACATGGGTTACACAGGTGC
GATGTGACAATACCCCCCTTCGTTTAAAACATTGACCTCTTCTTGATTTT
CGTTTTTTTGTGCTGTGTTGCGATCTCCTTCAAGTATTTCCGGCCAGTGG
CGCTGATACTGACGATGTTGATGTTCCCTGTGCAGATCGACATGACCGTA
TGGATATTGTTTTGCCCTGTACACTCACCATCTATGCGTGTTTTCTCCTA
GCGATCCCCGATGCCGTTTGACATAATTCACGTGATTTAACGCCAAAAAG
CGACACCCCCCGTCCTTACTCTTCGTGAAGGTGGTGGTATCGGAAACGTT
GAAGTCCCAGCGCCTTTTAGCGGACCCCTCAATCAAGCACGTTAACCACA
TACGGTATGTAGTCGACCCTCCTACACATACACCAATCAAGCAGCTGAGG
CCAGAGAGTCAAATGCTTGTCCCGAGCTTGCTGTACCAGCGGTAGTCGCC
CCCTTGACGTCTCCCGCTGGCCCTCGGGCACTTGCCGAATTATGACATGC
CTACGAAAGCGAGGCTCAGGCAAGACCATGGGCTACATTCTAGAAGGATG
TAGGGCTACCAGTGTCTCGGACAACAAGGAGTCGGTTGTGTTTCACACAT
TCCCCCCCGGCGAGTAAGGTGAAGTTGCCTCTGCCACTGCTGCTGTGATG
CGTGCCGCTACGCAAGACTGTGATGACCACGAGTCGTCACCCGAAGAAGC
GAAAGGAGAGAAGGCAGGGTTCCGTTTGTGGGGGGAGGCCACGAAGGCGT
TGATGGACCGGGTGGACATTGTACACGATCTTGACCAGAGGAGGCTCGCG
GCTTCGCGCTACTGGCAGCGGTTGCAGGTGCATAGGTTGGGTAGGGTGCT
GCTGTTGGTGGTATTGGTGGTGGTGATTGGGGTGTTGATTACCTGTATTG
TCCACAAACCCTGGTTGACTGCCTAACTGACTCGGGTCCTCTACTCCTTC
TCGCGAACCAACTATGCCGCAGAGCACCCCGCCAAAGGAAGCACCCGCAT
CCAACACCGGCAACAAAGGGAAATTTACCGACCTTGACCTCTCTCCTGGT
CTGGCCGCGCCAACTTGGGCAGACGTAAATGCTCTTTTCGAGAGCGACGA
CGGCTTTGTACGGCGAGAAAGCGAACGATACATCGAGGAGGCGAGGGACG
GCATGCCTTCCGAAGGCGGGTGGAGCGGGGATCGGGTGTCGCGACAGTGG
GTGGCGAGCTACCGACTTTCGGTCTTCGAAACCCGTAGGCAGGCCCAGCG
GTTTTTCTCTTGGGGTATCCCTGACGAGGGGTGAGTAAGTTTGAAGTAGG
AGTAGCGTTTTGACGATCAGTCTCGGTGTTGTTTGTTTGGGCGTGGGTAA
GAGTTCGGGTTAGGGTGGGGTATCGCGCGCATGAAAAGCCAGCGTGCAAG
CTTCCCCCCGGCAACACCTCCCGTTTTTTGTGGACGAACTATGGACGTGA
GTTTTGGCCAAGTTTATTGGTACACACGAGGATGCGTCGTTTTTTTTTCG
TCTTTTCGGCGCAAGTTCGCCCCTCCTAGTGCTATCCCTTGAACCACCAA
TTCCGTCTCTTTGTGCGAGGGGCACCTTAAACACGGGGAGCAAGGTTTTC
CCTTAACGGTTTTGGCTCGCGAGAGTCTCTTGAGGGTGATCCTTGTCCCG
ATGCCAAACCTCTGTTGTGAGCGAGATAGCCGTTCGAACGAAGGTGGGCC
CCGGATTCTAATTGCGACGGCCGTTTGGGACGGGACTTCTGTATTACCCC
CCTTATGTGTATTCGGCCGATTCATGATTGTAGAGCAGATACTGACATTA
GGTAGAGTTCTGCTGTAGTCCCTCGGCAACCGTAGGAATGAAACAACCTT
GAACCACTTCTACGCCATTTGTCTTTGCCTGCTTTGCTGGAACGCCCTTG
CTAATAGAGCTCTGGACTGCATCCTGGAGCCTAGAAAGCGGGTCCTAGAG
GTCGGAAGCGGCCTGGGCTACTGGGCCTACCTCTTGAAGCTGCGAAGCGG
AGATGACTCTCGCGTGCGCTGCTTCGACCCGTTCGCCCCACCAGCCCGTC
AACGTACCGGTAACATGCCTTGCGCGCTGCCACAGGCGGCACTTTTTTTT
TTCCAGATTTTGGCAGAACACAGCTGGAAGCTTAGAGCGAACCGCTCGCG
TTCCCCTCGGATTCTCAGTGATGTTTGATTCTTTGGCCGCTTACGAGTTT
CGGAGGTAGGGGTAGTGTTGATTTGATACTTCTTGTCGGGAGCGCGCACA
ATGGCGTTCCTCGGATGGCCACGCCATCGTTTTGAACAGCAAAGCGCTTT
TCCCCGGGCAGCTAATGTAGGGGACGTCACATGAACTGCTTCAGCTGCTC
CATCAGTCTTGCTTTTCTGCAATGATATTGTAGTGTGTTTCGCCTTCCCC
GCGCAGCCCTCGTTAGGGTGTGTCTTCTCGGCAGAATCGAAACTAAAAAT
CAGAACCGAGCTTCAGTTTTAAGTCTAGAAAGAGCCAGCCAAATTCGACC
TACGTGTCTTATCGAAAAATCAGCAAAACTGAGGTTCAAATCGAGAACAC
GCCCGAACGGACGCCGAACAGCCCAACAGTCCCGATAAGCCGCGTGAGCG
ACCTGCGGGCGACGGTTTGTCCTTTTGCACAGCACTCGCACAATCATGGC
TCGCTCTCCTCCCCGCCGTGCGGGCAGCCGCTCTTGGCAGCGAGGGAAAA
TGAAGAAGCGTATGAGGCAGCTCCTGGAGCTGGTGATGTACCCAAACCCA
CCGATGGCACGGGTGGCACATGAATCCCGACTCCATGGCTCGGCGCACGC
CCGTAACAAATCGTCAACAAGTTGAACCTACCGTTGCCGTTCGCCTTCTG
TGACATCATCTTTCTGCTTGCTTGGTGGGCGTGGGTGGTGTAGCGTGTGC
AATCCGCGCGCACGTGGGCGCGCAGCGTGCGAGAAAAACGTCAACCGCCG
CAGCACGCTCCCAACAGCCCAACGTCCACCCGAAGTTGGTGGCGTTTGAC
AAAAGTCGACTCCAAATTAATCCTCTGGCCCTTTTTTCGAGATCGAGTTT
AAGAATAGGAAGATCCGTTCGCTTATCCCGAGAGAACACATTCCAACCAA
TCAGAGCAGATGGACGCTGGCTCTTTCTAGTCTTTAACTGAAAATCGATT
CTGATTTTTAACTCCGATTTTTCCGATAAGACACACCCTGAGATGAAGCG
CAACAGTTTTTCTCGTGCCGTTAGGTGGTGCTCGTTCCTTCACCAACAGA
CGGTTTCTTCAATAAATTTCAAAAATGTTAACCCTCCACATATACGTCCC
GTCGCCGACGCCGTGTCAGAAGTCTCCACCACCGAGGACGAAAGTGGTTA
TTCGGTCGAAGAAGCACCACCCCGCTCGATCGACAACGCTCCCTCACCGG
AACCAATCAGTATGCCAGAAGAAGAGGTCGACGACTGGTTTGGGGAGGGG
CGAGAACCCTTCTCCCCGGCGGAGCGCGGGTCGTTCGACCGAATTGCCCG
CGAGGACGGGTTCCGGAACTGGTCGCTGCTCATTTGCTGGCCGAGCGACG
GGCAGTGGCCGGCCGGCTGCCTGCAGGAGTTTGCAGGGAACGACTTCTTT
TACGTGGGGGAGGGAGAGGGTGGCGCGACACGCATGCCTTGGCGGGTGTT
GAGGGAGGAGTGGGAGATCGTGAGACGCGTGGAGATACCCACGTGGCCAG
GATTCCGGGACGCGCTCTGGTGGTACAAAAGGAAAGAACCGGACGCCTTG
TCGCGGGACCGATAGGATTACTCTCCCTACACTCTTTGGGGAGCAACAAA
CGCACATGACGAATGCTGATGTCGATGGTTATTTGGCCCAGAATT back to topCoding sequence (CDS) from alignment at Scaffold_347:3425..8069+ >EsuBft2064_10a-0001 ID=EsuBft2064_10a-0001|Name=EsuBft2064_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1485bp|location=Sequence derived from alignment at Scaffold_347:3425..8069+ (Ectocarpus subulatus male Bft15b)
ATGGTGGAATCCGCGATGAATCCCTCAGCAGCGTTGGTGGGACCACCGTC
GTGGCACGTGCAGTTGATACGGCATATTTCCACGCTGCCCCTCTGCTCGT
TTGCGGGGAGCAGCCGATTGCGGTGGCAAGACGACTCGATTGGACACAGC
AGTAGCGGCGTGCGCAGGAAAGGGTCGGCCCGATGGAGACTGAGGCCTTC
AGCAGCAGCAGCTGATGCAGGAGCAGACTACGGAAGGCGGCTTGACAATC
CCCGCCGCCCGGTGCCCAACGAGTACCTGGCTGGGTGGGCCTTGACACAA
AACGATACAGCCTGCCTGCAGCAGTTCCAAGACATGGGTTACACAGACTG
TGATGACCACGAGTCGTCACCCGAAGAAGCGAAAGGAGAGAAGGCAGGGT
TCCGTTTGTGGGGGGAGGCCACGAAGGCGTTGATGGACCGGGTGGACATT
GTACACGATCTTGACCAGAGGAGGCTCGCGGCTTCGCGCTACTGGCAGCG
GTTGCAGAGCACCCCGCCAAAGGAAGCACCCGCATCCAACACCGGCAACA
AAGGGAAATTTACCGACCTTGACCTCTCTCCTGGTCTGGCCGCGCCAACT
TGGGCAGACGTAAATGCTCTTTTCGAGAGCGACGACGGCTTTGTACGGCG
AGAAAGCGAACGATACATCGAGGAGGCGAGGGACGGCATGCCTTCCGAAG
GCGGGTGGAGCGGGGATCGGGTGTCGCGACAGTGGGTGGCGAGCTACCGA
CTTTCGGTCTTCGAAACCCGTAGGCAGGCCCAGCGGTTTTTCTCTTGGGG
TATCCCTGACGAGGGGAATGAAACAACCTTGAACCACTTCTACGCCATTT
GTCTTTGCCTGCTTTGCTGGAACGCCCTTGCTAATAGAGCTCTGGACTGC
ATCCTGGAGCCTAGAAAGCGGGTCCTAGAGGTCGGAAGCGGCCTGGGCTA
CTGGGCCTACCTCTTGAAGCTGCGAAGCGGAGATGACTCTCGCGTGCGCT
GCTTCGACCCGTTCGCCCCACCAGCCCGTCAACGTACCGAAGTCTCCACC
ACCGAGGACGAAAGTGGTTATTCGGTCGAAGAAGCACCACCCCGCTCGAT
CGACAACGCTCCCTCACCGGAACCAATCAGTATGCCAGAAGAAGAGGTCG
ACGACTGGTTTGGGGAGGGGCGAGAACCCTTCTCCCCGGCGGAGCGCGGG
TCGTTCGACCGAATTGCCCGCGAGGACGGGTTCCGGAACTGGTCGCTGCT
CATTTGCTGGCCGAGCGACGGGCAGTGGCCGGCCGGCTGCCTGCAGGAGT
TTGCAGGGAACGACTTCTTTTACGTGGGGGAGGGAGAGGGTGGCGCGACA
CGCATGCCTTGGCGGGTGTTGAGGGAGGAGTGGGAGATCGTGAGACGCGT
GGAGATACCCACGTGGCCAGGATTCCGGGACGCGCTCTGGTGGTACAAAA
GGAAAGAACCGGACGCCTTGTCGCGGGACCGATAG back to top
|