Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft2112_3 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 219 |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2112_3a-0001 ID=EsuBft2112_3a-0001|Name=EsuBft2112_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2190bp|location=Sequence derived from alignment at Scaffold_344:292327..295724- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GAGAGTGGCATGAGACCTTGCTGTCAACTGCGCCTGAACGCCAGCAACAT
ATACTGCAGCGGGGAAGCACGGGCGGCTGGCTATTTTTTTATGGGGCTTA
CGGCCGGCCTGCGTGTGGAGGTTTGGACGGGTTTGGTGTACAAGAGCCCG
AANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNGCCTGACCCCATCAGTGCCGACCCAACTACACCACC
ACGCGCATGCCTCGCGGCGGATATGCGCAGCAGCAAGAAGGTTTCGGTCA
TCCCTTGAGGGTATTAATTACATCGTGTGCAAATTGAACTGTCAGTACCG
TAAATGATTGTAGAGACGACACTTAATACAGAATCCAGATTCATGAGCTT
GGCAATCAACGACACCCCTCTCCGCGAACAAACACTGCTGTGCAACAAAT
AAGCGCAAAAAAAAAGTTTTTCGACTTTTTTCTTGGAACAGAAAAAAAGC
GGGAGAGGTCCCGTTCACCCCCACCAGTATCAAGCACTGTGCAGAAAATA
AGCGCAAAATAAACGCGTTTTCGACAGTTTTCATGAACAGAGATCCTGTA
TCAGCCACACCAGAGACCACACATCCATCGGCGAGGAAGGAGGTGTGTGA
AGCCGTGGACAGAGAGCGTATTTTACACAAACATCCCTGTCTGTTTTAAG
AGCTGAATGCATTTTTTGATAAAATGCCCCAGGGGAAACCCTCCGCGGAA
CGTTTGTTGCAGTCTTCCAGAACTCTAGTTGGTCGCGCAGCTGCCATTTA
GCACGTGGCGCGCAGCCAACGAAATTTCGCAACAGGGCGCATGCTGCAAC
CCCAGAGAATTTTCGCGCGTGGCGTGACAAGCTCGTTTGGACGCCTTCCC
ACCTTTATTTTATTTTCCGCCGAAGTCGTGTTGCGTTCTTTATTTTTTAT
TTGCATTTTTGCTGCCCAAGTGCTTTGCGATGTGGTTAATTAAAGTAGCA
CTACGTTTGCAGCACATGCTTTATACTCTTGTGCTGAGTTGGCGAAGAAG
TTGGAAGCACTTTGTAGCATCGTTCAAGCTAGATGGTCTGCGGCATAATT
TTGATGCTGCACAACACAAAAGCAGCTGCGGACGCAACAAGTTGTCCGCG
AGTTATGCGCAGAGGGTGCCATCCCGCTGGCAAACCAATGATCTTTTCAG
AACTTCAGTTGCTATACACACTGGTGCAGCAGCATGTGACTACCGTGGCG
CAACAGTTTCGAGCAGCGGGCATAGAGTCTTCGTGACGAACCTAGTTATT
TTTCTCGTCATGATGTACCCAAACGTATGCGCGGGCAGACATGTCGTGAC
GTTGTCCCCTAATTACATATGATTTTTGTCACCTTTCTTATATTCGTTCG
CGTGTGGTGCCACTCTGCCGCGTGTTTTCGTTAAGTCTCAGCAAGAGGTC
TGCGTCCGGGAGGATAAGCGGCGGCGGGAATGCAACGCGCTCCCGCCAAT
GGAGGCCAAGTGGGCCTGGCAGCCGCCGTGGACCCCACCACAGCCGAGCG
TCTTGAGCATGTTGGTAGGTTGCTCGCCAAAAGAAGCCTT back to topprotein sequence of EsuBft2112_3a-0001 >EsuBft2112_3 ID=EsuBft2112_3|Name=EsuBft2112_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=51bp
MGLTAGLRVEVWTGLVYKSPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
X back to topmRNA from alignment at Scaffold_344:292327..295724- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2112_3a-0001 ID=EsuBft2112_3a-0001|Name=EsuBft2112_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=3398bp|location=Sequence derived from alignment at Scaffold_344:292327..295724- (Ectocarpus subulatus male Bft15b)
GAGAGTGGCATGAGACCTTGCTGTCAACTGCGCCTGAACGCCAGCAACAT
ATACTGCAGCGGGGAAGCACGGGCGGCTGGCTATTTTTTTATGGGGCTTA
CGGCCGGCCTGCGTGTGGAGGTTTGGACGGGTTTGGTGTACATGCGCGTC
TGACGACTAATTGTTTGTTGTTGTTGTTGACTTCACATTAAACCGTATGC
CAGTTGCTAAATGCCAAAATCTAGCAAAGACTCTCGGCCCGTGGTCACGA
AAGTGCTAGAGCCATCTGAGGATCTAAAGAACACGCACACGTAGCAAGAA
AAAGGTGTACAAGAGCCCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNGCCTGACCCCATCAGTG
CCGACCCAACTACACCACCACGCGCATGCCTCGCGGCGGATATGCGCAGC
AGCAAGAAGGTTTCGGTCATCCCTTGAGGGTGAGTCTAGCCCTGCTCGCC
AGAAAGACCCCCCCCTTCGCTACAACCCATGTCTAAGCAAAAGCTTGTCG
AGGAGCGAGGGGAAGAAGGGAGACTAAGAGGGCGCTGAATATATTGTTGG
CTTGACACATTTTTTGGGGCATCTTTCGGTGTTTTTCAAGGTTGTAATAC
AAGGGTGTCGCTGTTTTTTTGTGGTGCTTTAACACATGAATTAGGGCCTC
GCTCGGGGTTTTTAATGGGGTTTTAATACGGAAGAGTACGGACAGCCTGA
TACTGGAAGAAGAGCAGCGGGGTACTTGGCAGGTATTAATTACATCGTGT
GCAAATTGAACTGTCAGTACCGTAAATGATTGTAGAGACGACACTTAATA
CAGAATCCAGATTCATGAGCTTGGCAATCAACGACACCCCTCTCCGCGAA
CAAACACTGCTGTGCAACAAATAAGCGCAAAAAAAAAGTTTTTCGACTTT
TTTCTTGGAACAGAAAAAAAGCGGGAGAGGTCCCGTTCACCCCCACCAGT
ATCAAGCACTGTGCAGAAAATAAGCGCAAAATAAACGCGTTTTCGACAGT
TTTCATGAACAGAGATCCTGTATCAGCCACACCAGAGACCACACATCCAT
CGGCGAGGAAGGAGGTGTGTGAAGCCGTGGACAGAGAGCGTATTTTACAC
AAACATCCCTGTCTGTTTTAAGAGCTGAATGCATTTTTTGATAAAATGCC
CCAGGGTACGTGCCCCCACCCGAATATATGTACGGGGCCACCGACCCACA
ATGGCACACATGGCAGGCAATCAACAGCAGTAGCTAGTGTGCGCATTGTA
CTCAAGAACGACGGGTTCCAGCTCCACCGCGCGTCCACCGTGCCTGCAAA
TCGAACGTGCTATCAAGTGAGGGGGTAGAAAGTGCAGGGAAACCCTCCGC
GGAACGTTTGTTGCAGTCTTCCAGAACTCTAGTTGGTCGCGCAGCTGCCA
TTTAGCACGTGGCGCGCAGCCAACGAAATTTCGCAACAGGGCGCATGCTG
CAACCCCAGAGAATTTTCGCGCGTGGCGTGACAAGCTCGTTTGGACGCCT
TCCCACCTTTATTTTATTTTCCGCCGAAGTCGTGTTGCGTTCTTTATTTT
TTATTTGCATTTTTGCTGCCCAAGTGCTTTGCGATGTGGTTAATTAAAGT
AGCACTACGTTTGCAGCACATGCTTTATACTCTTGTGCTGAGTTGGCGAA
GAAGTTGGAAGCACTTTGTAGCATCGTTCAAGCTAGATGGTCTGCGGCAT
AATTTTGATGCTGCACAACACAAAAGCAGCTGCGGACGCAACAAGTTGTC
CGCGAGTTATGCGCAGAGGGTGCCATCCCGCTGGCAAACCAATGATCTTT
TCAGAACTTCAGTTGCTATACACACTGGTGCAGCAGCATGTGACTACCGT
GGCGCAACAGTTTCGAGCAGCGGGCATAGAGTCTTCGTGACGAACCTAGT
TATTTTTCTCGTCATGATGTACCCAAACGTATGCGCGGGCAGACATGTCG
TGACGTTGTCCCCTAATTACATATGATTTTTGTCACCTTTCTTATATTCG
TTCGCGTGTGGTGCCACTCTGCCGCGTGTTTTCGTTAAGTCTCAGCAAGA
GGTCTGCGTCCGGGAGGATAAGCGGCGGCGGGAATGCAACGCGCTCCCGC
CAATGGAGGCCAAGTGGGCCTGGCAGCCGCCGTGGACCCCACCACAGCCG
AGGTACGTATTATTTTCACACGAAAGACTTCGCGTTTAGAGGTTTGATGA
CTATTTTTGTAGTCCAAAGTACCGGTGGGGTCCTACCCTTCTGTGCGACC
ACGGATCAGAGCTCTGGCAAGATGCCCCTGCGAGCGATGGTTAAATGTGA
TACCTCCGTCGCCCCGGTGGTTCAGTTGGTGACCCCGCAGCCTCTGAAGT
TTGGGCCGTGAGTTCGAACACTTACCCTGGGTATGTTTTCTCACATCATG
CCCGAACAAGTGGAGAACGCTTTATTCGTAGGTAAAAAAAATCCGACTTC
ACGGTCGGCGAGGGAAGTGATGGCTGAGCCCTTCTCGCGATAAAAAATGA
AGGCAAGAACCGCAGAGAGAAGGTGGAGATTGTGTGATGTGTGACCTTCC
TCTTGTGTGACCCAGGCTGATACGTCAAACGTATGCACCGAAAGGTGTGT
AGACTGACGCCAGAATAGAAGGGAGTAACAACACACACACGCACAACTCA
ATCCTCGAACTCAATTCTGAGTTCCATCCCTCCCTCCCTCCCTCTCCCGT
GCACAGCGTCTTGAGCATGTTGGTAGGTTGCTCGCCAAAAGAAGCCTT back to topCoding sequence (CDS) from alignment at Scaffold_344:292327..295724- >EsuBft2112_3a-0001 ID=EsuBft2112_3a-0001|Name=EsuBft2112_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=153bp|location=Sequence derived from alignment at Scaffold_344:292327..295724- (Ectocarpus subulatus male Bft15b)
ATGGGGCTTACGGCCGGCCTGCGTGTGGAGGTTTGGACGGGTTTGGTGTA
CAAGAGCCCGAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNN back to top
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