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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G722 |
| ProteomeId | EsuBft2112_4 |
| Protein domains | IPR002182 |
| Protein domains | IPR027417 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 4 |
| Max annot lvl | 2759|Eukaryota |
| Length | 132 |
| Hectar predicted targeting category | other localisation |
| Evalue | 8.2e-152 |
| EggNOG OGs | COG0457@1|root,KOG4658@1|root,KOG1840@2759|Eukaryota,KOG4658@2759|Eukaryota |
| Date last modified | 2016-06-15 |
| Date creation | 2016-06-15 |
| KEGG ko | ko:K10407 |
| KEGG Pathway | ko05132,map05132 |
| Description | ADP binding |
| COG category | S |
| BRITE | ko00000,ko00001,ko03019,ko04812 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0043531 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft2112_4a-0001 ID=EsuBft2112_4a-0001|Name=EsuBft2112_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1321bp|location=Sequence derived from alignment at Scaffold_344:290438..292295- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGGAGTTGGAGGCTTGCCCCAGCCCCGTCCAGGAGGCTCTGCCATG
GATGGCGACATCTGCAGTTGGGGTCCTCGACATTGCGAGCGTTGGGCCAT
TAGAGCCTGTGTGTCAGGCATTCAAGGCGCTGATCGAGGCCGCCGAAGGT
GCAGTCGAATCCCAGGAGAAGCTACAGAGCTTGGTGTCCCGGTGCAGATT
CCTCACAACCGTCTTGATTCGACACCGTCGAGCGGTTGATCCCCTCGCTC
AGGTGCAGACGCCCATCGGGGACTTCGTCGTCACGACCAACAAGCTGGCA
GCATTCGCAGAAAGTGGTCCAGGGGTGGCAAGTGCAGGGCGTTTTTTTTG
CCATCGCACCGACCTGAGCACCCTCACCGACTTTGAGGAGGGTCTCCGCA
GGATCGGCGCCGACATCAACTCGGAAGACGGGCTGGAGTATCACCAGCAG
TCAATCGGACTGGGTCGCGCGTTGCTCCCACCAAGCTTGCCGGACATGGC
CGCAGTCCCCGCAGGAGCGCTTGCGTTGCCCCACAGCTACGTGGAGCGCG
CCGCGGTACAAGAAGTTGCTGACGGCCTCACCAACCCGGAGGAGCCGCGT
GCCCCCTACTCTGCTGTCGGGATGGGTGGAGGGGGGAAGAGCGTGCTTGC
CTCTGCTGTCGTGCGCAAGTCGAGCGTGACTCAACACTTCCGTGGGGGGA
GATGGGCGCTGGGGCATCCACGGGCCTCCCCACGCCTCGTGGTGCTGGAT
GACGTGTGGGAGCCCGAGGTTGTGGACGCGCTTCTTCCTCTGGGATTGAA
GGTGCTTGTGACCACGATTGATCGGTCGGTTCTTGGCGTGTCGTCGGGAT
GCGTGGAGGTGGGAGACATGACGGAGGGAGAGGCGCTGGAGCTGCTGCGG
AAGACGAGTAGGACTGTGGGTCGTTGCGCTCTGTGGACGTCTACCGTTGG
TGCTCGCGATCGCGGGTTCCATGCCCGTCGTGAAAGGAAGGGCTTGACCG
CCGGCGCATGGGGAAAGCTGATCGAATTAGAGGATGTTGCTACGAAGATG
GAGGCTTCCGACGAGGACTCGGATAGTCTTAATGTCGTCCTCGAGACCAG
CTTCAATGCCTTGACGTTAACGAAGAAGAGGGAGTTTAAGAAGTCGGCTG
TGTTGGCGCCGGGTGCCGTTGTGTCGACCGAGATGCTGCTAAACCTGTGG
GAGACAAAGGACACGGGGGGTACGCGAGAGGAAGCTGAGGGTCTGGTAAG
CAAGTGCCTACCTGCACGATGTGGGTGGTGGTGGGTACCGTGTTCATGAC
CTCGTCCTGGACTTTGTGAAA back to topprotein sequence of EsuBft2112_4a-0001 >EsuBft2112_4 ID=EsuBft2112_4|Name=EsuBft2112_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=432bp
MEELEACPSPVQEALPWMATSAVGVLDIASVGPLEPVCQAFKALIEAAEG
AVESQEKLQSLVSRCRFLTTVLIRHRRAVDPLAQVQTPIGDFVVTTNKLA
AFAESGPGVASAGRFFCHRTDLSTLTDFEEGLRRIGADINSEDGLEYHQQ
SIGLGRALLPPSLPDMAAVPAGALALPHSYVERAAVQEVADGLTNPEEPR
APYSAVGMGGGGKSVLASAVVRKSSVTQHFRGGRWALGHPRASPRLVVLD
DVWEPEVVDALLPLGLKVLVTTIDRSVLGVSSGCVEVGDMTEGEALELLR
KTSRTVGRCALWTSTVGARDRGFHARRERKGLTAGAWGKLIELEDVATKM
EASDEDSDSLNVVLETSFNALTLTKKREFKKSAVLAPGAVVSTEMLLNLW
ETKDTGGTREEAEGLVSKCLPARCGWWWVPCS back to topmRNA from alignment at Scaffold_344:290438..292295- Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft2112_4a-0001 ID=EsuBft2112_4a-0001|Name=EsuBft2112_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1858bp|location=Sequence derived from alignment at Scaffold_344:290438..292295- (Ectocarpus subulatus male Bft15b)
ATGGAGGAGTTGGAGGCTTGCCCCAGCCCCGTCCAGGAGGCTCTGCCATG
GATGGCGACATCTGCAGTTGGGGTCCTCGACATTGCGAGCGTTGGGCCAT
TAGAGCCTGTGTGTCAGGCATTCAAGGCGCTGATCGAGGCCGCCGAAGGT
GCAGTCGAATCCCAGGAGAAGCTACAGAGCTTGGTGTCCCGGTGCAGATT
CCTCACAACCGTCTTGATTCGACACCGTCGAGCGGTTGATCCCCTCGCTC
AGGTGCAGACGCCCATCGGGGACTTCGTCGTCACGACCAACAAGCTGGCA
GCATTCGCAGAAAGTGGTCCAGGGGTGGCAAGTGCAGGGCGTTTTTTTTG
CCATCGCACCGACCTGAGCACCCTCACCGACTTTGAGGAGGGTCTCCGCA
GGATCGGCGCCGACATCAACTCGGAAGACGGGCTGGAGTATCACCAGCAG
TCAATCGGACTGGGTCGCGCGTTGCTCCCACCAAGCTTGCCGGACATGGC
CGCAGTCCCCGCAGGAGCGCTTGCGTTGCCCCACAGCTACGTGGAGCGCG
CCGCGGTACAAGAAGTTGCTGACGGCCTCACCAACCCGGAGGAGCCGCGT
GCCCCCTACTCTGCTGTCGGGATGGGTGGAGGGGGGAAGAGCGTGCTTGC
CTCTGCTGTCGTGCGCAAGTCGAGCGTGACTCAACACTTCCGTGGGGGTA
TTTTCTGGATGAGAGTGGGGAGGGGCGCAACGAATAGCATCCTGCCCCTC
CTACAGGGTCTGGCCAGGGAGATGGGCGCTGGGGCATCCACGGGCCTCCC
CACGCCTCGTGGTGCTGGATGACGTGTGGGAGCCCGAGGTTGTGGACGCG
CTTCTTCCTCTGGGATTGAAGGTGCTTGTGACCACGATTGATCGGTCGGT
TCTTGGCGTGTCGTCGGGATGCGTGGAGGTGGGAGACATGACGGAGGGAG
AGGCGCTGGAGCTGCTGCGGAAGACGAGTAGGACTGTGGGTCAGCCTGGG
GACGCTGTCCGGACGTAGATGACCAAGGTGATGGATGCGCGTTGAATCTT
ACGTCGAGGTAGGGTGTCGTGGTATTTTTTTTAGCTGGTGTTATGACTCC
TTCTCATTTTGAGCGTAACATCGTTGGGGGCTTTGGTGCTGGGTGGACCC
ACATTGTCACACAGCATGGAGTTGGAGGATGTGAGGAATGTTGACAATAG
TATTGGCCCTCCCGAGAACCGGTACCTACGTCGTCACATGGAGTACAGTT
GTGAAGTACTATGAAGTATAATCGTCGAGCTCGATTCAACCCCGATCCAG
GTCGTTGCGCTCTGTGGACGTCTACCGTTGGTGCTCGCGATCGCGGGTTC
CATGCCCGTCGTGAAAGGAAGGGCTTGACCGCCGGCGCATGGGGAAAGCT
GATCGAATTAGAGGATGTTGCTACGAAGATGGAGGCTTCCGACGAGGACT
CGGATAGTCTTAATGTCGTCCTCGAGACCAGCTTCAATGCCTTGACGTTA
ACGAAGAAGAGGGAGTTTAAGAAGTCGGCTGTGTTGGCGCCGGGTGCCGT
TGTGTCGACCGAGATGCTGCTAAACCTGTGGGAGACAAAGGTGCGTTGTG
GGTTCCCTTGTGCCATGTGGTTGAACGTCTGGAACTCGTGTTTTGTGAGT
TGCTTTAAAGATTGCACGTGCGCTTTTTTCACACGCTGTCTCGTCTGTGC
TGCGTATTGACCTCGGTGCATACCTTCCCCGGTGTTCAATGTGCAGGACA
CGGGGGGTACGCGAGAGGAAGCTGAGGGTCTGGTAAGCAAGTGCCTACCT
GCACGATGTGGGTGGTGGTGGGTACCGTGTTCATGACCTCGTCCTGGACT
TTGTGAAA back to topCoding sequence (CDS) from alignment at Scaffold_344:290438..292295- >EsuBft2112_4a-0001 ID=EsuBft2112_4a-0001|Name=EsuBft2112_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1299bp|location=Sequence derived from alignment at Scaffold_344:290438..292295- (Ectocarpus subulatus male Bft15b)
ATGGAGGAGTTGGAGGCTTGCCCCAGCCCCGTCCAGGAGGCTCTGCCATG
GATGGCGACATCTGCAGTTGGGGTCCTCGACATTGCGAGCGTTGGGCCAT
TAGAGCCTGTGTGTCAGGCATTCAAGGCGCTGATCGAGGCCGCCGAAGGT
GCAGTCGAATCCCAGGAGAAGCTACAGAGCTTGGTGTCCCGGTGCAGATT
CCTCACAACCGTCTTGATTCGACACCGTCGAGCGGTTGATCCCCTCGCTC
AGGTGCAGACGCCCATCGGGGACTTCGTCGTCACGACCAACAAGCTGGCA
GCATTCGCAGAAAGTGGTCCAGGGGTGGCAAGTGCAGGGCGTTTTTTTTG
CCATCGCACCGACCTGAGCACCCTCACCGACTTTGAGGAGGGTCTCCGCA
GGATCGGCGCCGACATCAACTCGGAAGACGGGCTGGAGTATCACCAGCAG
TCAATCGGACTGGGTCGCGCGTTGCTCCCACCAAGCTTGCCGGACATGGC
CGCAGTCCCCGCAGGAGCGCTTGCGTTGCCCCACAGCTACGTGGAGCGCG
CCGCGGTACAAGAAGTTGCTGACGGCCTCACCAACCCGGAGGAGCCGCGT
GCCCCCTACTCTGCTGTCGGGATGGGTGGAGGGGGGAAGAGCGTGCTTGC
CTCTGCTGTCGTGCGCAAGTCGAGCGTGACTCAACACTTCCGTGGGGGGA
GATGGGCGCTGGGGCATCCACGGGCCTCCCCACGCCTCGTGGTGCTGGAT
GACGTGTGGGAGCCCGAGGTTGTGGACGCGCTTCTTCCTCTGGGATTGAA
GGTGCTTGTGACCACGATTGATCGGTCGGTTCTTGGCGTGTCGTCGGGAT
GCGTGGAGGTGGGAGACATGACGGAGGGAGAGGCGCTGGAGCTGCTGCGG
AAGACGAGTAGGACTGTGGGTCGTTGCGCTCTGTGGACGTCTACCGTTGG
TGCTCGCGATCGCGGGTTCCATGCCCGTCGTGAAAGGAAGGGCTTGACCG
CCGGCGCATGGGGAAAGCTGATCGAATTAGAGGATGTTGCTACGAAGATG
GAGGCTTCCGACGAGGACTCGGATAGTCTTAATGTCGTCCTCGAGACCAG
CTTCAATGCCTTGACGTTAACGAAGAAGAGGGAGTTTAAGAAGTCGGCTG
TGTTGGCGCCGGGTGCCGTTGTGTCGACCGAGATGCTGCTAAACCTGTGG
GAGACAAAGGACACGGGGGGTACGCGAGAGGAAGCTGAGGGTCTGGTAAG
CAAGTGCCTACCTGCACGATGTGGGTGGTGGTGGGTACCGTGTTCATGA back to top
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