EsuBft2112_6a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

The following sequences are available for this feature:

mRNA - spliced transcript sequence
protein sequence
mRNA from alignment at Scaffold_344:283457..284758-
coding sequence from alignment at Scaffold_344:283457..284758-

spliced messenger RNA

>EsuBft2112_6a-0001 ID=EsuBft2112_6a-0001|Name=EsuBft2112_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1262bp|location=Sequence derived from alignment at Scaffold_344:283457..284758- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
GTGGCGTAGGCCGCAAACACTCTAGAGTTTTGCCCCTCGAGGGAAGCCAC
ATCGGGATGAGCTCTGCTGGAGACGAAGAGCGCGCTGCTGCGAGCGGAGA
ACAGATCCGCCCGCCGGTGCAGGAGGGCCGCGACGCGGAGCTTGCAAGAT
TGCTACGGCAGATTTCGCATTTGGCGGCCCTGGTGGAGGAGTCGGTGAAG
AAGCAGGAGCCTGGTAGCGTCGTGGCGGATGCAGCCAGTAGTGGCGGCTG
GGTTGCCGCCACCGGAGGCCAAGATCAGCCCCTGCTGCCGCACGGCGGAG
GCGGGGGATTTCTCCAGCAGCAAGCGTGAGAAAGTGGGCAAGGACCACGG
CCGCTGCTGGAAGGCGGCTGGGCCAGCAGATCGGGAGCGAACCCTGTTGG
ACCAGCCGGAGTGGGCCCGGGCATAGGACCGGACTACGGGGAAGCGAGGG
GGTTAAACCCCCCAGGTGAGATACCCGTGATTCGAGGAAATGGAGAATAC
CTCGACGGCTACAGCAGTAGCCACATGAAGAGGGTAACGGTGAATGCTCC
GCTCCTAGACGGAAAAAGCCGTAGCCACGGATTTGACTCGTGGCGAAAAT
CATTCATCCAAGCTGCGAAGACCANTGTCAATGCTCCGCTTCTAGACGGT
AAAAAGCCGTAGCCGCGGATTTGACTCGTGGCGAAAATCTTNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNGGGCCAGCGTAGGGCGGAGCATG
CTCTCCTCGCGAGCGACGGTAGGGGCAGGGGAGGAGCGCCAGGCCGCGGC
AACAGCGGCCGC

protein sequence of EsuBft2112_6a-0001

>EsuBft2112_6 ID=EsuBft2112_6|Name=EsuBft2112_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=90bp
MSSAGDEERAAASGEQIRPPVQEGRDAELARLLRQISHLAALVEESVKKQ
EPGSVVADAASSGGWVAATGGQDQPLLPHGGGGGFLQQQA

mRNA from alignment at Scaffold_344:283457..284758-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

>EsuBft2112_6a-0001 ID=EsuBft2112_6a-0001|Name=EsuBft2112_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1302bp|location=Sequence derived from alignment at Scaffold_344:283457..284758- (Ectocarpus subulatus male Bft15b)
GTGGCGTAGGCCGCAAACACTCTAGAGTTTTGCCCCTCGAGGGAAGCCAC
ATCGGGATGAGCTCTGCTGGAGACGAAGAGCGCGCTGCTGCGAGCGGAGA
ACAGATCCGCCCGCCGGTGCAGGAGGGCCGCGACGCGGAGCTTGCAAGAT
TGCTACGGCAGATTTCGCATTTGGCGGCCCTGGTGGAGGAGTCGGTGAAG
AAGCAGGAGCCTGGTAGCGTCGTGGCGGATGCAGCCAGTAGTGGCGGCTG
GGTTGCCGCCACCGGAGGCCAAGATCAGCCCCTGCTGCCGCACGGCGGAG
GCGGGGGATTTCTCCAGCAGCAAGCGTGAGAAAGTGGGCAAGGACCACGG
CCGCTGCTGGAAGGCGGCTGGGCCAGCAGATCGGGAGCGAACCCTGTTGG
ACCAGCCGGAGTGGGCCCGGGCATAGGACCGGACTACGGGGAAGCGAGGG
GGTTAAACCCCCCAGGTGAGATACCCGTGATTCGAGGAAATGGAGAATAC
CTCGACGGCTACAGCAGTAGCCACATGAAGAGGGTAACGGTGAATGCTCC
GCTCCTAGACGGAAAAAGCCGTAGCCACGGATTTGACTCGTGGCGAAAAT
CATTCATCCAAGCTGCGAAGACCANTGTCAATGCTCCGCTTCTAGACGGT
AAAAAGCCGTAGCCGCGGATTTGACTCGTGGCGAAAATCGTTCATCCAAG
CTGCGAAGACCATCGACTTGGACGGGCAGTTNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNGGGCCAGCGTAGGGCGGAGCATGCTCTCCTCGC
GAGCGACGGTAGGGGCAGGGGAGGAGCGCCAGGCCGCGGCAACAGCGGCC
GC

Coding sequence (CDS) from alignment at Scaffold_344:283457..284758-

>EsuBft2112_6a-0001 ID=EsuBft2112_6a-0001|Name=EsuBft2112_6a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=273bp|location=Sequence derived from alignment at Scaffold_344:283457..284758- (Ectocarpus subulatus male Bft15b)
ATGAGCTCTGCTGGAGACGAAGAGCGCGCTGCTGCGAGCGGAGAACAGAT
CCGCCCGCCGGTGCAGGAGGGCCGCGACGCGGAGCTTGCAAGATTGCTAC
GGCAGATTTCGCATTTGGCGGCCCTGGTGGAGGAGTCGGTGAAGAAGCAG
GAGCCTGGTAGCGTCGTGGCGGATGCAGCCAGTAGTGGCGGCTGGGTTGC
CGCCACCGGAGGCCAAGATCAGCCCCTGCTGCCGCACGGCGGAGGCGGGG
GATTTCTCCAGCAGCAAGCGTGA