Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft103_20 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 103 |
| Hectar predicted targeting category | other localisation |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft103_20a-0001 ID=EsuBft103_20a-0001|Name=EsuBft103_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1038bp|location=Sequence derived from alignment at Scaffold_344:189655..191855- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTGAACGAAAATTTGAGGCTCGGTGGGGTGCGCGCTGGCAACCCCAAATC
ACACGACGGCAGCACTGCACCCGGAGTGCCCAAGATGTGGGAGGCGCTTC
AATCGCTCGACTATGACGATCCAGCGAAAAAATGAGCGGAGGGAAGAATG
GACGTTCGAGGAAGGGTCGCGGAACGGAGAGCTGGACTAGGTCCGCGCCC
GCGAGAAGGTTGAAGGCTGGTGGACGGATATGCGTGCGGAGTTCAGGATC
GCCAACAAGAACAAAGAGAAGAGTGGGAACAACGCTGAACACCACTGGTC
CTTCTGTAACCAGAGGCTGTACGTCCTGCTCATGATGGACTGGTACGAGC
TGAGGGGAGGCGACAGCGCCAACGAGCACTGCGCAAGGTACTTCAGCGTG
AGGCTCAGCGAGGAGGATGGGGAAGCTTTCAACACTCTGTCCATGGAAGA
CGAGCAGTCGTCCAGCGATTCGGATGAACCGCCCGCTCCGAAGGGGAAGC
CGCGAGAGCGGAAGGCGAGGGAGAAGGGGAAGGTAAAACCGGAAGAAACC
TTGGTCCAACTTGTGGACGCATTCAAGACCACACCGAACAGCGTGGCAGC
GGCGATGTACAAGATTGCGGACAACGACGCCGGGAATCCCGTGGATATGT
TGATTGCTGCCTGCGATCGCGTTGATGACTTGGGAGAGAAGTTGGGAAAA
TGAGAAAGCAGCAGAAGCGCCCAAAACAAAAATTGAAAGGATCACTCAAA
ACCTCGCAGTTTTAAAGCGCGGGAGGCGTACGAAAAAATCTACAAAAAGA
CCAGGCCTGCTGCAGAGAAAGCGGCGGAGGAAGGAAGAAGAAGAGGAAGA
GAGTGAGGTTTCGTAGCGAGTTCTCGTGAAGGCCCTCCGGACAAACCAAA
CCCGACCTCTTCCAACGACGCATGAAGAGGATGCCTTGTCGTTTTGGGTT
TGATTCACACGGCATAGGTTGGGTACATGCATTGTTTTTAGTATGGCTAG
TTTTTTTTCCGTTGTGTGCAGCACGAAGGTAGGGCACT back to topprotein sequence of EsuBft103_20a-0001 >EsuBft103_20 ID=EsuBft103_20|Name=EsuBft103_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=157bp
MRAEFRIANKNKEKSGNNAEHHWSFCNQRLYVLLMMDWYELRGGDSANEH
CARYFSVRLSEEDGEAFNTLSMEDEQSSSDSDEPPAPKGKPRERKAREKG
KVKPEETLVQLVDAFKTTPNSVAAAMYKIADNDAGNPVDMLIAACDRVDD
LGEKLGK back to topmRNA from alignment at Scaffold_344:189655..191855- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft103_20a-0001 ID=EsuBft103_20a-0001|Name=EsuBft103_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2201bp|location=Sequence derived from alignment at Scaffold_344:189655..191855- (Ectocarpus subulatus male Bft15b)
GTGAACGAAAATTTGAGGCTCGGTGGGGTGCGCGCTGGCAACCCCAAATC
ACACGACGGCAGCACTGCACCCGGAGTGCCCAAGATGTGGGAGGCGCTTC
AATCGCTCGACTATGACGATCCAGCGAAAAAATGAGTTTTGTTATTTCGT
TAGTATGTCGCACATTTGAGACATACATGTTGTGCTGCTGGTTCGCTTCT
ATTTACATGTAAAGGGCAGGTGCCCGGGGAGTTGCGGCTGTTTCTTTCTC
CTTTCCCCCGCGGAACGCAGCTATTGTTTGACTTGCTTTGAAAACGGGCC
TCGCAGGTTAACAGTAGGAATGCCAGCTGCCAGTTCTTAATTTTTGCCAC
TTATTTTATCAATTACGGGGGCGCTGGTTTCTTGGCTTATGGTGCAGTGC
CTCATGTGAGTTCGTCGTTCAAACGTCTCGCTGTTGTCAGGCGGAGGGAA
GAATGGACGTTCGAGGAAGGGTCGCGGAACGGAGAGCTGGACTAGGTCCG
CGCCCGCGAGAAGGTTGAAGGCTGGTGGACGGATATGCGTGCGGAGTTCA
GGGTGAGTTTCGGACAACGATCCACGGCGGGTGGATTTGGTATTTTCCGA
TTTCCTGTAGAACTACTTGCGCAAGATGCCCACCTCCGTGCTTCGACAGG
CCTTTTGTTGGTAGCCGCCTTCGTTGGGGACGCATTGGATCTTTGCTGCG
GTGGAAGTTGGGTTCAAGAAACCCGACCGTCCAGACGACCGTCTACCCTC
CTGTGTCCCATCCCTTGGTCTTTTTTTTTTTTCGGGTGCGGGGGGCGGGT
TCAGCACTCCTGCATGCCGGGTGCTGTTGTTACAGAACGAAAGCCCACCC
CCCGTCTTGTTTTTCTTTTCTTTGTCGGCAGTAGTGGTAGTTGGTCGACA
AACTGCCCCCGTCCAGACGTCCGTCTGCCCTCCTCTGCTCCGTCCTCTGG
TCGTTTTTTTTTGGGAGGGGGGGGGGGGAACGGGTTCAACGGGCATATGT
GCCGGGTGCTGTTTCAGTCCAGTAGCACACGACCCCTCCACTTATTTTTT
TTTGTTTTTTCGGTCTGACGCACGCGGCGGTGCAGTACTTAATCGAAACA
TTCGCCCCGCCCAGACGACAGTCTCCCATAGTGTGCTCCTTCCTGGTTTG
TTTTGACGTCGGGTGCGGGCACACGTGTCGCGTGCTTGTTTCATCGGTAA
CTATCTGACATAGTCCCGTACGTTGTGTGCTGGGTGAACGTTGTCAATGT
AGGCGTCGCTCATCGCTGGTGGTGTCTAGAACGCGTTTGATCTCCTTTGG
GGAAAGTTGGGACGGTCAGAAATACGTTTTCCCGAACCCCAACTCCTTAC
ATCTATTGTAACCCCTCTTTTCATGCCAACACATGTAATTGTGCTATGCA
TGTTTTCCAGATCGCCAACAAGAACAAAGAGAAGAGTGGGAACAACGCTG
AACACCACTGGTCCTTCTGTAACCAGAGGCTGTACGTCCTGCTCATGATG
GACTGGTACGAGCTGAGGGGAGGCGACAGCGCCAACGAGCACTGCGCAAG
GTACTTCAGCGTGAGGCTCAGCGAGGAGGATGGGGAAGCTTTCAACACTC
TGTCCATGGAAGACGAGCAGTCGTCCAGCGATTCGGATGAACCGCCCGCT
CCGAAGGGGAAGCCGCGAGAGCGGAAGGCGAGGGAGAAGGGGAAGGTAAA
ACCGGAAGAAACCTTGGTCCAACTTGTGGACGCATTCAAGACCACACCGA
ACAGCGTGGCAGCGGCGATGTACAAGATTGCGGACAACGACGCCGGGAAT
CCCGTGGATATGTTGATTGCTGCCTGCGATCGCGTTGATGACTTGGGAGA
GAAGTTGGGAAAATGAGAAAGCAGCAGAAGCGCCCAAAACAAAAATTGAA
AGGATCACTCAAAACCTCGCAGTTTTAAAGCGCGGGAGGCGTACGAAAAA
ATCTACAAAAAGACCAGGCCTGCTGCAGAGAAAGCGGCGGAGGAAGGAAG
AAGAAGAGGAAGAGAGTGAGGTTTCGTAGCGAGTTCTCGTGAAGGCCCTC
CGGACAAACCAAACCCGACCTCTTCCAACGACGCATGAAGAGGATGCCTT
GTCGTTTTGGGTTTGATTCACACGGCATAGGTTGGGTACATGCATTGTTT
TTAGTATGGCTAGTTTTTTTTCCGTTGTGTGCAGCACGAAGGTAGGGCAC
T back to topCoding sequence (CDS) from alignment at Scaffold_344:189655..191855- >EsuBft103_20a-0001 ID=EsuBft103_20a-0001|Name=EsuBft103_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=474bp|location=Sequence derived from alignment at Scaffold_344:189655..191855- (Ectocarpus subulatus male Bft15b)
ATGCGTGCGGAGTTCAGGATCGCCAACAAGAACAAAGAGAAGAGTGGGAA
CAACGCTGAACACCACTGGTCCTTCTGTAACCAGAGGCTGTACGTCCTGC
TCATGATGGACTGGTACGAGCTGAGGGGAGGCGACAGCGCCAACGAGCAC
TGCGCAAGGTACTTCAGCGTGAGGCTCAGCGAGGAGGATGGGGAAGCTTT
CAACACTCTGTCCATGGAAGACGAGCAGTCGTCCAGCGATTCGGATGAAC
CGCCCGCTCCGAAGGGGAAGCCGCGAGAGCGGAAGGCGAGGGAGAAGGGG
AAGGTAAAACCGGAAGAAACCTTGGTCCAACTTGTGGACGCATTCAAGAC
CACACCGAACAGCGTGGCAGCGGCGATGTACAAGATTGCGGACAACGACG
CCGGGAATCCCGTGGATATGTTGATTGCTGCCTGCGATCGCGTTGATGAC
TTGGGAGAGAAGTTGGGAAAATGA back to top
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