Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft103_11 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 55 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft103_11a-0001 ID=EsuBft103_11a-0001|Name=EsuBft103_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=550bp|location=Sequence derived from alignment at Scaffold_344:92027..92893+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGATCAACGCAGGAGGCGGACTCAGGAGGAGGCTGCGTGACGTGCAGTG
CTGGGGAATGACGGTCTTAGTCCTGGAAGGTGTCTAGGAAGGTGGGTAGT
AATGTTGTTGTCTTCAGCGTGTGAGGGTCACATCAGAGAGTAAGGCTCCT
CACACCACTCATAATTAAACATCAGAATGCTTTCACAGTATCGTTACATA
TCGTTGGCGGTAATATCGTTCGGAACATCTCACCGAACGGTGTGTGATTT
TCAGGTCAACACAAAACCATATTGCGCCCTGGAGAACGGGTTCGTCTCCC
TTTTGACGCACCGCCGCGTATAATTTTTGTTCCGATAAATGGACTCAACT
CCTTCCGGGCTTGTTTGACTCACGCCTTATCTACTATCTACACCCGAATT
TCTATGGGTCGCTTCGAACAGCAAAGAAGGCAACGCGTCAGCACCCAAGA
CACCCGCCAGTAGCACAAGGCACCCGGGATAATACTTCCGCCTCCAATGT
GTGTGTATTCATATGGCGCAGAGAGCGATATCCAAGAGACCTATGCAGGT back to topprotein sequence of EsuBft103_11a-0001 >EsuBft103_11 ID=EsuBft103_11|Name=EsuBft103_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=28bp
MINAGGGLRRRLRDVQCWGMTVLVLEGV back to topmRNA from alignment at Scaffold_344:92027..92893+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft103_11a-0001 ID=EsuBft103_11a-0001|Name=EsuBft103_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=867bp|location=Sequence derived from alignment at Scaffold_344:92027..92893+ (Ectocarpus subulatus male Bft15b)
ATGATCAACGCAGGTGAGCTTTTCGATCACGCCGCGAAGCGAACCTGAAC
GACACTCGCACGAAAACAGAGGGGGTCATCCTCTTCCACTTGCAGAAGCC
GCTAAGACAACCTTGACCTACACCGTAAGGGCCAAGTGGCTGAACACAAC
CCCCGGATTGCCTGTGGGCTCTAATTGCGCCTTCTTATGTAGATGTGCCT
CCAAGGAAACTGGGCAATGGACACACAAAGAGTACACACCGGGCGTGATC
CGCCCAAATCGCCCTTGAGAGCAACAGCACCGAGGAGAGCAGCGACACAG
CATTCCGACGATGCGGATAGGTGATCGCAGGAGGCGGACTCAGGAGGAGG
CTGCGTGACGTGCAGTGCTGGGGAATGACGGTCTTAGTCCTGGAAGGTGT
CTAGGAAGGTGGGTAGTAATGTTGTTGTCTTCAGCGTGTGAGGGTCACAT
CAGAGAGTAAGGCTCCTCACACCACTCATAATTAAACATCAGAATGCTTT
CACAGTATCGTTACATATCGTTGGCGGTAATATCGTTCGGAACATCTCAC
CGAACGGTGTGTGATTTTCAGGTCAACACAAAACCATATTGCGCCCTGGA
GAACGGGTTCGTCTCCCTTTTGACGCACCGCCGCGTATAATTTTTGTTCC
GATAAATGGACTCAACTCCTTCCGGGCTTGTTTGACTCACGCCTTATCTA
CTATCTACACCCGAATTTCTATGGGTCGCTTCGAACAGCAAAGAAGGCAA
CGCGTCAGCACCCAAGACACCCGCCAGTAGCACAAGGCACCCGGGATAAT
ACTTCCGCCTCCAATGTGTGTGTATTCATATGGCGCAGAGAGCGATATCC
AAGAGACCTATGCAGGT back to topCoding sequence (CDS) from alignment at Scaffold_344:92027..92893+ >EsuBft103_11a-0001 ID=EsuBft103_11a-0001|Name=EsuBft103_11a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=87bp|location=Sequence derived from alignment at Scaffold_344:92027..92893+ (Ectocarpus subulatus male Bft15b)
ATGATCAACGCAGGAGGCGGACTCAGGAGGAGGCTGCGTGACGTGCAGTG
CTGGGGAATGACGGTCTTAGTCCTGGAAGGTGTCTAG back to top
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