Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft103_2 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 195 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-01_011570.1 |
| Date last modified | 2016-06-13 |
| Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft103_2a-0001 ID=EsuBft103_2a-0001|Name=EsuBft103_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1954bp|location=Sequence derived from alignment at Scaffold_344:29956..34111+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGTTGAACGGTTGAACCATCATGCATGACGACAACGAAGCGAGCCGGA
CAGACCCGTGCAGCCCCATGCGAACACTTCAGAGGGGAGCACAGCAGTTG
CAACGAGTCTGACGGCAGTGCCTCGAGGATAGCAGTCATGGAGGGAGCGT
CATTTTTCGCCGATGCATTTCTAACCGCTAGTCGCTGCGGAGATGCCCCA
CGGGAACCACGGGAGGTGCAGCTGGTTCCGTTTGTGCGCAACCGCACACA
GCTCACCAGCAGCAAGGACGAAGGAGAAGACCGACTCATCCAGGACTTCG
GTCCAGGTCGGCGCGTTCATGAAGCCAAGGACATGGATGAAGTGGGAGCA
GCGGGGAGGGGCACCGACTGCTTCGATCTTTCTGTGAAGAACTGGCATCG
ATACGTTGCTGCTGTTGGCGACCGTGGTCGGCGCGTTGTGTTCGATCCGA
CGGAGATGGCTAGACTGTTGCAGCCAAGTGGAAGCGGCATAGACTCTCTG
TGGAGAATGGAGAAGTTGATCGAAACGACGCTCGAACAGGAAACGCCTGG
AGGCGAGACGCTCTTGATACTAAAAGCGGTGACCGACGCGTTCTTCGTCG
CGTCACGAGCTGTCGACGATGATTCCGCCGCCATTTGGAGTTACGGCGGG
GCGCTTAGCGGGGACAAGGAGCGAGACCTTCTTGTACCAGCATTGAGACA
AGCCTGGGAGCACGCCGTGATGCATAGGAACGGCAGCCCTAACGAGTGGC
ATTCCTCAGTGGATTTGCACGTAACAGCAGCCTGGTTTCAGGCTTGGGAG
GCCGCGTATCAGGTTGAGGACGTGTTGCCTGCGAACTGGACTTGGGTACT
GGAACAGCTGGAATCGCAGGAAACTTCGGAAGGTCCCCACATAGAGGGAG
AGCTGGTGCTGGAAGCGGTCGAGGGGCTACAGCTGGGGCTACCCCCAGAG
AACTGGTCGCTGGATGATGTCAAGAGGTCTTTGCTGCTCGTGAGCGACGA
GCGCTGGTTTCGAGAGGGACAAGCGATGGTGGACCTCAGATTATTCGGCC
CAACTCGCGAGAGTACTTTCAGGAGGGTGTTCTTCGACGTACCCGGAGCT
TTTGATGGCTGTCTCAAGGACCGAGCCGGGGTGGCCTTGATTCCGCCAAC
GTTTAGAATGTACACGGCGGGCGACATTTTCGATGCTTTCGGGCACGATG
CCGTGGTGAGGTCTCGAGACATCGCCAGCGGAGAAACTTCGAGGAGAGCA
GCACTCGAAGAGGTCGAGTGCAGCAGCAGCGACGACTCGAGCAGCACAGC
TAACGACACCTCCGGGAGTGTAACGGCCGGGCCGCGGCGGGAGGTTGCTA
TTGCAGAGATCCAGGTTACCTGGGTGGATGGATACACGCATGTGCTGGGC
TGGCTGGACTCTAACGTGGTGTCCTGAACTGGCAAGCATGCGTCATGAGC
GGCAAAGGGGTAGTTAATTTCTGTGAATTGTATGTATGCCCTCTTACAGC
GGGTCGGCTTTTGTTCTTCGTTGCTTTGCATGAATTGTCGAACCGGGTAC
GTGGATATGACCAAAATCTTCGTTCCACATGTTATCTGGGTACTCGGTCG
ATGTGCTGCGGTCTGTCTACATTTGCCCTGCCTATTTCCGCTGAAAACTA
CTTCGGTGGTATAGATTTCGCCAGCCGTGCCCCCTCACGAGGACTCAGGA
CATTGATCCAGGCTTTCTGTGTGGCTCTTGAGGTAGATTCTTGTTTTTCT
CCGAGCGGTGTCATTTAGCTCCTCTATGTTTGCTGACGTCTCTTTGATTA
CCCGCCCACAAGTTCTCCTAACCTGTGGTGAACTACTGCTTGTAAACTCC
TGCACTTTGTCGAGAGTTTGGTCGCCTACACATGTATTTCGGCGAAGTCC
GTAGCGGTGCTTCGCTCACAAAAAGGCAGCAGGGACGCAAAGGCGTAAAG
ATTT back to topprotein sequence of EsuBft103_2a-0001 >EsuBft103_2 ID=EsuBft103_2|Name=EsuBft103_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=466bp
MTTTKRAGQTRAAPCEHFRGEHSSCNESDGSASRIAVMEGASFFADAFLT
ASRCGDAPREPREVQLVPFVRNRTQLTSSKDEGEDRLIQDFGPGRRVHEA
KDMDEVGAAGRGTDCFDLSVKNWHRYVAAVGDRGRRVVFDPTEMARLLQP
SGSGIDSLWRMEKLIETTLEQETPGGETLLILKAVTDAFFVASRAVDDDS
AAIWSYGGALSGDKERDLLVPALRQAWEHAVMHRNGSPNEWHSSVDLHVT
AAWFQAWEAAYQVEDVLPANWTWVLEQLESQETSEGPHIEGELVLEAVEG
LQLGLPPENWSLDDVKRSLLLVSDERWFREGQAMVDLRLFGPTRESTFRR
VFFDVPGAFDGCLKDRAGVALIPPTFRMYTAGDIFDAFGHDAVVRSRDIA
SGETSRRAALEEVECSSSDDSSSTANDTSGSVTAGPRREVAIAEIQVTWV
DGYTHVLGWLDSNVVS back to topmRNA from alignment at Scaffold_344:29956..34111+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft103_2a-0001 ID=EsuBft103_2a-0001|Name=EsuBft103_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4156bp|location=Sequence derived from alignment at Scaffold_344:29956..34111+ (Ectocarpus subulatus male Bft15b)
ATGGTTGAACGGTTGAACCATCATGCATGACGACAACGAAGCGAGCCGGA
CAGACCCGTGCAGCCCCATGCGAACACTTCAGAGGGGAGCACAGCAGTTG
CAACGAGTCTGACGGCAGTGCCTCGAGGATAGCAGTCATGGAGGGAGCGT
CATTTTTCGCCGATGCATTTCTAACCGCTAGTCGCTGCGGAGATGCCCCA
CGGGAACCACGGGAGGTGCAGCTGGTTCCGTTTGTGCGCAACCGCACACA
GCTCACCAGCAGCAAGGACGAAGGAGAAGACCGACTCATCCAGGACTTCG
GTCCAGGTCGGCGCGTTCATGAAGCCAAGGACATGGATGAAGTGGGAGCA
GCGGGGAGGGGCACCGACTGCTTCGATCTTTCTGTGAAGAACTGGCATCG
ATACGTTGCTGCTGTTGGCGACCGTGGTCGGCGCGTTGTGTTCGATCCGA
CGGAGATGGCTAGACTGTTGCAGCCAAGTGGAAGCGGCATAGACTCTCTG
TGGAGAATGGAGAAGTTGATCGAAACGACGCTCGAACAGGAAACGCCTGG
AGGCGAGACGCTCTTGATACTAAAAGCGGTGACCGACGCGTTCTTCGTCG
CGTCACGAGCTGTCGACGATGATTCCGCCGCCATTTGGAGTTACGGCGGG
GCGCTTAGCGGGGACAAGGAGCGAGACCTTCTTGTACCAGCATTGAGACA
AGCCTGGGAGCACGCCGTGATGCATAGGAACGGCAGCCCTAACGAGTGGC
ATTCCTCAGTGGATTTGCACGTAACAGCAGCCTGGTTTCAGGCTTGGGAG
GCCGCGTATCAGGTTGAGGACGTGTTGCCTGCGAACTGGACTTGGGTACT
GGAACAGCTGGAATCGCAGGAAACTTCGGAAGGGTGAGAGAGAAAGAGCT
TTCGTAATCACGATGCATCTTTGTTCAGGTTGGATGCATGCACCACCGTG
CTACAGTGTACTTTCACGCCGTGTCTTCGTTCCCCGATGTAGCCTCCGTG
ATGTGTACACGGCGGGTGTTGTGTGATCCACAGCCGGATCATGGTCTACC
CCTAGAAAGGGCGGGAAAATTTTAAAATTTTAACGTTGTCGGACCCTTGG
CCCTTCTCGCCTGACTGCAATACCACATTTTATTGACCAGCAGTCTAGTA
TCCAGCAGTACTGTAGTTCAGCATGTTTCCATTAACATTCAATGCTGTAA
GAGTTCAACTTCAATCGTGGGGTATTTTTATTTTCGCCACAACTTTCGCA
GTTAAAACTCTGTGATTTCGTTATTGTAGAGGACCAATTCAAAAGTAGGG
TTGGGTACTGGCGCGCAGCGCCAGTACAAAGTATTCTGGCTGCTGCGCGA
TTTGGCTTCAGCATAAAAAGTGACTGATTTTGGCCCATCTGGCAGAGGCA
CTATCGCGGGGAAAACGATAGAAATTTCGAGTTCAACGACTGAATTTGTT
GGTTTTCGACATAAGGAAATATTTATCTAGAAATATTGAGATGTTACTCC
CCAGCAACCAAGTGACATCCATCAGTTGGGTTCATGAGCACGCCCTCGTA
TACTGGACTCTACAGCCCCTCTCTCGCAGAAACACGAAGGACTCTACGAA
GGACACAACGACCCGGCAGCCCTCAACGTATACCAAGAAACCAGCTAAGA
GCTAAGAAGCTAAAAAGGAAACGACTAGTCCATCTACTAGTCTACCTAGA
AACGACAGGATAAGTTGCGCAACAAACGAACCACCAGCTAGATAGAATGT
CCAAGTAGGAGATGAGAACAGCGCCAAAGATGCACAACCGAAACCTTAAC
CGCGCACGAATCACTGCCGCTAGCACCATAACAACAGGCAGAGACTTAGA
ATGGTGATTCTTTGCGCCACCAGCGACCTGTAGCAGAGAACCAAACTACG
ATCCAGCCCATCAAAGACAGCCACCATCAAAGGCAGCCACTACCCTAGCC
CCTCTTCGCGGCCGCGGGGGTGTTCGATTGTTCCGATAGATGGGTTTCCG
CTGGTTCTTGAGGCCCATTATTAAGGAAATCTGCGAATATTAGAATGTAC
TGGAGTACTGGCTGCTGACGCAGCCAGTGCACATGTGCTACCAGTGCATG
TGCACTGGCAGTACGTACTGGTTCAGCACCCAACCCTACCAATTTGTATT
TTCGAAGCATCCGCCTGATTTCTTGCCAAGGGCCGCGACTAGTTTCTAGT
CGGAATCCAAGAAAATAGGAGAGATTATATATCCCAAGAAGGTTCGGCTC
GCAGAGTTCCAACTGCACATCGGTATTATAGCACATCGTGGAGCACCCAC
ATGCGGGTTGGCAAGCACCCCCAACTAGATAATAAATATATCTGTTTTGG
GCTCTGCTGTGTCGAAGGTTGAAGCTAGCGGCGTACCGAAACGTTCCCAC
ATGTGAAACCAGTAGTGCGGGTTAACAGATAAAAGGATCACGGTATTGCA
GTTTACGAAGTACGTTGCTGTTGAACAAGAAGGGAACGAATATCGCGTGT
ATTTCCAGCTGTTTCCGTTGCTATTCTTCACATTAACAACCGTTTTGATA
TCTGCCCACTTCAAACATCCATACGGGTCCAACTGACGCCGCTGGCGCCT
TCGGTATTCACAGAGTAACTCACGCCAAGGATGGTACACAACAGCAGTAA
GAAAACTCTAAGAGAGACACATCGAACCTAGAGAATAATGATAAAACAAT
GCGCGGCACGAGCAGTACACTATGCTATAAACAAGCAGCGACATCCATGC
CGAAACGCCCCGCAACACTGACGTTGAAGTGCGGCGTTGTTCTGTGACTT
TCACACACGCCTGTCTTGATCGCAGTCCCCACATAGAGGGAGAGCTGGTG
CTGGAAGCGGTCGAGGGGCTACAGCTGGGGCTACCCCCAGAGAACTGGTC
GCTGGATGATGTCAAGAGGTCTTTGCTGCTCGTGAGCGACGAGCGCTGGT
TTCGAGAGGGACAAGCGATGGTGGACCTCAGATTATTCGGCCCAACTCGC
GAGAGTACTTTCAGGAGGGTGTTCTTCGACGTACCCGGAGCTTTTGATGG
CTGTCTCAAGGTACCTATGGCGTGGTTGTCCCAATATTTTCGTTCCCATT
TCCGTGACACTTCGGGAGTTGGTCTGTTCTGGATAGATAGTCACTGGGTA
GAGCACTTGATCGCCTTGGTGACAAAGTGGCGTGAGTCGACGGGAGGGGT
GTGTCCAGATCCCGAGTACTGCTGTACTTCGGAGGTGTCCTCTTCGCCTT
GCTACTACCTACTACTACCGATTGCGCGACACCCAGACATGCCTTTATTC
CTGACGGTCTTAAACATCAGGACCGAGCCGGGGTGGCCTTGATTCCGCCA
ACGTTTAGAATGTACACGGCGGGCGACATTTTCGATGCTTTCGGGCACGA
TGCCGTGGTGAGGTCTCGAGACATCGCCAGCGGAGAAACTTCGAGGAGAG
CAGCACTCGAAGAGGTCGAGTGCAGCAGCAGCGACGACTCGAGCAGCACA
GCTAACGACACCTCCGGGAGTGTAACGGCCGGGCCGCGGCGGGAGGTTGC
TATTGCAGAGATCCAGGTTACCTGGGTGGATGGATACACGCATGTGCTGG
GCTGGCTGGACTCTAACGTGGTGTCCTGAACTGGCAAGCATGCGTCATGA
GCGGCAAAGGGGTAGTTAATTTCTGTGAATTGTATGTATGCCCTCTTACA
GCGGGTCGGCTTTTGTTCTTCGTTGCTTTGCATGAATTGTCGAACCGGGT
ACGTGGATATGACCAAAATCTTCGTTCCACATGTTATCTGGGTACTCGGT
CGATGTGCTGCGGTCTGTCTACATTTGCCCTGCCTATTTCCGCTGAAAAC
TACTTCGGTGGTATAGATTTCGCCAGCCGTGCCCCCTCACGAGGACTCAG
GACATTGATCCAGGCTTTCTGTGTGGCTCTTGAGGTAGATTCTTGTTTTT
CTCCGAGCGGTGTCATTTAGCTCCTCTATGTTTGCTGACGTCTCTTTGAT
TACCCGCCCACAAGTTCTCCTAACCTGTGGTGAACTACTGCTTGTAAACT
CCTGCACTTTGTCGAGAGTTTGGTCGCCTACACATGTATTTCGGCGAAGT
CCGTAGCGGTGCTTCGCTCACAAAAAGGCAGCAGGGACGCAAAGGCGTAA
AGATTT back to topCoding sequence (CDS) from alignment at Scaffold_344:29956..34111+ >EsuBft103_2a-0001 ID=EsuBft103_2a-0001|Name=EsuBft103_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1401bp|location=Sequence derived from alignment at Scaffold_344:29956..34111+ (Ectocarpus subulatus male Bft15b)
ATGACGACAACGAAGCGAGCCGGACAGACCCGTGCAGCCCCATGCGAACA
CTTCAGAGGGGAGCACAGCAGTTGCAACGAGTCTGACGGCAGTGCCTCGA
GGATAGCAGTCATGGAGGGAGCGTCATTTTTCGCCGATGCATTTCTAACC
GCTAGTCGCTGCGGAGATGCCCCACGGGAACCACGGGAGGTGCAGCTGGT
TCCGTTTGTGCGCAACCGCACACAGCTCACCAGCAGCAAGGACGAAGGAG
AAGACCGACTCATCCAGGACTTCGGTCCAGGTCGGCGCGTTCATGAAGCC
AAGGACATGGATGAAGTGGGAGCAGCGGGGAGGGGCACCGACTGCTTCGA
TCTTTCTGTGAAGAACTGGCATCGATACGTTGCTGCTGTTGGCGACCGTG
GTCGGCGCGTTGTGTTCGATCCGACGGAGATGGCTAGACTGTTGCAGCCA
AGTGGAAGCGGCATAGACTCTCTGTGGAGAATGGAGAAGTTGATCGAAAC
GACGCTCGAACAGGAAACGCCTGGAGGCGAGACGCTCTTGATACTAAAAG
CGGTGACCGACGCGTTCTTCGTCGCGTCACGAGCTGTCGACGATGATTCC
GCCGCCATTTGGAGTTACGGCGGGGCGCTTAGCGGGGACAAGGAGCGAGA
CCTTCTTGTACCAGCATTGAGACAAGCCTGGGAGCACGCCGTGATGCATA
GGAACGGCAGCCCTAACGAGTGGCATTCCTCAGTGGATTTGCACGTAACA
GCAGCCTGGTTTCAGGCTTGGGAGGCCGCGTATCAGGTTGAGGACGTGTT
GCCTGCGAACTGGACTTGGGTACTGGAACAGCTGGAATCGCAGGAAACTT
CGGAAGGTCCCCACATAGAGGGAGAGCTGGTGCTGGAAGCGGTCGAGGGG
CTACAGCTGGGGCTACCCCCAGAGAACTGGTCGCTGGATGATGTCAAGAG
GTCTTTGCTGCTCGTGAGCGACGAGCGCTGGTTTCGAGAGGGACAAGCGA
TGGTGGACCTCAGATTATTCGGCCCAACTCGCGAGAGTACTTTCAGGAGG
GTGTTCTTCGACGTACCCGGAGCTTTTGATGGCTGTCTCAAGGACCGAGC
CGGGGTGGCCTTGATTCCGCCAACGTTTAGAATGTACACGGCGGGCGACA
TTTTCGATGCTTTCGGGCACGATGCCGTGGTGAGGTCTCGAGACATCGCC
AGCGGAGAAACTTCGAGGAGAGCAGCACTCGAAGAGGTCGAGTGCAGCAG
CAGCGACGACTCGAGCAGCACAGCTAACGACACCTCCGGGAGTGTAACGG
CCGGGCCGCGGCGGGAGGTTGCTATTGCAGAGATCCAGGTTACCTGGGTG
GATGGATACACGCATGTGCTGGGCTGGCTGGACTCTAACGTGGTGTCCTG
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