Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft1014_7 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 2 |
| Length | 117 |
| Hectar predicted targeting category | no signal peptide or anchor |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft1014_7a-0001 ID=EsuBft1014_7a-0001|Name=EsuBft1014_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1176bp|location=Sequence derived from alignment at Scaffold_119:182993..184550+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGCCCGTAAGAGAACGGAGGCCCAGCACCGGACAACCATGCGCGGCGC
GCCCCGGGCATGCAACAACGTCTGTCTGGACGACACGACGTACCCGACGT
GGAAAATCGGGTCCTCGGGTACCGTTTAAAGGGCCATGGGCGGGTCGTGG
GATGCATACTTCGCGGCTGCCGTTCAGACTCTCTTTCTGTTCATCGTTCG
GTGCATAGCTGGTGCCCTACAAGAGCTGCGCACGAGACGGTATGAACTCC
TTGCAGGGCTGGTTGTTGGCGCTCTTGTATTCCCGGGAGCGACAGCCCAT
ACGTTTATACCCTTTTGGTCGTGGACCCTCCAGTGGGCCCTCCAGGTCTG
CGGACATTGGTGGTGGTTGTGTGCGAAGTTGGACCCGGCGATCTCGGTCT
CTGTCGGTTCGATGTGTTTTGCGCCGCTGCTACGTCGTGAAATCTACCGC
CGGAACATGCGATTGATGTCGGTCATCGAGTACGTCATTGAAGGCCCCAT
CCACATGCTACTGGTGTCACCCTATCTCCGTCGAGGAGTGTTGTGGCTGG
TGCAAGCACTGTGTATCTGGGCCATGTTGGTTTCGATGCTCCGTGTTCAA
GTTCGGGAGTGGCTGTGTGCTCACCCGGCGATGTCTGCGCCACCCAGGCT
GACTGCCCAGCTCTGTGGTCAACTTAGGGTGTGGGTGTTTGCGCACCCGA
CGATGTGCGCGTCGGCCGCTGTGTTTCTTATCGTCTTCCTTTGTTGGGGG
TCGGTGCTCCGGGCCGGCCGCCGCGCACGGTTGTCCGACCAGTGCAAACG
TCGGGTGATGGAGGCGTACTTGTTGGCGGTGGTGTTGGTGATCCCGTTAC
TCTCGTACAAGACTCCTCTGGAGAGATGCCAGCCTGCGATCGTGTTTTAC
CTCTCCGTGACGTTGTTCGGTGTGTTGCAAGCGATGCCAACACCGCCACA
GCCTGCTCGGGAACAACGCCCCCCAAAGTTGACTACTAAGCACAAAGGCG
CACGGGCTCGTCGAGTCATCCACAGGCGCATGTACGGCAGGAACAGTCTA
AGAGGCGCGACGCCTCTGCCGTGCACGGGATTCGGGAGAAAACGCCGCAG
ACGAGGGTCTTGCTCAAGAGGTTCAACACAGGAAGGAGCTAGTAGCACGA
GTTTCTTGTTGTGTTCTCCTCGTAGA back to topprotein sequence of EsuBft1014_7a-0001 >EsuBft1014_7 ID=EsuBft1014_7|Name=EsuBft1014_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=42bp
MARKRTEAQHRTTMRGAPRACNNVCLDDTTYPTWKIGSSGTV back to topmRNA from alignment at Scaffold_119:182993..184550+ Legend: exonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft1014_7a-0001 ID=EsuBft1014_7a-0001|Name=EsuBft1014_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1558bp|location=Sequence derived from alignment at Scaffold_119:182993..184550+ (Ectocarpus subulatus male Bft15b)
ATGGCCCGTAAGAGAACGGAGGCCCAGCACCGGACAACCATGCGCGGCGC
GCCCCGGTACTCGGTGACCACGACTAAAAACAATACAAGCGAAACGATAA
CTTTTTGGCCAGTTGTCGACGACACAGAGTACTCGATGTTTGGAAATCGC
TCCAGGGTCTACAATCTGCAACAACCGTGGTCTTGCAACGAGTGCAACGT
CTAAGCGAAAATAAAGCTTTCCGCAAACTTGTAGAACGGAACTCCTTTCT
TACTGAGTTTGAAGTTATGTCCATCCCCTGCGCGTAGACACCTCCAACGA
TCGTTGGAGAGAGGACAATCCCCATGGCAATGGTATACACCAACATTTGT
ACCGGAATGGTGTTACTAAGATCCGGGTTCCACACCGCCATTTCGCGTGT
TGTTTTGTGGTATTGTTTGCTCCCCATATCCCCGTCAGGGCATGCAACAA
CGTCTGTCTGGACGACACGACGTACCCGACGTGGAAAATCGGGTCCTCGG
GTACCGTTTAAAGGGCCATGGGCGGGTCGTGGGATGCATACTTCGCGGCT
GCCGTTCAGACTCTCTTTCTGTTCATCGTTCGGTGCATAGCTGGTGCCCT
ACAAGAGCTGCGCACGAGACGGTATGAACTCCTTGCAGGGCTGGTTGTTG
GCGCTCTTGTATTCCCGGGAGCGACAGCCCATACGTTTATACCCTTTTGG
TCGTGGACCCTCCAGTGGGCCCTCCAGGTCTGCGGACATTGGTGGTGGTT
GTGTGCGAAGTTGGACCCGGCGATCTCGGTCTCTGTCGGTTCGATGTGTT
TTGCGCCGCTGCTACGTCGTGAAATCTACCGCCGGAACATGCGATTGATG
TCGGTCATCGAGTACGTCATTGAAGGCCCCATCCACATGCTACTGGTGTC
ACCCTATCTCCGTCGAGGAGTGTTGTGGCTGGTGCAAGCACTGTGTATCT
GGGCCATGTTGGTTTCGATGCTCCGTGTTCAAGTTCGGGAGTGGCTGTGT
GCTCACCCGGCGATGTCTGCGCCACCCAGGCTGACTGCCCAGCTCTGTGG
TCAACTTAGGGTGTGGGTGTTTGCGCACCCGACGATGTGCGCGTCGGCCG
CTGTGTTTCTTATCGTCTTCCTTTGTTGGGGGTCGGTGCTCCGGGCCGGC
CGCCGCGCACGGTTGTCCGACCAGTGCAAACGTCGGGTGATGGAGGCGTA
CTTGTTGGCGGTGGTGTTGGTGATCCCGTTACTCTCGTACAAGACTCCTC
TGGAGAGATGCCAGCCTGCGATCGTGTTTTACCTCTCCGTGACGTTGTTC
GGTGTGTTGCAAGCGATGCCAACACCGCCACAGCCTGCTCGGGAACAACG
CCCCCCAAAGTTGACTACTAAGCACAAAGGCGCACGGGCTCGTCGAGTCA
TCCACAGGCGCATGTACGGCAGGAACAGTCTAAGAGGCGCGACGCCTCTG
CCGTGCACGGGATTCGGGAGAAAACGCCGCAGACGAGGGTCTTGCTCAAG
AGGTTCAACACAGGAAGGAGCTAGTAGCACGAGTTTCTTGTTGTGTTCTC
CTCGTAGA back to topCoding sequence (CDS) from alignment at Scaffold_119:182993..184550+ >EsuBft1014_7a-0001 ID=EsuBft1014_7a-0001|Name=EsuBft1014_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=129bp|location=Sequence derived from alignment at Scaffold_119:182993..184550+ (Ectocarpus subulatus male Bft15b)
ATGGCCCGTAAGAGAACGGAGGCCCAGCACCGGACAACCATGCGCGGCGC
GCCCCGGGCATGCAACAACGTCTGTCTGGACGACACGACGTACCCGACGT
GGAAAATCGGGTCCTCGGGTACCGTTTAA back to top
|