EsuBft979_5 (polypeptide) Ectocarpus subulatus male Bft15b

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	EsuBft979_5a-0001
Unique Name	EsuBft979_5
Type	polypeptide
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Sequence length	455

Homology

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BLAST of EsuBft979_5a-0001 vs. uniprot
Match: A0A6H5LEH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEH4_9PHAE)

HSP 1 Score: 888 bits (2295), Expect = 0.000e+0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 0

Query:    1 MDQGDRGRGGPESQEIIQELFLNTGGLVGAVTSVEGTGQLITGTRNDESGWSILPPGPGREKTTAATAAAASLGNRLTVHTIRDTGGRVLGLGSSSSLRAAGXXXXXXXXXGDEDAVVGRLESVAEAWAPHEGAVTGVDVAGGGFESLGGVSGVVTSGGDGCLRLFELTPGDDFDEDEDGSPGDGPSLGLVGQVPTHSDRATGVAATRRRAVTVGEDGVASVVDLQRLADDHGGSAGGGVGGGLVWTGRTKGAMPLSGVTFQGESEEVFATVGCNPRGQLLVWDARTDGSRPVVRGALGCIRGSEAPYLCVASQPFAPEVFACGVSTGEVIVWDVRTGVPLHELQAQDETSAAGGSWGVTFHPRSPRHLFSCSGTGVLTKWYMPPEGQAHEPAAVDGGEWGGGGWESLRGARHLYELPSRSGLVGVCYDETADTIAAVSKHGHVVVAHGVAGLRL 455
            MDQGDRGRGGPESQEIIQELFLNTGGLVGAVTSVEGTGQLITGTRNDESGWSILPPGPGREKTTAATAAAASLGNRLTVHTIRDTGGRVLGLGSSSSLRAAGXXXXXXXXXGDEDAVVGRLESVAEAWAPHEGAVTGVDVAGGGFESLGGVSGVVTSGGDGCLRLFELTPGDDFDEDEDGSPGDGPSLGLVGQVPTHSDRATGVAATRRRAVTVGEDGVASVVDLQRLADDHGGSAGGGVGGGLVWTGRTKGAMPLSGVTFQGESEEVFATVGCNPRGQLLVWDARTDGSRPVVRGALGCIRGSEAPYLCVASQPFAPEVFACGVSTGEVIVWDVRTGVPLHELQAQDETSAAGGSWGVTFHPRSPRHLFSCSGTGVLTKWYMPPEGQAHEPAAVDGGEWGGGGWESLRGARHLYELPSRSGLVGVCYDETADTIAAVSKHGHVVVAHGVAGLRL
Sbjct:    1 MDQGDRGRGGPESQEIIQELFLNTGGLVGAVTSVEGTGQLITGTRNDESGWSILPPGPGREKTTAATAAAASLGNRLTVHTIRDTGGRVLGLGSSSSLRAAGXXXXXXXXXGDEDAVVGRLESVAEAWAPHEGAVTGVDVAGGGFESLGGVSGVVTSGGDGCLRLFELTPGDDFDEDEDGSPGDGPSLGLVGQVPTHSDRATGVAATRRRAVTVGEDGVASVVDLQRLADDHGGSAGGGVGGGLVWTGRTKGAMPLSGVTFQGESEEVFATVGCNPRGQLLVWDARTDGSRPVVRGALGCIRGSEAPYLCVASQPFAPEVFACGVSTGEVIVWDVRTGVPLHELQAQDETSAAGGSWGVTFHPRSPRHLFSCSGTGVLTKWYMPPEGQAHEPAAVDGGEWGGGGWESLRGARHLYELPSRSGLVGVCYDETADTIAAVSKHGHVVVAHGVAGLRL 455

[Close]

BLAST of EsuBft979_5a-0001 vs. uniprot
Match: A0A6H5LEH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LEH4_9PHAE)

HSP 1 Score: 890 bits (2301), Expect = 0.000e+0
Identity = 455/455 (100.00%), Postives = 455/455 (100.00%), Query Frame = 3

Query:  126 MDQGDRGRGGPESQEIIQELFLNTGGLVGAVTSVEGTGQLITGTRNDESGWSILPPGPGREKTTAATAAAASLGNRLTVHTIRDTGGRVLGLGSSSSLRAAGXXXXXXXXXGDEDAVVGRLESVAEAWAPHEGAVTGVDVAGGGFESLGGVSGVVTSGGDGCLRLFELTPGDDFDEDEDGSPGDGPSLGLVGQVPTHSDRATGVAATRRRAVTVGEDGVASVVDLQRLADDHGGSAGGGVGGGLVWTGRTKGAMPLSGVTFQGESEEVFATVGCNPRGQLLVWDARTDGSRPVVRGALGCIRGSEAPYLCVASQPFAPEVFACGVSTGEVIVWDVRTGVPLHELQAQDETSAAGGSWGVTFHPRSPRHLFSCSGTGVLTKWYMPPEGQAHEPAAVDGGEWGGGGWESLRGARHLYELPSRSGLVGVCYDETADTIAAVSKHGHVVVAHGVAGLRL 1490
            MDQGDRGRGGPESQEIIQELFLNTGGLVGAVTSVEGTGQLITGTRNDESGWSILPPGPGREKTTAATAAAASLGNRLTVHTIRDTGGRVLGLGSSSSLRAAGXXXXXXXXXGDEDAVVGRLESVAEAWAPHEGAVTGVDVAGGGFESLGGVSGVVTSGGDGCLRLFELTPGDDFDEDEDGSPGDGPSLGLVGQVPTHSDRATGVAATRRRAVTVGEDGVASVVDLQRLADDHGGSAGGGVGGGLVWTGRTKGAMPLSGVTFQGESEEVFATVGCNPRGQLLVWDARTDGSRPVVRGALGCIRGSEAPYLCVASQPFAPEVFACGVSTGEVIVWDVRTGVPLHELQAQDETSAAGGSWGVTFHPRSPRHLFSCSGTGVLTKWYMPPEGQAHEPAAVDGGEWGGGGWESLRGARHLYELPSRSGLVGVCYDETADTIAAVSKHGHVVVAHGVAGLRL
Sbjct:    1 MDQGDRGRGGPESQEIIQELFLNTGGLVGAVTSVEGTGQLITGTRNDESGWSILPPGPGREKTTAATAAAASLGNRLTVHTIRDTGGRVLGLGSSSSLRAAGXXXXXXXXXGDEDAVVGRLESVAEAWAPHEGAVTGVDVAGGGFESLGGVSGVVTSGGDGCLRLFELTPGDDFDEDEDGSPGDGPSLGLVGQVPTHSDRATGVAATRRRAVTVGEDGVASVVDLQRLADDHGGSAGGGVGGGLVWTGRTKGAMPLSGVTFQGESEEVFATVGCNPRGQLLVWDARTDGSRPVVRGALGCIRGSEAPYLCVASQPFAPEVFACGVSTGEVIVWDVRTGVPLHELQAQDETSAAGGSWGVTFHPRSPRHLFSCSGTGVLTKWYMPPEGQAHEPAAVDGGEWGGGGWESLRGARHLYELPSRSGLVGVCYDETADTIAAVSKHGHVVVAHGVAGLRL 455

The following BLAST results are available for this feature:

BLAST of EsuBft979_5a-0001 vs. uniprot
BLAST of EsuBft979_5a-0001 vs. uniprot

BLAST of EsuBft979_5a-0001 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5LEH4_9PHAE	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

BLAST of EsuBft979_5a-0001 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1


Match Name	E-value	Identity	Description
A0A6H5LEH4_9PHAE	0.000e+0	100.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 455..455
None	No IPR available	PANTHER	PTHR22652	NUCLEOPORIN NUP43	coord: 66..384
IPR001680	WD40 repeat	SMART	SM00320	WD40_4	coord: 121..167 e-value: 6.2 score: 12.0 coord: 187..224 e-value: 87.0 score: 4.8 coord: 294..334 e-value: 17.0 score: 9.3 coord: 337..382 e-value: 2.7 score: 14.3
IPR015943	WD40/YVTN repeat-like-containing domain superfamily	GENE3D	2.130.10.10		coord: 111..393 e-value: 7.6E-25 score: 89.9
IPR036322	WD40-repeat-containing domain superfamily	SUPERFAMILY	50978	WD40 repeat-like	coord: 154..446

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Scaffold_565	contig	Scaffold_565:555348..562049 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus subulatus male Bft15b	2020-06-19

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
EsuBft979_5a-0001	EsuBft979_5a-0001	Ectocarpus subulatus male Bft15b	mRNA	Scaffold_565 554756..562174 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>EsuBft979_5 ID=EsuBft979_5|Name=EsuBft979_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=455bp
MDQGDRGRGGPESQEIIQELFLNTGGLVGAVTSVEGTGQLITGTRNDESG
WSILPPGPGREKTTAATAAAASLGNRLTVHTIRDTGGRVLGLGSSSSLRA
AGTGGGGGGEGGDEDAVVGRLESVAEAWAPHEGAVTGVDVAGGGFESLGG
VSGVVTSGGDGCLRLFELTPGDDFDEDEDGSPGDGPSLGLVGQVPTHSDR
ATGVAATRRRAVTVGEDGVASVVDLQRLADDHGGSAGGGVGGGLVWTGRT
KGAMPLSGVTFQGESEEVFATVGCNPRGQLLVWDARTDGSRPVVRGALGC
IRGSEAPYLCVASQPFAPEVFACGVSTGEVIVWDVRTGVPLHELQAQDET
SAAGGSWGVTFHPRSPRHLFSCSGTGVLTKWYMPPEGQAHEPAAVDGGEW
GGGGWESLRGARHLYELPSRSGLVGVCYDETADTIAAVSKHGHVVVAHGV
AGLRL

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001680	WD40_repeat
IPR015943	WD40/YVTN_repeat-like_dom_sf
IPR036322	WD40_repeat_dom_sf