EsuBft913_4 (polypeptide) Ectocarpus subulatus male Bft15b

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NameEsuBft913_4a-0001
Unique NameEsuBft913_4
Typepolypeptide
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Sequence length665
Homology
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BLAST of EsuBft913_4a-0001 vs. uniprot
Match: D7FK60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK60_ECTSI)

HSP 1 Score: 605 bits (1560), Expect = 3.840e-207
Identity = 558/669 (83.41%), Postives = 570/669 (85.20%), Query Frame = 0 
Query:    1 MIRTHVRVFQSRCCSRGATASQLIAAQREPRTTTTRAAPRT-IAVDTLPTRGISTAPRSLESETVARAAASTAIRPRGPLSPPRRLLRNRPAEDGKRFVREAQRLGGQGKWGRVMSLLRQAEGDGAVVNHIMYNAAIGALSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXAMEACRAARGGRPDEAYGILSRMTAWTGGKSVKPNRRCFNIVLAAFAKSGRSRRALSLVEVDMVNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCLNAASRRGEWELAFGLLEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTAPXXXXXXXXXXXXXXXXXXXXXXXXXXRKDMPAAGVAPDVASYASAXXXXXXXXXXXXXXALWDEARAALPPSALNSHAXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLPPDLRPFNAXXXXXXXXXXXXXXXXXXXXMEEAGLEPDVVSFTSAIAAFRGGKAAAAAAGA---GERELGLALGLLEEMKSRGLPPTSFSHSAAIKLCTDANRHERALGLFEELKASGQAADEPAFTAIIDSCARHSGSSNGGGEGRWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNGGQWHLGSSLLRRMAAVDGVDPNVSSMNALIRGLS 665
            M+R HVRVFQSRCCSRGATA+Q IAAQREPRTTT  AAPRT  A DTLPTRG S+APRSLESE VARAAA+TAIRPR P SPPRRLLRNRPAEDGKRFVR AQRLGGQGKW RV+SLLRQAEGDGAVVNHIMYNAAIGALSKSXXXXXXXXXXXXXXXXXXXXXXXXXXX  EACRAARGGRPDEAYGILSRMTA TGGKSVKPN RCFN VLAAFAKSGRSR+ALSLVE DMVNA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GEWELAFGLLED  XXXXXXXXXXXXXXXXXXXXXXXXXXX          GSTAPXXXXXXXXXXXXXXXXXXXXXX    RKDMPAAGVA DV      XXXXXXXXXXXXXXALWDEARAALPPSALNSHAXXXXXXXXXXXXXXXXXXXXXXXXX A GLPP+LR    XXXXXXXXXXXXXXXXXXXXMEEAGLEPDVVSFTSAIAAFRGGKAA         GEREL LALGLLEEMKSRGLPPTSFSHSAAIKLCTDAN+HERAL LFEEL+ASGQAADEPAFTAIIDSCARHSGS +GGGEGRW                             CNGG+WHLGSSLLRRM+AVDGVDPNVSSMNALIRGLS
Sbjct:    1 MVRAHVRVFQSRCCSRGATAAQPIAAQREPRTTTRAAAPRTPAAADTLPTRGNSSAPRSLESEAVARAAAATAIRPRRPFSPPRRLLRNRPAEDGKRFVRVAQRLGGQGKWERVLSLLRQAEGDGAVVNHIMYNAAIGALSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEACRAARGGRPDEAYGILSRMTARTGGKSVKPNMRCFNTVLAAFAKSGRSRQALSLVEEDMVNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEWELAFGLLEDMGXXXXXXXXXXXXXXXXXXXXXXXXXXXPALLRAMKEGGSTAPXXXXXXXXXXXXXXXXXXXXXXVSLLRKDMPAAGVAXDVTXXXXXXXXXXXXXXXXXXXALWDEARAALPPSALNSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGLPPNLRSXXXXXXXXXXXXXXXXXXXXXXXMEEAGLEPDVVSFTSAIAAFRGGKAAXXXXXXXXXGERELSLALGLLEEMKSRGLPPTSFSHSAAIKLCTDANQHERALELFEELRASGQAADEPAFTAIIDSCARHSGSGSGGGEGRWETAVALLDEMEASGVAPSVATFNGAIRACCNGGKWHLGSSLLRRMSAVDGVDPNVSSMNALIRGLS 669
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BLAST of EsuBft913_4a-0001 vs. uniprot
Match: D7FK60_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FK60_ECTSI)

HSP 1 Score: 605 bits (1561), Expect = 3.630e-204
Identity = 558/669 (83.41%), Postives = 570/669 (85.20%), Query Frame = 1 
Query:   55 MIRTHVRVFQSRCCSRGATASQLIAAQREPRTTTTRAAPRT-IAVDTLPTRGISTAPRSLESETVARAAASTAIRPRGPLSPPRRLLRNRPAEDGKRFVREAQRLGGQGKWGRVMSLLRQAEGDGAVVNHIMYNAAIGALSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXAMEACRAARGGRPDEAYGILSRMTAWTGGKSVKPNRRCFNIVLAAFAKSGRSRRALSLVEVDMVNASXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNCLNAASRRGEWELAFGLLEDXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGSTAPXXXXXXXXXXXXXXXXXXXXXXXXXXRKDMPAAGVAPDVASYASAXXXXXXXXXXXXXXALWDEARAALPPSALNSHAXXXXXXXXXXXXXXXXXXXXXXXXXAAPGLPPDLRPFNAXXXXXXXXXXXXXXXXXXXXMEEAGLEPDVVSFTSAIAAFRGGKAAAAAAGA---GERELGLALGLLEEMKSRGLPPTSFSHSAAIKLCTDANRHERALGLFEELKASGQAADEPAFTAIIDSCARHSGSSNGGGEGRWXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCNGGQWHLGSSLLRRMAAVDGVDPNVSSMNALIRGLS 2049
            M+R HVRVFQSRCCSRGATA+Q IAAQREPRTTT  AAPRT  A DTLPTRG S+APRSLESE VARAAA+TAIRPR P SPPRRLLRNRPAEDGKRFVR AQRLGGQGKW RV+SLLRQAEGDGAVVNHIMYNAAIGALSKSXXXXXXXXXXXXXXXXXXXXXXXXXXX  EACRAARGGRPDEAYGILSRMTA TGGKSVKPN RCFN VLAAFAKSGRSR+ALSLVE DMVNA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX         GEWELAFGLLED  XXXXXXXXXXXXXXXXXXXXXXXXXXX          GSTAPXXXXXXXXXXXXXXXXXXXXXX    RKDMPAAGVA DV      XXXXXXXXXXXXXXALWDEARAALPPSALNSHAXXXXXXXXXXXXXXXXXXXXXXXXX A GLPP+LR    XXXXXXXXXXXXXXXXXXXXMEEAGLEPDVVSFTSAIAAFRGGKAA         GEREL LALGLLEEMKSRGLPPTSFSHSAAIKLCTDAN+HERAL LFEEL+ASGQAADEPAFTAIIDSCARHSGS +GGGEGRW                             CNGG+WHLGSSLLRRM+AVDGVDPNVSSMNALIRGLS
Sbjct:    1 MVRAHVRVFQSRCCSRGATAAQPIAAQREPRTTTRAAAPRTPAAADTLPTRGNSSAPRSLESEAVARAAAATAIRPRRPFSPPRRLLRNRPAEDGKRFVRVAQRLGGQGKWERVLSLLRQAEGDGAVVNHIMYNAAIGALSKSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXEACRAARGGRPDEAYGILSRMTARTGGKSVKPNMRCFNTVLAAFAKSGRSRQALSLVEEDMVNAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGEWELAFGLLEDMGXXXXXXXXXXXXXXXXXXXXXXXXXXXPALLRAMKEGGSTAPXXXXXXXXXXXXXXXXXXXXXXVSLLRKDMPAAGVAXDVTXXXXXXXXXXXXXXXXXXXALWDEARAALPPSALNSHAXXXXXXXXXXXXXXXXXXXXXXXXXXAAGLPPNLRSXXXXXXXXXXXXXXXXXXXXXXXMEEAGLEPDVVSFTSAIAAFRGGKAAXXXXXXXXXGERELSLALGLLEEMKSRGLPPTSFSHSAAIKLCTDANQHERALELFEELRASGQAADEPAFTAIIDSCARHSGSGSGGGEGRWETAVALLDEMEASGVAPSVATFNGAIRACCNGGKWHLGSSLLRRMSAVDGVDPNVSSMNALIRGLS 669
The following BLAST results are available for this feature:
BLAST of EsuBft913_4a-0001 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK60_ECTSI3.840e-20783.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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BLAST of EsuBft913_4a-0001 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FK60_ECTSI3.630e-20483.41Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002885Pentatricopeptide repeatTIGRFAMTIGR00756TIGR00756coord: 352..385
e-value: 4.9E-6
score: 24.4
coord: 461..493
e-value: 2.5E-9
score: 34.8
coord: 207..240
e-value: 0.0025
score: 15.8
coord: 130..164
e-value: 5.1E-7
score: 27.5
coord: 243..277
e-value: 1.2E-5
score: 23.1
coord: 279..312
e-value: 1.4E-4
score: 19.8
IPR002885Pentatricopeptide repeatPFAMPF13041PPR_2coord: 128..173
e-value: 4.1E-8
score: 33.3
coord: 275..323
e-value: 8.2E-9
score: 35.5
coord: 461..502
e-value: 2.2E-8
score: 34.2
IPR002885Pentatricopeptide repeatPFAMPF13812PPR_3coord: 605..661
e-value: 1.3E-4
score: 22.0
IPR002885Pentatricopeptide repeatPFAMPF01535PPRcoord: 207..228
e-value: 0.7
score: 10.3
coord: 352..374
e-value: 0.0039
score: 17.3
coord: 243..273
e-value: 0.67
score: 10.3
coord: 424..449
e-value: 0.036
score: 14.3
coord: 541..569
e-value: 0.86
score: 10.0
coord: 387..410
e-value: 0.9
score: 9.9
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 276..310
score: 10.029647
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 204..239
score: 9.065053
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 240..275
score: 11.32308
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 128..162
score: 12.123256
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 457..491
score: 13.044004
IPR002885Pentatricopeptide repeatPROSITEPS51375PPRcoord: 348..383
score: 10.566751
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 513..590
e-value: 4.4E-12
score: 48.1
coord: 591..665
e-value: 7.4E-14
score: 53.9
coord: 419..512
e-value: 7.4E-22
score: 80.2
coord: 293..418
e-value: 1.8E-26
score: 95.3
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10Tetratricopeptide repeat domaincoord: 197..288
e-value: 1.6E-18
score: 68.7
coord: 95..196
e-value: 1.9E-18
score: 68.4
NoneNo IPR availablePANTHERPTHR45613PENTATRICOPEPTIDE REPEAT-CONTAINING PROTEINcoord: 107..410
coord: 232..586
coord: 521..664

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_499contigScaffold_499:1018789..1022148 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastx: OGS1.0 vs UniRef902022-09-19
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft913_4a-0001EsuBft913_4a-0001Ectocarpus subulatus male Bft15bmRNAScaffold_499 1018735..1022738 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>EsuBft913_4 ID=EsuBft913_4|Name=EsuBft913_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=665bp
MIRTHVRVFQSRCCSRGATASQLIAAQREPRTTTTRAAPRTIAVDTLPTR
GISTAPRSLESETVARAAASTAIRPRGPLSPPRRLLRNRPAEDGKRFVRE
AQRLGGQGKWGRVMSLLRQAEGDGAVVNHIMYNAAIGALSKSGRWREATS
LLESMPEKGVAPDVVSYGAAMEACRAARGGRPDEAYGILSRMTAWTGGKS
VKPNRRCFNIVLAAFAKSGRSRRALSLVEVDMVNASVEPDLRTWSTLIDA
YRAAGESGRDAAELLGRMREAGVEPDVWCFNNCLNAASRRGEWELAFGLL
EDMGEAGVEPNCWSYSAAMKACVNAEEWTLVPALLRAMREAGSTAPPNVW
NFNICLDAYGKSGEWEKAVSLLRKDMPAAGVAPDVASYASAIDAAGKAGE
WDTALALWDEARAALPPSALNSHAYSIAIGVCGKAGLVDRALSLLSEWRA
APGLPPDLRPFNAAIDACARAGRWERALSLLREMEEAGLEPDVVSFTSAI
AAFRGGKAAAAAAGAGERELGLALGLLEEMKSRGLPPTSFSHSAAIKLCT
DANRHERALGLFEELKASGQAADEPAFTAIIDSCARHSGSSNGGGEGRWE
TAVGLLDEMEASGVAPSVAAFNGAIRACCNGGQWHLGSSLLRRMAAVDGV
DPNVSSMNALIRGLS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002885Pentatricopeptide_repeat
IPR011990TPR-like_helical_dom_sf