EsuBft864_3 (polypeptide) Ectocarpus subulatus male Bft15b

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	EsuBft864_3a-0001
Unique Name	EsuBft864_3
Type	polypeptide
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Sequence length	483

Homology

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BLAST of EsuBft864_3a-0001 vs. uniprot
Match: D8LRP1_ECTSI (Letm1 RBD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP1_ECTSI)

HSP 1 Score: 846 bits (2185), Expect = 5.260e-308
Identity = 444/483 (91.93%), Postives = 453/483 (93.79%), Query Frame = 0

Query:    1 MRLSEFLSVLNLAAVAQGGRGTVGWGSKSAAVMSDRRVFNDRHRQHQSRSAVAFFGRRPRTTTPRVTGSSEAESAVDALSDASGAGVKVVRGLPTAADTSAADSAGDSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFKARRHTSQDIRKRVKAGHVMTYAEHAHLERGAIDRRKLLQYLIAYAVSPKNFVYVVWYVPGLLPSTFVKPHTVRSKYHRLALERASATWDAVTGLEFRLLKAEEGFKGKRREEGSRQSKKMEKLERQREMVLDVLEAESKRQVFERFQDHMVVPAPASPDPENAAASNNKITKKSKKPKSQKLKLPSASKGVPNTYIKALGKGTGLSGWWHISPGFYVRYCLSERLRDLGRMDDVLRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTVFLPDRARLLGLGLNCLESARQGRTAELPRKALAVVGKGGAIP 483
            MRLSEFLSVLNLAAVAQGG GT GWGSKSAAV+SDRRVFNDRHRQ QSRSAVAFFGRRPRT+TPRVTGSSEA SAVDAL DASGAG   VRG P AADTS+     DSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFK    TSQDIRKRVKAGHVMTYAEHAHLERGA DRRKLLQYLIAYAVSP+NFVYVVWYVPGLLPSTFVKPHT+RSKYHRLALERASATWDAVTGLEFRLLKAEEGFKGK REEGSRQSKKMEKLERQREMVLDVLEA+SKRQVFERFQ+HMVV APASPDPEN AASNNK T KSKKPK QKLKLP ASKGVPN YIK LGKGTGLSGWWH+SPGFYVRYCLSERLRDLG+MDDVLRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTVFLPDRARLLGLGLNCLESARQGRTAELPRKALAV GKGGAIP
Sbjct:    1 MRLSEFLSVLNLAAVAQGGHGTAGWGSKSAAVVSDRRVFNDRHRQPQSRSAVAFFGRRPRTSTPRVTGSSEAGSAVDALPDASGAGANGVRGSPAAADTSSXXXXXDSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFK----TSQDIRKRVKAGHVMTYAEHAHLERGATDRRKLLQYLIAYAVSPQNFVYVVWYVPGLLPSTFVKPHTIRSKYHRLALERASATWDAVTGLEFRLLKAEEGFKGKPREEGSRQSKKMEKLERQREMVLDVLEADSKRQVFERFQEHMVVSAPASPDPENTAASNNKGTTKSKKPKPQKLKLPPASKGVPNAYIKTLGKGTGLSGWWHVSPGFYVRYCLSERLRDLGKMDDVLRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTVFLPDRARLLGLGLNCLESARQGRTAELPRKALAV-GKGGAIP 478

[Close]

BLAST of EsuBft864_3a-0001 vs. uniprot
Match: A0A6H5L818_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L818_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 5.300e-59
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 0

Query:  334 VPNTYIKALGKGTGLSGWWHISPGFYVRYCLSERLRDLGRMDDVLRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTV 441
            VPN YI+ALGKGTGLSGW HISPGFYVRYCLSERLRDLGRM ++LRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRK LG WLDLTSPEV+AGSKL PD++
Sbjct:   63 VPNAYIEALGKGTGLSGWCHISPGFYVRYCLSERLRDLGRMIEILRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKPLGGWLDLTSPEVSAGSKLDPDSL 170

[Close]

BLAST of EsuBft864_3a-0001 vs. uniprot
Match: D8LRP1_ECTSI (Letm1 RBD domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRP1_ECTSI)

HSP 1 Score: 848 bits (2192), Expect = 1.880e-308
Identity = 444/483 (91.93%), Postives = 453/483 (93.79%), Query Frame = 3

Query:   54 MRLSEFLSVLNLAAVAQGGRGTVGWGSKSAAVMSDRRVFNDRHRQHQSRSAVAFFGRRPRTTTPRVTGSSEAESAVDALSDASGAGVKVVRGLPTAADTSAADSAGDSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFKARRHTSQDIRKRVKAGHVMTYAEHAHLERGAIDRRKLLQYLIAYAVSPKNFVYVVWYVPGLLPSTFVKPHTVRSKYHRLALERASATWDAVTGLEFRLLKAEEGFKGKRREEGSRQSKKMEKLERQREMVLDVLEAESKRQVFERFQDHMVVPAPASPDPENAAASNNKITKKSKKPKSQKLKLPSASKGVPNTYIKALGKGTGLSGWWHISPGFYVRYCLSERLRDLGRMDDVLRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTVFLPDRARLLGLGLNCLESARQGRTAELPRKALAVVGKGGAIP 1502
            MRLSEFLSVLNLAAVAQGG GT GWGSKSAAV+SDRRVFNDRHRQ QSRSAVAFFGRRPRT+TPRVTGSSEA SAVDAL DASGAG   VRG P AADTS+     DSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFK    TSQDIRKRVKAGHVMTYAEHAHLERGA DRRKLLQYLIAYAVSP+NFVYVVWYVPGLLPSTFVKPHT+RSKYHRLALERASATWDAVTGLEFRLLKAEEGFKGK REEGSRQSKKMEKLERQREMVLDVLEA+SKRQVFERFQ+HMVV APASPDPEN AASNNK T KSKKPK QKLKLP ASKGVPN YIK LGKGTGLSGWWH+SPGFYVRYCLSERLRDLG+MDDVLRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTVFLPDRARLLGLGLNCLESARQGRTAELPRKALAV GKGGAIP
Sbjct:    1 MRLSEFLSVLNLAAVAQGGHGTAGWGSKSAAVVSDRRVFNDRHRQPQSRSAVAFFGRRPRTSTPRVTGSSEAGSAVDALPDASGAGANGVRGSPAAADTSSXXXXXDSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFK----TSQDIRKRVKAGHVMTYAEHAHLERGATDRRKLLQYLIAYAVSPQNFVYVVWYVPGLLPSTFVKPHTIRSKYHRLALERASATWDAVTGLEFRLLKAEEGFKGKPREEGSRQSKKMEKLERQREMVLDVLEADSKRQVFERFQEHMVVSAPASPDPENTAASNNKGTTKSKKPKPQKLKLPPASKGVPNAYIKTLGKGTGLSGWWHVSPGFYVRYCLSERLRDLGKMDDVLRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTVFLPDRARLLGLGLNCLESARQGRTAELPRKALAV-GKGGAIP 478

[Close]

BLAST of EsuBft864_3a-0001 vs. uniprot
Match: A0A6H5L818_9PHAE (LETM1 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L818_9PHAE)

HSP 1 Score: 201 bits (511), Expect = 1.220e-58
Identity = 96/108 (88.89%), Postives = 102/108 (94.44%), Query Frame = 3

Query: 1053 VPNTYIKALGKGTGLSGWWHISPGFYVRYCLSERLRDLGRMDDVLRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTV 1376
            VPN YI+ALGKGTGLSGW HISPGFYVRYCLSERLRDLGRM ++LRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRK LG WLDLTSPEV+AGSKL PD++
Sbjct:   63 VPNAYIEALGKGTGLSGWCHISPGFYVRYCLSERLRDLGRMIEILRTVSLESLSDSDLREACDARAINVGNRLGGDREPQDLRKPLGGWLDLTSPEVSAGSKLDPDSL 170

The following BLAST results are available for this feature:

BLAST of EsuBft864_3a-0001 vs. uniprot
BLAST of EsuBft864_3a-0001 vs. uniprot

BLAST of EsuBft864_3a-0001 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LRP1_ECTSI	5.260e-308	91.93	Letm1 RBD domain-containing protein n=2 Tax=Ectoca...	[more]
A0A6H5L818_9PHAE	5.300e-59	88.89	LETM1 domain-containing protein n=1 Tax=Ectocarpus...	[more]

BLAST of EsuBft864_3a-0001 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
D8LRP1_ECTSI	1.880e-308	91.93	Letm1 RBD domain-containing protein n=2 Tax=Ectoca...	[more]
A0A6H5L818_9PHAE	1.220e-58	88.89	LETM1 domain-containing protein n=1 Tax=Ectocarpus...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 263..283
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 296..329
IPR011685	LETM1-like	PFAM	PF07766	LETM1	coord: 124..427 e-value: 1.1E-17 score: 64.3
IPR033122	LETM1, ribosome-binding domain	PROSITE	PS51758	LETM1_RBD	coord: 253..483 score: 9.670462

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Scaffold_340	contig	Scaffold_340:47308..51446 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus subulatus male Bft15b	2020-06-19

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
EsuBft864_3a-0001	EsuBft864_3a-0001	Ectocarpus subulatus male Bft15b	mRNA	Scaffold_340 47252..51499 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>EsuBft864_3 ID=EsuBft864_3|Name=EsuBft864_3a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=483bp
MRLSEFLSVLNLAAVAQGGRGTVGWGSKSAAVMSDRRVFNDRHRQHQSRS
AVAFFGRRPRTTTPRVTGSSEAESAVDALSDASGAGVKVVRGLPTAADTS
AADSAGDSAAAPRVSAAQGIVNTFRDFWGHARDGTFALWGNFKARRHTSQ
DIRKRVKAGHVMTYAEHAHLERGAIDRRKLLQYLIAYAVSPKNFVYVVWY
VPGLLPSTFVKPHTVRSKYHRLALERASATWDAVTGLEFRLLKAEEGFKG
KRREEGSRQSKKMEKLERQREMVLDVLEAESKRQVFERFQDHMVVPAPAS
PDPENAAASNNKITKKSKKPKSQKLKLPSASKGVPNTYIKALGKGTGLSG
WWHISPGFYVRYCLSERLRDLGRMDDVLRTVSLESLSDSDLREACDARAI
NVGNRLGGDREPQDLRKSLGEWLDLTSPEVAAGSKLGPDTVFLPDRARLL
GLGLNCLESARQGRTAELPRKALAVVGKGGAIP

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR011685	LETM1-like
IPR033122	LETM1_RBD