EsuBft1068_5 (polypeptide) Ectocarpus subulatus male Bft15b

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	EsuBft1068_5a-0001
Unique Name	EsuBft1068_5
Type	polypeptide
Organism	Ectocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Sequence length	352

Homology

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BLAST of EsuBft1068_5a-0001 vs. uniprot
Match: A0A6H5JBM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBM9_9PHAE)

HSP 1 Score: 415 bits (1066), Expect = 5.960e-142
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 0

Query:    1 MASCHAARAQQTTRVSDRVQSCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXXGPVLHVRWAAEDPNPRAVVQARAGHAQTLLAAQVANGALPSDVAGRLPGADRALLRKAGMDPRNPSQADLELLNTQRQYLAVQGHPEANGEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHTSLSDDPGDRHASTDAPSLQSTHGGARQGYPAQPLGVSSSTPPGSSVAQRQSFERLPPAGEAGVXXXXXXXXXXXXXXGSLSLLGGYGSGESD 352
            MASCHAARAQQTTRVSDRVQSCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXXGPVLHVRWAAEDPNPRAVVQARAGHAQTLLAAQVANGALPSDVAGRLPGADRALLRKAGMDPRNPSQADLELLNTQRQYLAVQGHPEANGEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHTSLSDDPGDRHASTDAPSLQSTHGGARQGYPAQPLGVSSSTPPGSSVAQRQSFERLPPAGEAGVXXXXXXXXXXXXXXGSLSLLGGYGSGESD
Sbjct:    1 MASCHAARAQQTTRVSDRVQSCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXXGPVLHVRWAAEDPNPRAVVQARAGHAQTLLAAQVANGALPSDVAGRLPGADRALLRKAGMDPRNPSQADLELLNTQRQYLAVQGHPEANGEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHTSLSDDPGDRHASTDAPSLQSTHGGARQGYPAQPLGVSSSTPPGSSVAQRQSFERLPPAGEAGVXXXXXXXXXXXXXXGSLSLLGGYGSGESD 352

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BLAST of EsuBft1068_5a-0001 vs. uniprot
Match: D8LJP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP7_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 7.560e-104
Identity = 292/363 (80.44%), Postives = 296/363 (81.54%), Query Frame = 0

Query:   21 SCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXX-GPVLHVRWAAEDPNPRAVVQARAGHAQTLLAAQVANGALPSDVAGRLPGADRALLRKAGMDPRNPSQADLELLNTQRQYLAVQGHPEANGEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR------------------------------HTSLSDDPGDRHASTDAPSLQSTHGGARQGYPAQPLGVSSSTPPGSSVAQRQSFERLPPAGEAGVXXXXXXXXXXXXXXGSLSLLGGYGSGESD 352
            SCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXX G VLHVRWAAEDPNPRAV+QARAGHAQTLLAAQVA GALPSDVAGRLPGADRALLRKAGMDPRNPSQ DLE  NTQRQYLAVQGH  ANGEY              XXXXXXXXXXXXXXXXXX XX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               HT L++DPGDRHASTDAPSL STHGG RQ YPAQPLGVSSSTPPGSSVA+RQSFERLPPAGEA     XXXXXXXXXXXGSLSLLGGYGSGESD
Sbjct:  176 SCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXXXGAVLHVRWAAEDPNPRAVIQARAGHAQTLLAAQVAAGALPSDVAGRLPGADRALLRKAGMDPRNPSQVDLEFQNTQRQYLAVQGHRGANGEYPNTDHQYPPNAYHQXXXXXXXXXXXXXXXXXXTXXQYPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPXXXXXXXXXXXXXXXXXXXHTRLTEDPGDRHASTDAPSLHSTHGGGRQSYPAQPLGVSSSTPPGSSVAKRQSFERLPPAGEAAAGVGXXXXXXXXXXXGSLSLLGGYGSGESD 538

[Close]

BLAST of EsuBft1068_5a-0001 vs. uniprot
Match: A0A6H5JBM9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBM9_9PHAE)

HSP 1 Score: 416 bits (1068), Expect = 9.210e-141
Identity = 352/352 (100.00%), Postives = 352/352 (100.00%), Query Frame = 1

Query:    1 MASCHAARAQQTTRVSDRVQSCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXXGPVLHVRWAAEDPNPRAVVQARAGHAQTLLAAQVANGALPSDVAGRLPGADRALLRKAGMDPRNPSQADLELLNTQRQYLAVQGHPEANGEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHTSLSDDPGDRHASTDAPSLQSTHGGARQGYPAQPLGVSSSTPPGSSVAQRQSFERLPPAGEAGVXXXXXXXXXXXXXXGSLSLLGGYGSGESD 1056
            MASCHAARAQQTTRVSDRVQSCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXXGPVLHVRWAAEDPNPRAVVQARAGHAQTLLAAQVANGALPSDVAGRLPGADRALLRKAGMDPRNPSQADLELLNTQRQYLAVQGHPEANGEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHTSLSDDPGDRHASTDAPSLQSTHGGARQGYPAQPLGVSSSTPPGSSVAQRQSFERLPPAGEAGVXXXXXXXXXXXXXXGSLSLLGGYGSGESD
Sbjct:    1 MASCHAARAQQTTRVSDRVQSCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXXGPVLHVRWAAEDPNPRAVVQARAGHAQTLLAAQVANGALPSDVAGRLPGADRALLRKAGMDPRNPSQADLELLNTQRQYLAVQGHPEANGEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRHTSLSDDPGDRHASTDAPSLQSTHGGARQGYPAQPLGVSSSTPPGSSVAQRQSFERLPPAGEAGVXXXXXXXXXXXXXXGSLSLLGGYGSGESD 352

[Close]

BLAST of EsuBft1068_5a-0001 vs. uniprot
Match: D8LJP7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJP7_ECTSI)

HSP 1 Score: 325 bits (833), Expect = 9.520e-103
Identity = 292/363 (80.44%), Postives = 296/363 (81.54%), Query Frame = 1

Query:   61 SCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXX-GPVLHVRWAAEDPNPRAVVQARAGHAQTLLAAQVANGALPSDVAGRLPGADRALLRKAGMDPRNPSQADLELLNTQRQYLAVQGHPEANGEYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXR------------------------------HTSLSDDPGDRHASTDAPSLQSTHGGARQGYPAQPLGVSSSTPPGSSVAQRQSFERLPPAGEAGVXXXXXXXXXXXXXXGSLSLLGGYGSGESD 1056
            SCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXX G VLHVRWAAEDPNPRAV+QARAGHAQTLLAAQVA GALPSDVAGRLPGADRALLRKAGMDPRNPSQ DLE  NTQRQYLAVQGH  ANGEY              XXXXXXXXXXXXXXXXXX XX    XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX                               HT L++DPGDRHASTDAPSL STHGG RQ YPAQPLGVSSSTPPGSSVA+RQSFERLPPAGEA     XXXXXXXXXXXGSLSLLGGYGSGESD
Sbjct:  176 SCAFVQYAHRASAEFAKEAMSNQSLLTAEKLASNRAAGERRREKSTGPSRXXXXXXXXXXXXXXXXXXXXGAVLHVRWAAEDPNPRAVIQARAGHAQTLLAAQVAAGALPSDVAGRLPGADRALLRKAGMDPRNPSQVDLEFQNTQRQYLAVQGHRGANGEYPNTDHQYPPNAYHQXXXXXXXXXXXXXXXXXXTXXQYPNXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXYLPXXXXXXXXXXXXXXXXXXXHTRLTEDPGDRHASTDAPSLHSTHGGGRQSYPAQPLGVSSSTPPGSSVAKRQSFERLPPAGEAAAGVGXXXXXXXXXXXGSLSLLGGYGSGESD 538

The following BLAST results are available for this feature:

BLAST of EsuBft1068_5a-0001 vs. uniprot
BLAST of EsuBft1068_5a-0001 vs. uniprot

BLAST of EsuBft1068_5a-0001 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JBM9_9PHAE	5.960e-142	100.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LJP7_ECTSI	7.560e-104	80.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

BLAST of EsuBft1068_5a-0001 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A6H5JBM9_9PHAE	9.210e-141	100.00	Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA...	[more]
D8LJP7_ECTSI	9.520e-103	80.44	Uncharacterized protein n=1 Tax=Ectocarpus silicul...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 10..111 e-value: 3.0E-8 score: 35.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 198..259
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 273..311
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 171..352
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 40..110
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..20
IPR039171	Pre-mRNA-splicing factor Cwc2/Slt11	PANTHER	PTHR14089	PRE-MRNA-SPLICING FACTOR RBM22	coord: 21..231
IPR039173	Pre-mRNA-splicing factor Cwc2	PANTHER	PTHR14089:SF2	TESTIS-EXPRESSED GENE 16	coord: 21..231
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 15..88

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Scaffold_451	contig	Scaffold_451:1517580..1520303 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0	2022-09-29
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
Diamond blastp: OGS1.0 vs UniRef90	2022-09-16
OGS1.0 of Ectocarpus subulatus male Bft15b	2020-06-19

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
EsuBft1068_5a-0001	EsuBft1068_5a-0001	Ectocarpus subulatus male Bft15b	mRNA	Scaffold_451 1517300..1520303 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>EsuBft1068_5 ID=EsuBft1068_5|Name=EsuBft1068_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=352bp
MASCHAARAQQTTRVSDRVQSCAFVQYAHRASAEFAKEAMSNQSLLTAEK
LASNRAAGERRREKSTGPSRPPSSASSGSGSGGGDGGDDGPVLHVRWAAE
DPNPRAVVQARAGHAQTLLAAQVANGALPSDVAGRLPGADRALLRKAGMD
PRNPSQADLELLNTQRQYLAVQGHPEANGEYPNTDHQYPPNMDHHYPNTD
HQYPNTDHQYPSTDHQYPITDHQYPSTDHQYPSTDHQYPITDHQYPKMGN
QNPSAGHRHTSLSDDPGDRHASTDAPSLQSTHGGARQGYPAQPLGVSSST
PPGSSVAQRQSFERLPPAGEAGVGVGRGAAAGGAGAGGSLSLLGGYGSGE
SD

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR012677	Nucleotide-bd_a/b_plait_sf
IPR039171	Cwc2/Slt11
IPR039173	Cwc2
IPR035979	RBD_domain_sf