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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name | Value |
ProteomeId | EsuBft999_10 |
Owner | apollo_admin@sb-roscoff.fr |
Nb exon | 5 |
Length | 227 |
Hectar predicted targeting category | other localisation |
Date last modified | 2016-06-13 |
Date creation | 2016-06-13 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft999_10a-0001 ID=EsuBft999_10a-0001|Name=EsuBft999_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2272bp|location=Sequence derived from alignment at Scaffold_463:10300..14895+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTCGTAGCAGCGCTGAAGCAATGCGTAGGCTGGAAAATCCTCACACCCAT GCCTCGTCTTATGCTGCGAGCTCGACGATGGAGGGCGGCCCTGAAAACCT TATGCACAACACGAATGCGGAAGAATCTGATTTCTATCCATTCCGCACGA AGGAACAGCAGCTGATATGGATATGGCAGCACACGCACCAGATTTCGCAA AAAGCCTTAGGCGGGCTGCTGGACATACTCCTTCTCGAGGACGAGGGCAC CGGTTTCGACGTGAGGGGACTGGAACGTGTTAACGCTGCGCACTTCAACA ACCGCATGCGGCAATACCTTCCTCTTCTACGGGTTCTCGTGCGAAATGTC CCGTCAACACAAGAAGGGAAGAGCTCGGCGGTGGTGTATGACGTACCTGT GAACCTGCTTCTCGCTCGCGACATGAAGCTAGTCTCGGAGACGGCACTCT CAGAAACCTACGCGGCGGGGAAAATTTTGCGCGGAGAGGAGGCCGCCGCC AACTCGTTGACGAACGACCATGTCAATTGTATCCCGACCAAGCTGGTCGA CAACGTGAGGGAGTCCAACATGAACGGTACGCTGTCGAGTACGTCCCCAT TCATGGGGCTTGATGGCATACAGAGCAGTGTTTGTGGGAGAAAAGTGTAC GTACACGACATTTGCATTTGCGAAATCGCTGGCACGCCTTCTGCCTGTCG TCTCCTCGAGATCTTCTGGGACACTGCAAGCGGCGGAGAAGTTGCAACTG TTAGAGGGTTTCGGCCAGTAGCGGAGGTGCGAAATGTGGGGCAGGCGGAG ATGCGAGGAAGACTTGTGCGAGTCTGGGAAGACTGTACTGCTGGAGCGGA AACACAGCTCAATGTTGCCGGCGTCCTGGGCCTGGCGGAGATCTACACGG CCGACGAGATGGAAGCTGACAAGCACGATGGTGAGTGGGACCAAGGTGAG GACTCGACGCGGAAGTACGAGGTGACCCACGCGCCTTGGTGCAAGGAAAG AACCTCTGAAGACCCACTGTTCGTCTTGAGGAGGGAAGGCTTCCATCTCA ACAACGACAACCTCGTTTTTATTTCGGCCCCTATCGCTTGCTTCAACGAC GCCTTCAACTGCTTTGGCATGGGAAACAAGAAGTACGAGGTGACCCACGC GCCTTGGTGCAAGGAGGGACCCTCTGAAGACCCACTGTTCGTCTTGAGGA GGGAAGGCTTTCATCTCAACAACGATAACCTCGTTTTTATTTCGGCCCCT GTCGCTTGCTACAACGACGCCTTCAACTGCTTTGGCATGGGAAACAAGCA TTCCGTAGGTGGCACATACTTCGGTTGGCCGTGGAGGAGCCAGGCGGTGC AAAGACTGAGGCGACAGACGCACGTCGGAACCCTTGCTAGCACCGGAGCT TCTTGCCAAGGCGAGATCGGTCTTCAGTGTGAGATCCTTGGATTGCTGCA GCGGGGGTGCTTGGGAGAATGCATGCTCAGGGACGACGACGGGGCAATAT CGAATCATGAGGTGCGGCCAATTTGTAGATGCACCTTCATCAGCATCGGG CTAATGCACTCCACCGTCCTACCNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNACGTTGAACG TGCCGAACGATAGGTCGCCCTCTCGTGCCTTCTTCTTCGCAGCCGCCTTG ACGGCCGCTGCGGTCTCGTGTCTCTCTCGGTCCACCTCGCGTTGCCGGTG TCCTTTCTTCCGTATTTTCCGAGCGGCGAGTTTCCTCGCATCAATCCATC CCTGCAGAGCTCGGTTTTTGCCTGTGGTGTTTTGGCGAGGAGGGTGCAGC ACTCCCTCCCCGCGGTGCCCGCGGTTGTCTCCCTTCTCCCGCGAGCGGTG CTTACTGACGTGGTGTTTACGAATCTCTCTGCTCCTCCAGCTTCGTGGGC CACGCTTTCCGCGACGGTGGTTGCCAGGTGCAGTTTGCCGCTTTGCACTA CTGCCGCGGGAACAGTGTCCATACACACCTCTCGCCACTTCCACCGTCCG TGCATCCTCACCGCCACGCTGAGCCAGCGCGGCGGTGAGTTGAACCTTGG GACACCACCCGCCTACTATCTGTTGTGGCCTGGTTCGCCCGCGAGGGACT GACTAGGTCGATTGCGGCCCCG back to topprotein sequence of EsuBft999_10a-0001 >EsuBft999_10 ID=EsuBft999_10|Name=EsuBft999_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=573bp
MRRLENPHTHASSYAASSTMEGGPENLMHNTNAEESDFYPFRTKEQQLIW IWQHTHQISQKALGGLLDILLLEDEGTGFDVRGLERVNAAHFNNRMRQYL PLLRVLVRNVPSTQEGKSSAVVYDVPVNLLLARDMKLVSETALSETYAAG KILRGEEAAANSLTNDHVNCIPTKLVDNVRESNMNGTLSSTSPFMGLDGI QSSVCGRKVYVHDICICEIAGTPSACRLLEIFWDTASGGEVATVRGFRPV AEVRNVGQAEMRGRLVRVWEDCTAGAETQLNVAGVLGLAEIYTADEMEAD KHDGEWDQGEDSTRKYEVTHAPWCKERTSEDPLFVLRREGFHLNNDNLVF ISAPIACFNDAFNCFGMGNKKYEVTHAPWCKEGPSEDPLFVLRREGFHLN NDNLVFISAPVACYNDAFNCFGMGNKHSVGGTYFGWPWRSQAVQRLRRQT HVGTLASTGASCQGEIGLQCEILGLLQRGCLGECMLRDDDGAISNHEVRP ICRCTFISIGLMHSTVLPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXX back to topmRNA from alignment at Scaffold_463:10300..14895+ Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft999_10a-0001 ID=EsuBft999_10a-0001|Name=EsuBft999_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=4596bp|location=Sequence derived from alignment at Scaffold_463:10300..14895+ (Ectocarpus subulatus male Bft15b) GTCGTAGCAGCGCTGAAGCAATGCGTAGGCTGGAAAATCCTCACACCCAT
GCCTCGTCTTATGCTGCGAGCTCGACGATGGAGGGCGGCCCTGAAAACCT
TATGCACAACACGAATGCGGAAGAATCTGATTTCTATCCATTCCGCACGA
AGGAACAGCAGCTGATATGGATATGGCAGCACACGCACCAGATTTCGCAA
AAAGCCTTAGGCGGGCTGCTGGACATACTCCTTCTCGAGGACGAGGGCAC
CGGTTTCGACGTGAGGGGACTGGAACGTGTTAACGCTGCGCACTTCAACA
ACCGCATGCGGCAATACCTTCCTCTTCTACGGGTTCTCGTGCGAAATGTC
CCGTCAACACAAGAAGGGAAGAGCTCGGCGGTGGTGTATGACGTACCTGT
GAACCTGCTTCTCGCTCGCGACATGAAGCTAGTCTCGGAGACGGCACTCT
CAGAAACCTACGCGGCGGGGAAAATTTTGCGCGGAGAGGAGGCCGCCGCC
AACTCGTTGACGAACGACCATGTCAATTGTATCCCGACCAAGCTGGTCGA
CAACGTGAGGGAGTCCAACATGAACGGTACGCTGTCGAGTACGTCCCCAT
TCATGGGGCTTGATGGCATACAGAGCAGTGTTTGTGGGAGAAAAGTGTAC
GTACACGACATTTGCATTTGCGAAATCGCTGGCACGCCTTCTGCCTGTCG
TCTCCTCGAGATCTTCTGGGACACTGCAAGCGGCGGAGAAGTTGCAACTG
TTAGAGGGTTTCGGCCAGTAGCGGAGGTGCGAAATGTGGGGCAGGCGGAG
ATGCGAGGAAGACTTGTGCGAGTCTGGGAAGACTGTACTGCTGGAGCGGA
AACACAGCTCAATGTTGCCGGCGTCCTGGGCCTGGCGGAGATCTACACGG
CCGACGAGATGGAAGCTGACAAGCACGATGGTGAGTGGGACCAAGGTGTT
CGGTGCATTCATGGGATCGGTTTTTGGGGGTAGGGTTCGTGGTCCAAACG
GCGCCGTTCCGAGGAGGACTCGACGCGGAAGTACGAGGTGACCCACGCGC
CTTGGTGCAAGGAAAGAACCTCTGAAGACCCACTGTTCGTCTTGAGGAGG
GAAGGCTTCCATCTCAACAACGACAACCTCGTTTTTATTTCGGCCCCTAT
CGCTTGCTTCAACGACGCCTTCAACTGCTTTGGCATGGGAAACAAGGTAC
GCTANAAAACGGCGCCGTTCCGAGGAGGACTCGACGCAGAAGTACGAGGT
GACCCACGCGCCTTGGTGCAAGGAGGGACCCTCTGAAGACCCACTGTTCG
TCTTGAGGAGGGAAGGCTTTCATCTCAACAACGATAACCTCGTTTTTATT
TCGGCCCCTGTCGCTTGCTACAACGACGCCTTCAACTGCTTTGGCATGGG
AAACAAGGTACGCTGCCTCCGCATTGTGATCGACCAGGATATTGTGGCAC
TGTCATTCATGTGTTCCCCTGCCTCCACCCCTCCCGTCAAGCAATACACC
TTTGTAGATGTACCTCGTAAGTGTTGCCACATACAGCATTGTCTTCGGCC
CCTTCAGCAGTTGGGTCTACATTGTCGGAGCTACTAGGCGCAGCACTCAC
AGGCACACGCGCACGCCGTGCCTAGCGTGCCGCCACCTCTTCGGTCACAG
GTCATGCTCGGGGCACGCCTCGTCTTGTCGAACCACACACACTTGCCACC
TCTCTTGTGATTCATGCATTGTCGTTGATTTGTCGGCTTGTCAGCATTCC
GTAGGTGGCACATACTTCGGTTGGCCGTGGAGGAGCCAGGCGGTGCAAAG
ACTGAGGCGACAGACGCACGTCGGAACCCTTGCTAGCACCGGAGCTTCTT
GCCAAGGCGAGATCGGTCTTCAGTGTGAGATCCTTGGATTGCTGCAGCGG
GGGTGCTTGGGAGAATGCATGCTCAGGGACGACGACGGGGCAATATCGAA
TCATGAGGTATGCTGACAAGCCCTCGGCAATTTTGGGATAACACGCGTGG
TGTAGGTAGTGGGAGGGGGGGGGGTTGTACTCATACTCATAGTCGTGCAT
GCCGTAGTCGTTAGACCATTGACCTCGCATCCCTACAAAGCCGGGACGGA
GCACGCCGGGTTCTCACCGGACCAGGCTCTCACATCACCAAGCGCGAAGC
GCCGTGAGATATTCGGCGAGTCGCATGAAGGGTGCGCTGCATCCTGCTAA
GGGTTTTCGGCATCTTGTGCTTACTTCCTTGCGTACGGATGACAGCTGCG
TATGAATTAATTTACTTTCTGGTGCTTTCACTTCCAGAGACAGTTGTAAG
CACTGTGTAACTGCCTCGAGGGTGCTTGACCATTTCAACACAACGTGGTG
CGATCATCCCCCTTGCGCGGAGTGAGGGTTCTCGACCCCGCACAACATGA
TCTAAAAAACGGTAACCTGGTTGCGGAGTTCTGCCCCCTCCCTCGCAGTA
GTGGCTCAGTCGTGTAGCGACGACCTTAAGCATCACCTTGCCGGCGTGTG
CGACGAGAGAGATGCCCCGGTAGTTGCCGCACTCCATCGTGTCCCCCTTC
TTGAACAGCACTTTGATGGTGGCATCCTTCCACTNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCAGAA
GGAGTCCTTGGCGTTAACATCACCGCCCGCGGTGGTGCGGACAGTTTCCG
TGGGGGCGTACCCCACCACGAAAGTTACTCCGCAGGTGCGGCCAATTTGT
AGATGCACCTTCATCAGCATCGGGCTAATGCACTCCACCGTCCTACCNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNACGTTGAACGTGCCGAACGATAGGTCGCCCTCTCGT
GCCTTCTTCTTCGCAGCCGCCTTGACGGCCGCTGCGGTCTCGTGTCTCTC
TCGGTCCACCTCGCGTTGCCGGTGTCCTTTCTTCCGTATTTTCCGAGCGG
CGAGTTTCCTCGCATCAATCCATCCCTGCAGAGCTCGGTTTTTGCCTGTG
GTGTTTTGGCGAGGAGGGTGCAGCACTCCCTCCCCGCGGTGCCCGCGGTT
GTCTCCCTTCTCCCGCGAGCGGTGCTTACTGACGTGGTGTTTACGAATCT
CTCTGCTCCTCCAGCTTCGTGGGCCACGCTTTCCGCGACGGTGGTTGCCA
GGTGCAGTTTGCCGCTTTGCACTACTGCCGCGGGAACAGTGTCCATACAC
ACCTCTCGCCACTTCCACCGTCCGTGCATCCTCACCGCCACGCTGAGCCA
GCGCGGCGGTGAGTTGAACCTTGGGACACCACCCGCCTACTATCTGTTGT
GGCCTGGTTCGCCCGCGAGGGACTGACTAGGTCGATTGCGGCCCCG back to topCoding sequence (CDS) from alignment at Scaffold_463:10300..14895+ >EsuBft999_10a-0001 ID=EsuBft999_10a-0001|Name=EsuBft999_10a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1719bp|location=Sequence derived from alignment at Scaffold_463:10300..14895+ (Ectocarpus subulatus male Bft15b) ATGCGTAGGCTGGAAAATCCTCACACCCATGCCTCGTCTTATGCTGCGAG CTCGACGATGGAGGGCGGCCCTGAAAACCTTATGCACAACACGAATGCGG AAGAATCTGATTTCTATCCATTCCGCACGAAGGAACAGCAGCTGATATGG ATATGGCAGCACACGCACCAGATTTCGCAAAAAGCCTTAGGCGGGCTGCT GGACATACTCCTTCTCGAGGACGAGGGCACCGGTTTCGACGTGAGGGGAC TGGAACGTGTTAACGCTGCGCACTTCAACAACCGCATGCGGCAATACCTT CCTCTTCTACGGGTTCTCGTGCGAAATGTCCCGTCAACACAAGAAGGGAA GAGCTCGGCGGTGGTGTATGACGTACCTGTGAACCTGCTTCTCGCTCGCG ACATGAAGCTAGTCTCGGAGACGGCACTCTCAGAAACCTACGCGGCGGGG AAAATTTTGCGCGGAGAGGAGGCCGCCGCCAACTCGTTGACGAACGACCA TGTCAATTGTATCCCGACCAAGCTGGTCGACAACGTGAGGGAGTCCAACA TGAACGGTACGCTGTCGAGTACGTCCCCATTCATGGGGCTTGATGGCATA CAGAGCAGTGTTTGTGGGAGAAAAGTGTACGTACACGACATTTGCATTTG CGAAATCGCTGGCACGCCTTCTGCCTGTCGTCTCCTCGAGATCTTCTGGG ACACTGCAAGCGGCGGAGAAGTTGCAACTGTTAGAGGGTTTCGGCCAGTA GCGGAGGTGCGAAATGTGGGGCAGGCGGAGATGCGAGGAAGACTTGTGCG AGTCTGGGAAGACTGTACTGCTGGAGCGGAAACACAGCTCAATGTTGCCG GCGTCCTGGGCCTGGCGGAGATCTACACGGCCGACGAGATGGAAGCTGAC AAGCACGATGGTGAGTGGGACCAAGGTGAGGACTCGACGCGGAAGTACGA GGTGACCCACGCGCCTTGGTGCAAGGAAAGAACCTCTGAAGACCCACTGT TCGTCTTGAGGAGGGAAGGCTTCCATCTCAACAACGACAACCTCGTTTTT ATTTCGGCCCCTATCGCTTGCTTCAACGACGCCTTCAACTGCTTTGGCAT GGGAAACAAGAAGTACGAGGTGACCCACGCGCCTTGGTGCAAGGAGGGAC CCTCTGAAGACCCACTGTTCGTCTTGAGGAGGGAAGGCTTTCATCTCAAC AACGATAACCTCGTTTTTATTTCGGCCCCTGTCGCTTGCTACAACGACGC CTTCAACTGCTTTGGCATGGGAAACAAGCATTCCGTAGGTGGCACATACT TCGGTTGGCCGTGGAGGAGCCAGGCGGTGCAAAGACTGAGGCGACAGACG CACGTCGGAACCCTTGCTAGCACCGGAGCTTCTTGCCAAGGCGAGATCGG TCTTCAGTGTGAGATCCTTGGATTGCTGCAGCGGGGGTGCTTGGGAGAAT GCATGCTCAGGGACGACGACGGGGCAATATCGAATCATGAGGTGCGGCCA ATTTGTAGATGCACCTTCATCAGCATCGGGCTAATGCACTCCACCGTCCT ACCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNN back to top
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