EsuBft992_4a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NameEsuBft992_4a-0001
Unique NameEsuBft992_4a-0001
TypemRNA
OrganismEctocarpus subulatus male Bft15b (Ectocarpus subulatus male Bft15b)
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
Scaffold_539contigScaffold_539:23852..33540 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
OGS1.0 of Ectocarpus subulatus male Bft15b2020-06-19
Properties
Property NameValue
Seed ortholog2880.D8LJA1
ProteomeIdEsuBft992_4
Protein domainsSSF55681
Protein domainsIPR005147
Protein domainsIPR020825
Protein domainsPTHR10947
Protein domainsIPR004531
Protein domainsIPR009061
Protein domainsG3DSA
Protein domainsIPR005146
Ownerapollo_admin@sb-roscoff.fr
Noteprobable phenylalanine--trna ligase beta subunit os:drosophila melanogaster gn:cg5706 pe:2 sv:1 [Automatic annotation]
Nb exon13
Max annot lvl2759|Eukaryota
Length2658
Hectar predicted targeting categoryother localisation
Evalue0.0
EggNOG OGsCOG0072@1|root,KOG2472@2759|Eukaryota
Ec32 ortholog descriptionDNA binding domain, putative
Ec32 orthologEc-02_005310.1
Date last modified2016-06-14
Date creation2016-06-14
KEGG rclassRC00055,RC00523
KEGG koko:K01890
KEGG ReactionR03660
KEGG Pathwayko00970,map00970
KEGG ModuleM00359,M00360
EC6.1.1.20
Descriptionphenylalanine-tRNA ligase activity
COG categoryJ
BRITEko00000,ko00001,ko00002,ko01000,ko01007,ko03016
Cross References
External references for this mRNA
DatabaseAccession
GO0005524
GO0003723
GO0006432
GO0004826
GO0005829
EC6.1.1.20
GO0000287
GO0003333
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameSpeciesTypePosition
EsuBft992_4aEsuBft992_4aEctocarpus subulatus male Bft15bgeneScaffold_539 23852..33540 -


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft992_4a-0001-exonagat-exon-35247Ectocarpus subulatus male Bft15bexonScaffold_539 23852..24658 -
EsuBft992_4a-0001-exonagat-exon-35254Ectocarpus subulatus male Bft15bexonScaffold_539 25184..25302 -
EsuBft992_4a-0001-exonagat-exon-35253Ectocarpus subulatus male Bft15bexonScaffold_539 25709..25876 -
EsuBft992_4a-0001-exonagat-exon-35248Ectocarpus subulatus male Bft15bexonScaffold_539 26308..26433 -
EsuBft992_4a-0001-exonagat-exon-35251Ectocarpus subulatus male Bft15bexonScaffold_539 26753..26900 -
EsuBft992_4a-0001-exonagat-exon-35246Ectocarpus subulatus male Bft15bexonScaffold_539 27352..27533 -
EsuBft992_4a-0001-exonagat-exon-35245Ectocarpus subulatus male Bft15bexonScaffold_539 27987..28127 -
EsuBft992_4a-0001-exonEsuBft992_4a-0001-exonEctocarpus subulatus male Bft15bexonScaffold_539 28720..28893 -
EsuBft992_4a-0001-exonagat-exon-35255Ectocarpus subulatus male Bft15bexonScaffold_539 29188..29283 -
EsuBft992_4a-0001-exonagat-exon-35257Ectocarpus subulatus male Bft15bexonScaffold_539 29905..30048 -
EsuBft992_4a-0001-exonagat-exon-35249Ectocarpus subulatus male Bft15bexonScaffold_539 30648..30820 -
EsuBft992_4a-0001-exonagat-exon-35256Ectocarpus subulatus male Bft15bexonScaffold_539 31689..31815 -
EsuBft992_4a-0001-exonagat-exon-35252Ectocarpus subulatus male Bft15bexonScaffold_539 32956..33175 -
EsuBft992_4a-0001-exonagat-exon-35250Ectocarpus subulatus male Bft15bexonScaffold_539 33508..33540 -


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft992_4a-0001-exonagat-three_prime_utr-23857Ectocarpus subulatus male Bft15bthree_prime_UTRScaffold_539 23852..24489 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft992_4a-0001-cdsEsuBft992_4a-0001-cdsEctocarpus subulatus male Bft15bCDSScaffold_539 24490..24658 -


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft992_4a-0001-exonagat-five_prime_utr-15560Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_539 33106..33175 -
EsuBft992_4a-0001-exonagat-five_prime_utr-15561Ectocarpus subulatus male Bft15bfive_prime_UTRScaffold_539 33508..33540 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
EsuBft992_4a-0001EsuBft992_4Ectocarpus subulatus male Bft15bpolypeptideScaffold_539 24490..33105 -


Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft992_4a-0001 ID=EsuBft992_4a-0001|Name=EsuBft992_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2658bp|location=Sequence derived from alignment at Scaffold_539:23852..33540- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
AACGAGCAGCAAAGCCTCCACGTTCCCGATACGCGCAAGGGGGGGCTGTG
GGCCGCGCTTCCAGGCGGAGACAGGCTGATCGTGGGGATCGCTAGCCACC
AGCATGCCTACGCTGGGAGTGAACAGGGATGACCTCTTCGAGGCCCTTGG
TCACGTCTACACGGAGAAAGAGTTCGACGAGCTCTGCTTCGAGTTCGGCA
TCGAGCTGGACGAAGTGACCTCGGAAGCGATCGAGTTGGAGAAGCAGTCG
CAGGGTGGAGGTAGAGCAGGAGGAGCGGGAGCAGCCTCGACCGATATCGT
GTACAAGATCGACATCCCGGCCAACCGGTACGATCTCCTGTGCATCGAAG
GGCTTGCCAGGGCGCTAAGAGTCTTCTTGGGCAAAGAGGACTCGCCCGTC
TTCCGCACCGTTGAGCCTGCCGGGGGCGCGGGCGCGCGTCAAAAGATGAC
GGTTGGGTCCGGGGCGGCCAAGATCCGTCCGTACGTTGTGTGCGCCGTGC
TTCGAGGGGTGACTTTCAACGCCAAAAGCTACAAGAGCTTCATGGATTTG
CAGGACAAGCTGCACCAGAACATCTGCCGACGCCGCACCCTCGTCGCTAT
CGGGGCGCACGACCTCAACACGGTCACGGGGCCTTTCCGCTACGACGCCG
TTCCTCCTTCGGACATCAACTTCGTGCCACTCACGCCCAGCGACCAGGGG
ACGTTCAACGCCAAGGCGCTGTTGGACCTATACAACACGGACCCTTCCGT
GAAGCACCTCAAGCCCTACACACCCATCATCTACGAAAGCGAGGTGTACC
CTGTCATAAAGGACGCCAACGGGGACGTCTTGTCGCTGCCCCCGGTCATC
AACGGTCACCTGAGCCGCATCCGGCTGGAGACGACGGACGTGTTCATCGA
GTGCACCGCCACGGACCTTACCAAGGCCAACATCGTCCTCGACACCATGG
TGACCATGTTCAGTGAGTACTGCGGCGACAAGTTTTCGGTGGAGCCTGTG
GACGTTGCGTACGACGACGAGAGCGGCGAGGTGAAGACGACGCCCCTCCT
TTCCACCCGGACCGAAAAGGCCTCGGTCGCGGAGATTTGCTCCATCATCG
GCATCGAGATCGAGGAAGAGGAGATCTGTCGGCTTTGCACCAAGATGCAG
CTGGGGCCAGCGGAAGTAGTGGAGATGGGAGGGGGAGAGGGAGGGAAGGG
GATCAAGGTCACGGTGCCGCCGACTCGCAGCGACATCTTGCACCCGGTCG
ATGTCGTAGAGGACGTGGCCATCGCCTACGGCTTCAACAAGATTCCGACA
ACGCTGCCCGCCACCCTCACGGTCGGGGGGCATCAGCCCCTGAACAACTT
CGGAGACCTCTTGCGGGAAGAGATCTCCAGAGCTGGGTACACGGAGATGC
TGACGCACGGCCTTTGCTCAAGGGCGGAGAACTTCAAGATGCTTCGGCGC
CAAGAGGAGCCGTGCGTTTCCCTGTCCAACCCCAAGCACGTGGAGTACGA
GGTTGTTAGGACCAGCCTGCTCCCCGGAGCTTTGAAAACGGCGCAGTTCA
ACCGCGCGATGCCGGTGAAGGACGGCGTGCGCCTCTTCGAGATCTCGGAC
GTGGTCGTACGCGACGATTCCTGCGACACCGGGGCCAGAAACTGCCGCCG
TCTGGTGGCCACCTACATGGGACCCACCGCGGGGTTCGAGATCATCCACG
GTCTCGTCGACAGAATTATGTCGCTCGTTCAGGTGGCGCCTTCGGAGGAA
TACTCCGGGAACGATCCGCGTGCACGAGTGGGGGGTCCGTGGAGGGAGAA
CATGCGCTACCGCATCGAGCCGGTTGACCGCCCCACCTTCTTCCCGGGAC
GGTGCGCGGACGTTTTGCTGATGGTGAAGGACACGGAGGAGGGGGGCTCC
GCCGGTTGGAGGGAAATCAGACTGGGGTCCTTCGGGATGCTACACCCGGA
GGTGCTCAAGGCCTACGACTTGCGGGATCCCAGCTCCGCCGTAGAGATTG
ATCTGGAGCCACTCATGTAACGGTTTGGCGATGGTGTGGGAGGGCATGCT
CTTTGTCTAGGAGTAGGTGGTCTTCTTCTTGCCGGGTCTACTGCTGCTGC
TGCTTCGCGTTGATGTGGCGTGTGTTTCGTGATGGCCTTCTTCACTTAAA
ACCCATCGATTCGTTTCTGGGGGCAGTCGCTTTTCATGGCAAGTGTTACA
ATAGTTGTTCACCGAAGCCCTGCTTCGATTTCAGGTATAAGGCATCGAAT
TACTCTCGTGGTCCACCTGTCCATCGTGCAGAGCTTCGTACGTGGGGAAA
GCTTTGGCGGTCAACTGGCGTTTGTGTATCGAGTTGCAATTGCTGTGGTT
AAAAGATTTTGCAATCGATATCAGAGTCTATTCCATCACCGTTGCACGAC
TCGTGTGTTTTTTGTTCACTTGGTGTGATCGGTGGGGTCCGCTCGAACGG
AACAGTATGGCTTACATTGGTTTTACAGCCTTCTGAGATTCAGCACGGCC
GTTTACGCCGCTCCTGCCTTAGATACCGGTAGTCTCTCTGGTCCACTGCG
GCCGGCAGTACATTTCCCCGCCTGTCGATATTAGCCCCTAGACAGGTAGA
AATCCACCACATCAAGGTATACCTCTTTCGACCCCCGGGGTGAAATGGGC
AGGCACTT
back to top

protein sequence of EsuBft992_4a-0001

>EsuBft992_4 ID=EsuBft992_4|Name=EsuBft992_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=638bp
MPTLGVNRDDLFEALGHVYTEKEFDELCFEFGIELDEVTSEAIELEKQSQ
GGGRAGGAGAASTDIVYKIDIPANRYDLLCIEGLARALRVFLGKEDSPVF
RTVEPAGGAGARQKMTVGSGAAKIRPYVVCAVLRGVTFNAKSYKSFMDLQ
DKLHQNICRRRTLVAIGAHDLNTVTGPFRYDAVPPSDINFVPLTPSDQGT
FNAKALLDLYNTDPSVKHLKPYTPIIYESEVYPVIKDANGDVLSLPPVIN
GHLSRIRLETTDVFIECTATDLTKANIVLDTMVTMFSEYCGDKFSVEPVD
VAYDDESGEVKTTPLLSTRTEKASVAEICSIIGIEIEEEEICRLCTKMQL
GPAEVVEMGGGEGGKGIKVTVPPTRSDILHPVDVVEDVAIAYGFNKIPTT
LPATLTVGGHQPLNNFGDLLREEISRAGYTEMLTHGLCSRAENFKMLRRQ
EEPCVSLSNPKHVEYEVVRTSLLPGALKTAQFNRAMPVKDGVRLFEISDV
VVRDDSCDTGARNCRRLVATYMGPTAGFEIIHGLVDRIMSLVQVAPSEEY
SGNDPRARVGGPWRENMRYRIEPVDRPTFFPGRCADVLLMVKDTEEGGSA
GWREIRLGSFGMLHPEVLKAYDLRDPSSAVEIDLEPLM
back to top

mRNA from alignment at Scaffold_539:23852..33540-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft992_4a-0001 ID=EsuBft992_4a-0001|Name=EsuBft992_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=9689bp|location=Sequence derived from alignment at Scaffold_539:23852..33540- (Ectocarpus subulatus male Bft15b)
AACGAGCAGCAAAGCCTCCACGTTCCCGATACGGTGAGTTCTTGCGTGAC GATCCGACAGGGTATTGTTGGTCACCTGTACTGTAGAAGTTGTGCGAAAC GAAGGACGTCAGTGCGTTATTCGCTCGAAGAACGTTCTGTGTGGTGCAGC TGTGTTTGACGCCGTTGGAGCACACCCCCCTTCCTCATGGCCGCGGCAGG TAGGCTTGACTCCTCAGCCAGCAGCGTAATCTGCTTATTCCTAGGTCCTG CTCTGCTTATTCCTCTGTAAGCTTCTTGCACAACAGGACGCATTTCCCGA ACAACATATTGTGTCTGTAAAACCCATGCACAACGGACCTGCGGTGTGTT GCATACCATTTGCAGCGCAAGGGGGGGCTGTGGGCCGCGCTTCCAGGCGG AGACAGGCTGATCGTGGGGATCGCTAGCCACCAGCATGCCTACGCTGGGA GTGAACAGGGATGACCTCTTCGAGGCCCTTGGTCACGTCTACACGGAGAA AGAGTTCGACGAGCTCTGCTTCGAGTTCGGCATCGAGCTGGACGAAGTGA CCTCGGAAGCGATCGAGTTGGAGAAGCAGTCGCAGGTGTGTATGCATAGA TATGAACCAACAACATGTGTTCGTGCACGGAGAAGACGCAAGGCATCGTG TTTTCCGTGGGGGATGATGTGCAAAGAGCTTTATGGACGCCGATTGGCTA CATTTTGCCATTCCTCGGGCACTCCGGACCTCGGTTACGTATCGGTGATG CTGCGGTACTGCTGATAGTATCATCGTGGAGGATTTCGCCCCTGTTGCCC TCCTCCGCCGCCCCACCCATGCCTCATCCCTTCACCAACCCTATCCACCT AGACGATATCGGCTAGTTGTGTAAGTTGGTTAGCCGTGTCTTCTTCAGCT TTTCACCGTCGAATGCGAAGCGGAACGCGCGGTTTACTCTTCCTCATCTT TTATTGCGTGCATACAGTAAGTATATCGCGGTGTACAGGAGCTGTGAACT CACCGGGTTATACAAGGACCCGCGCATTGGGGGGGGGGGGGGGGNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGACAGTTGTAAGCACTGT GTAACTGCCTCGAGGGTGCTTGACCATTTTAACACAACGTGGTGCGATCA TCCCCCTTGCGCGGAGTGAGGGTTCTCCACCCCGCACAACATGATCTACT CGACCACCATTATGGTTCCCGCAGAAAAAAAACAGAGGTCAAAAAAAAAA AAACGGTAACCTGGTTGCCGAGTTCACGAAGTGAATTGGCTTGTTTTACA ACGTCGTTGCCAGGCGACGAAAACCCAATCCCGATGGCAAACATCGGGGG GGGCGGCTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCAACCCCG ATGGCAAACACCGGGGGGGAGAATTGGGGGAAGGTCCTGAATCCAAAGTA GTAGAGCCAAGTTGTTGTGCCAATGATTTTTCCCGCGACATGTCGGGAGC TCTACTGCTGTGTGCATATAGCCCGCAAGAGATGGTGACCGCGTCTTTGT TATTCTCCTCTTGCTGACTCTACAGGGTGGAGGTAGAGCAGGAGGAGCGG GAGCAGCCTCGACCGATATCGTGTACAAGATCGACATCCCGGCCAACCGG TACGATCTCCTGTGCATCGAAGGGCTTGCCAGGGCGCTAAGAGTCTTCTT GGGTGAGTGCGTGTTGTACAGCAGTGAGTGTTGAGTACGATATTGCTTGG GCATTTCTCCGTCCTGCCGTCAGGCGTGTGCTCGGTCATCTCTCTGATTG GCACAGAGCGCCAGGTCGGTTGTAGTCTGCGCAACAACTATGGAAACCAC CCTCAGCTTCTCTCTCTTCTAAGAGGTGGTCAGAGTTGAGTGAATGTGTG CGGAGATGATGCAGTGAATGACATGGAGTGGAATATCGTGTCATAAGCGC TATCGGCTCACGGAAAGCAACGTACTTTTGTAGTGTCATACCCGCCTTAC TGGCAAATTTATATTTCTCGTACGATGAAGTTTACCATGTACACCGTCAG CGCACAATGCCTGTCTGGTGTTGGTGATCGCACTTGAAAAGGGACAGTAG CATAAGGGTGTTCAGGTTTGTTGTCGTTGGCAACAAAAAGCACAGCAGTC GAATGGAGACTTGGTGTCGGCTGCACAACCTGCAGAGCGGGGGTACACTG GGTACCCCGCGTGCAACTACAGAGGGCGCACGTGAGGTGGTGTCTTGCTT TGTTTTTCTTCCTTTCCCCCTATCAGACTCATCCGATCCCATACAAATGT GCTTCGTCTCAAGCACGAGATTTTGCCTCGTTCGTGTTATTTTTTTTCAC CTTCTCTCGACCCTGGATTCGATTTTGGCGTGCCTGTGATTTTCGGCGTC CGCCTTGCGATCTTGGGCCGGGTCCCTACAAAAATCACATCTCATCGCGA GCGCAATATTCCAAGAGATCACCCCAACGCGCGATTTCTCTGGCAACTCG CCCACTGTTTATGAACCGACTGCAAGAGACGAACCAACAAGCTGTCGTTC CCTCATTTCCCACCCCGCAGGCAAAGAGGACTCGCCCGTCTTCCGCACCG TTGAGCCTGCCGGGGGCGCGGGCGCGCGTCAAAAGATGACGGTTGGGTCC GGGGCGGCCAAGATCCGTCCGTACGTTGTGTGCGCCGTGCTTCGAGGGGT GACTTTCAACGCCAAAAGCTACAAGAGCTTCATGGATTTGCAGGTCTGTT TTGATGGCGTTTTTATTTGGGCGTGTCACGTTTCTGCCCGCCCCCTGTGC TTGGTGATGTGAGAGCCTGGTCCGGTGAGAACCCAGCGTGCTCCGTCGCG GCTTTGTAGGGATGCGAGGTCAATGGTCTAACGACTACGGCATTCACGAC AATGAGAACCCCCCCCCCCCNCACCTCGGAGGGTCCGATGTCGCTGGTGC TGCTCGTTGTTTGGTTGGTCAACGTGGCTCTGTTTGGCTCCCGTAGCTGA AAGATTGGCTTCTGCGTTTGTCATCCATAACATCTCCGGGAACTCTTTGC CGTATAAATGCATCGAAGAACTTCTGTGCCTTGTTTGTTGTATGCTGCCG CGGGATCATGCCACCAAGTCGGACACGAAGAATTTTTCCTTCACCAGCGT GTGGTGGCGTCTACATTCCTGGCTCCTGGTACCTGCGCTCTCCGCTTGCT TCGTTGCCATGACCTTACGTGTGAAGTTCGATAGAAAGCGCTACGTTCTC ACCCAGCTTTCACATGGCGCATAGTTTGCTCAGCCTCTTCTGTTTTTTTG TGGCAAAACGTTTTTTGTCGTTTTCCTCGGTGTCGGATGCAGGACAAGCT GCACCAGAACATCTGCCGACGCCGCACCCTCGTCGCTATCGGGGCGCACG ACCTCAACACGGTCACGGGGCCTTTCCGCTACGACGCCGTTCCTCCTTCG GACATCAACTTCGTGCCACTCACGCCCAGCGACCAGGTACTGTTGGTAAA CGGTATTTTTGTGCTGGTTCTGGTGGTGAGAGTGTTGGCTGCACGCTGTA CAGCGCTCTAGGATAGGTGGGGTATTGTTGCTGACGGGAGCGCACCGTAG GGTCGAAGCTTGCGAAACCTGCAGTTAAGGGCATGGACAACATGTCTTTT CAACCCATGAACCTATGCTTGAGGCGAGGCGAGTTGTGACGACCTTTGGA CCGAAAAAAAGATGGCAAAACCGCAACAGCAAGAGTTCTGGCGGTTGCAC GGATGTGCGATCATCGGTCGAAGATCCACAACCAATGGATGGTGCTGTCG AAACCCGATCGACACGCGCATCGCAAGAAAGCTCTCGACATGTCTCTAAA ACCGCCCTTTTCGGCATTGACAACCTCTTGGTTGTGTTGAAAATCGACCT TTATGGTCCATCACACACCTGTGCGTTCGCCCTCATCGGCACAATCAGTG CAACCGTGTCCGACCATTCACGCTCTCACGACAACAACATACCGGCTCCC CCCCCCCCCCCCCNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN NNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCCCCTGTGCGTGCTCTT TTGACAGGGGACGTTCAACGCCAAGGCGCTGTTGGACCTATACAACACGG ACCCTTCCGTGAAGCACCTCAAGCCCTACACACCCATCATCTACGAAAGC GAGGTAGACGCGATTCGATGCAACTTCTACTACTATTCCGCCAGTCCGCG GGTCCCCTGGGCCGTTGTTGATGGTGGTGGTAGTTTCCCTGTAGCTGGTC TGTACGGGGACCCGGGCGAAGATGTAGCGTGAGTGCACGTTAGCCGAGGA GAAACCCTTTGTGGAAAAAGGCGACCTTAATAAAACAAACCGCACCGCAT GTAGGTTTTGATTGTATTCGTTGCGTCGGAGGTGGTGAACCATCGCCCGT CTCGGACACCCCTACGAAAGGTTTGTGCCGTCATTTTTTTTTTTCAGGTG TACCCTGTCATAAAGGACGCCAACGGGGACGTCTTGTCGCTGCCCCCGGT CATCAACGGTCACCTGAGCCGCATCCGGCTGGAGACGACGGACGTGTTCA TCGAGTGCACCGCCACGGACCTTACCAAGGCCAACATCGTCCTCGACACC ATGGTGACCATGTTCAGTGAGGTAAGCAACGTGTGATTTTACGCTCTGTC TTGATGTTCCTCATAGGACTTTTTTTTTGTGTGTGCGAGACGTACGTGGG TAAGGGTTCAGTGAGGCAAGTCACCCAAAACACCAGCGCTCCGTCTTGCG TGTTCCTCTCGGGAGTTTGTCTTTTGTTTGTGCGAGACGCACATGCATAA CGGTTCAGTGAGGCAAGTCACCTACGGTATATGCGCTTCGTCTTGCGTAT GTTCCTCATAGTTTTTTTTTGGCGTGTTGTGAGACGCACGAGAGTAAGCT TCACGGGGGCCTTACACGTGGATCCCTCTGCGTGATGTTTGTAGACCCTC GCATGCGTTTGGGATGGACAGCACCATGTCGGGGGCAGATTGTCTTCAGT TATCTTGTTGCGTAGGGACTCTGGAGAGCAAATGATAAACAGGCGATTGT AAGGATGAGGAGGAATTGAAAGTATTCTGAGCTGTTTCGCGTACGAACAC CGATCGCTGCACGCAGCCCGTTAAAAAACAAACCGTACAATACTCTCATC GTGTGATTGCCTGTTTTTGGCCGAACTAACATTTTTTTTCGTGCGTTGTT CCAAATTTCGCAGTACTGCGGCGACAAGTTTTCGGTGGAGCCTGTGGACG TTGCGTACGACGACGAGAGCGGCGAGGTGAAGACGACGCCCCTCCTTTCC ACCCGGACCGAAAAGGCCTCGGTCGCGGAGATTTGCTCCATCATCGGCAT CGAGGTGAGAGTCTTCTTCCACCGCCATTTAGCTGTTTGTTCCCGGTGGG TATGTCACTGTAACAAGTTTCTGTATGCGCAGCAGTGGGCGTGATCGGCC GCGTGCTTGTGGAGGGTGGGCGCGCGCGCTTACGGTTCGCGGTTGGTTTG GCGAGGCTGCCCGCCCCTCCCGCTCCCCCCCCGCGAAACAAGCCGGAGTA TCACGGGTCGGCAACCTCGAGTCTGGGAAATAGTGTAGTTGGCGGCAGAA AAGCGGCGCGTGATGATGAGAAGTCGTGTACCAAGGCGGCGCACGACGGC GAAACCAGCACGCCAGCCAGGTCAACGCAAAATCCACCGAACTCCGGCAG CGACCTATTTACCTTTACTACGACCTTTAACAAACGGCGGCACGTGCTGT AGACGTGACCCGACTTCACTAACTCCACCATCGCGGTAACGTCCGCTCGC TTGTCAGATCGAGGAAGAGGAGATCTGTCGGCTTTGCACCAAGATGCAGC TGGGGCCAGCGGAAGTAGTGGAGATGGGAGGGGGAGAGGGAGGGAAGGGG ATCAAGGTCACGGTGCCGCCGACTCGCAGCGACATCTTGCACCCGGTCGA TGTCGTAGAGGACGTGGCCATCGCCTACGGCTTCAACAAGTGAGGCAGGC TTTCGCTTTCGTGTGACGGGGCTCCCCTTTTTTTTTTTCGAGCGCGTGGG TAAAAGGGCCACGACGTCTTGATGTCTTCCCGTTTACAAGATCTTGTGCT CGCTGCTGTGCATGCAGAGTATTCTCTTTGAGTTAACCTTTTTTTTGTGT TTAAGAATATGGGTCGATTGAAGCTGCGTGCAAGCACAATAAACCGACAA GCCGGAATCGAACCGTTTTTTTTATGTCTCCCGCTGAGCGTCATAAAAAT TGAGCGGAAGCATTTCTGTACAAGGACATCGAGGTCTGGCGGCTGCTGAA ACGACGACCATGCCGGCCGACACACAGCAGTCACAACCAAGCGCGTCAGG CTCCCACTGGGGACTTGCTTTTCTAACCTTCGGTTCGTGCTGCCGATTCT GCTGCTGCTGGTGGTGGTAACGACCGTCTCGCTCGTTCAGGATTCCGACA ACGCTGCCCGCCACCCTCACGGTCGGGGGGCATCAGCCCCTGAACAACTT CGGAGACCTCTTGCGGGAAGAGATCTCCAGAGCTGGGTACACGGAGATGC TGACGCACGGCCTTTGCTCAAGGGCGGAGAACTTCAAGGTGAGGCCATTT GTTTTCGACGTTACCTCTTGAAAGGACCACAAACAGGGCGGGGAAGTTCA ACGTGATGCCATTTTGTGTTCGGCATGACCTCTTGAAAGGACCACAAATA GGGCGGATGTGACGGCATCTGTATTCGAAATGTGGGTGTGTTGAGCGTGT AGCGATAGTGAGTGGGTGTTCTTTTTCGTCCATGTTTTAATCTGGGCTCC GTGATGCTCGATGGTCCTGCGTGCGTAACACGTTCAACGCTGTCTGAGCT TCCAAGTAAACGCTGGTTGCTGAGTGCCCCCCCCCCCCCCCCGTTTTCGT TCGGCAGATGCTTCGGCGCCAAGAGGAGCCGTGCGTTTCCCTGTCCAACC CCAAGCACGTGGAGTACGAGGTTGTTAGGACCAGCCTGCTCCCCGGAGCT TTGAAAACGGCGCAGTTCAACCGCGCGATGCCGGTGTGTTGTTTGCTCTG CCTGCTGCTGCTGCTGCTGCTGCTGCTGTTGGTGTTGGCGTTGGCGTTGT CACTGGTGCTGTTGTGTCGCGTGCTGCGCGGTGGCGGTACTGGTCGTCCA TGTCGTGTTTTTTTCGACGTTGGCGCTACCGGCCCTTCTATGTTTGGCCG ATGGTGGCGGCGGAATTGGTTTCGGCGCTACCGTGGTGTCCCTAATGATA CCCCACCCGACTTGCCCATATTGCATGACTCTTCCTTGTAGGCATTGCAT CACTCCCCCCCCCTCTCTCGATTTTATGGAATCCCGTTTTGAGCACCGCA TCCATTGTTTGAATCCGTGTGCCCTCTTGATCTACGCAATATAGTCCAGG CGTGCCTGTCTATGACGTCACTCGTCTGTTTCGCCTACCCCGGTGCTTGC TCCTAACCCCGAAGGTGAAGGACGGCGTGCGCCTCTTCGAGATCTCGGAC GTGGTCGTACGCGACGATTCCTGCGACACCGGGGCCAGAAACTGCCGCCG TCTGGTGGCCACCTACATGGGACCCACCGCGGGGTTCGAGATCATCCACG GTCTCGTCGACAGAATTATGTCGCTCGTTCAGGTGGGACGGGAATGGGAC GGGGCTGGATGCACGTGAAACGGGGGGGATAAGCAAAGAGGTACGGGTTG TTTGATATTTGATGAGTATGTATATCGGACTGGGGTCGTTTTGAGACCAT TCGTGGTCACCGCCACCTTTCTCTTCCTGCGCATGGTATGTGGTAAGGAG AAATTAACACCGGAATACTACAGCACGCACTCAGGGAAGAGCGTGTTGCA GGTAGCATAGTATGGACACCGTAAGACCGCACGTATGAAAGAACGGATTC CATCGTACGTATCATGTATGGACGAGAGCATGCGACGCATGTTATATTTT GGTAACGTCAGGTAACGTGACCTAGTGCCGCATGATGCGCGTTACTGTTG TTAAAACGTCGAACACTGTTCTTGGTCTCTCGTTGCAGGTGGCGCCTTCG GAGGAATACTCCGGGAACGATCCGCGTGCACGAGTGGGGGGTCCGTGGAG GGAGAACATGCGCTACCGCATCGAGCCGGTTGACCGCCCCACCTTCTTCC CGGGACGGTACGATGCATGCATACATGCCTCTTTTACATCGCTGAAACCG TTTCTGAGTTGTTCTGCGGGAAAGCGCACGCGGTGCATACCATGGTTGGC TGCTGTTTTCCGCGAACGACGTGTTGTCTTTCTCAATAGATAAACCTGTT GTAGGTCGTAGATGGTGTGTGTGGTTGCATGGCGCATGACATGTGTCCGC AGCAACAGCGAGCGTCGTACCCCAATTCTCCCAAGAAGTTTCGCGGGCCA CAGGTTGGATTGTCGAGACTTCCTCGCGCAAGGGAAAAACAGTGCAGCAG CAGTCAGTGACTGGCTCGCATCCTCCTCCGTTTTATCTTTGAATCGCTGG TTTTGACCCCACAAGTCACCCGAAATGGGCACTAGAATTGTGACTATATT CAGGTAGTCGACATGTTGTTTTCCTTCCGCGGAAGAAACCATGGTGGTGA CCACCTCGCTTGGAGGTGGAAACTGTGCTTCTGTGACCGCGACGTTTCGC TCCTGTATTCATCAACCACTACTCGCGTGCAGGTGCGCGGACGTTTTGCT GATGGTGAAGGACACGGAGGAGGGGGGCTCCGCCGGTTGGAGGGAAATCA GACTGGGGTCCTTCGGGATGCTACACCCGGAGGTGCTCAAGGCCTACGAC TTGCGGGATCCCAGCTCCGCCGTAGAGATTGATCTGGAGCCACTCATGTA ACGGTTTGGCGATGGTGTGGGAGGGCATGCTCTTTGTCTAGGAGTAGGTG GTCTTCTTCTTGCCGGGTCTACTGCTGCTGCTGCTTCGCGTTGATGTGGC GTGTGTTTCGTGATGGCCTTCTTCACTTAAAACCCATCGATTCGTTTCTG GGGGCAGTCGCTTTTCATGGCAAGTGTTACAATAGTTGTTCACCGAAGCC CTGCTTCGATTTCAGGTATAAGGCATCGAATTACTCTCGTGGTCCACCTG TCCATCGTGCAGAGCTTCGTACGTGGGGAAAGCTTTGGCGGTCAACTGGC GTTTGTGTATCGAGTTGCAATTGCTGTGGTTAAAAGATTTTGCAATCGAT ATCAGAGTCTATTCCATCACCGTTGCACGACTCGTGTGTTTTTTGTTCAC TTGGTGTGATCGGTGGGGTCCGCTCGAACGGAACAGTATGGCTTACATTG GTTTTACAGCCTTCTGAGATTCAGCACGGCCGTTTACGCCGCTCCTGCCT TAGATACCGGTAGTCTCTCTGGTCCACTGCGGCCGGCAGTACATTTCCCC GCCTGTCGATATTAGCCCCTAGACAGGTAGAAATCCACCACATCAAGGTA TACCTCTTTCGACCCCCGGGGTGAAATGGGCAGGCACTT
back to top

Coding sequence (CDS) from alignment at Scaffold_539:23852..33540-

>EsuBft992_4a-0001 ID=EsuBft992_4a-0001|Name=EsuBft992_4a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1917bp|location=Sequence derived from alignment at Scaffold_539:23852..33540- (Ectocarpus subulatus male Bft15b)
ATGCCTACGCTGGGAGTGAACAGGGATGACCTCTTCGAGGCCCTTGGTCA
CGTCTACACGGAGAAAGAGTTCGACGAGCTCTGCTTCGAGTTCGGCATCG
AGCTGGACGAAGTGACCTCGGAAGCGATCGAGTTGGAGAAGCAGTCGCAG
GGTGGAGGTAGAGCAGGAGGAGCGGGAGCAGCCTCGACCGATATCGTGTA
CAAGATCGACATCCCGGCCAACCGGTACGATCTCCTGTGCATCGAAGGGC
TTGCCAGGGCGCTAAGAGTCTTCTTGGGCAAAGAGGACTCGCCCGTCTTC
CGCACCGTTGAGCCTGCCGGGGGCGCGGGCGCGCGTCAAAAGATGACGGT
TGGGTCCGGGGCGGCCAAGATCCGTCCGTACGTTGTGTGCGCCGTGCTTC
GAGGGGTGACTTTCAACGCCAAAAGCTACAAGAGCTTCATGGATTTGCAG
GACAAGCTGCACCAGAACATCTGCCGACGCCGCACCCTCGTCGCTATCGG
GGCGCACGACCTCAACACGGTCACGGGGCCTTTCCGCTACGACGCCGTTC
CTCCTTCGGACATCAACTTCGTGCCACTCACGCCCAGCGACCAGGGGACG
TTCAACGCCAAGGCGCTGTTGGACCTATACAACACGGACCCTTCCGTGAA
GCACCTCAAGCCCTACACACCCATCATCTACGAAAGCGAGGTGTACCCTG
TCATAAAGGACGCCAACGGGGACGTCTTGTCGCTGCCCCCGGTCATCAAC
GGTCACCTGAGCCGCATCCGGCTGGAGACGACGGACGTGTTCATCGAGTG
CACCGCCACGGACCTTACCAAGGCCAACATCGTCCTCGACACCATGGTGA
CCATGTTCAGTGAGTACTGCGGCGACAAGTTTTCGGTGGAGCCTGTGGAC
GTTGCGTACGACGACGAGAGCGGCGAGGTGAAGACGACGCCCCTCCTTTC
CACCCGGACCGAAAAGGCCTCGGTCGCGGAGATTTGCTCCATCATCGGCA
TCGAGATCGAGGAAGAGGAGATCTGTCGGCTTTGCACCAAGATGCAGCTG
GGGCCAGCGGAAGTAGTGGAGATGGGAGGGGGAGAGGGAGGGAAGGGGAT
CAAGGTCACGGTGCCGCCGACTCGCAGCGACATCTTGCACCCGGTCGATG
TCGTAGAGGACGTGGCCATCGCCTACGGCTTCAACAAGATTCCGACAACG
CTGCCCGCCACCCTCACGGTCGGGGGGCATCAGCCCCTGAACAACTTCGG
AGACCTCTTGCGGGAAGAGATCTCCAGAGCTGGGTACACGGAGATGCTGA
CGCACGGCCTTTGCTCAAGGGCGGAGAACTTCAAGATGCTTCGGCGCCAA
GAGGAGCCGTGCGTTTCCCTGTCCAACCCCAAGCACGTGGAGTACGAGGT
TGTTAGGACCAGCCTGCTCCCCGGAGCTTTGAAAACGGCGCAGTTCAACC
GCGCGATGCCGGTGAAGGACGGCGTGCGCCTCTTCGAGATCTCGGACGTG
GTCGTACGCGACGATTCCTGCGACACCGGGGCCAGAAACTGCCGCCGTCT
GGTGGCCACCTACATGGGACCCACCGCGGGGTTCGAGATCATCCACGGTC
TCGTCGACAGAATTATGTCGCTCGTTCAGGTGGCGCCTTCGGAGGAATAC
TCCGGGAACGATCCGCGTGCACGAGTGGGGGGTCCGTGGAGGGAGAACAT
GCGCTACCGCATCGAGCCGGTTGACCGCCCCACCTTCTTCCCGGGACGGT
GCGCGGACGTTTTGCTGATGGTGAAGGACACGGAGGAGGGGGGCTCCGCC
GGTTGGAGGGAAATCAGACTGGGGTCCTTCGGGATGCTACACCCGGAGGT
GCTCAAGGCCTACGACTTGCGGGATCCCAGCTCCGCCGTAGAGATTGATC
TGGAGCCACTCATGTAA
back to top