Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft98_20 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Length | 204 |
| Hectar predicted targeting category | other localisation |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-14_003100.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft98_20a-0001 ID=EsuBft98_20a-0001|Name=EsuBft98_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2049bp|location=Sequence derived from alignment at Scaffold_510:98444..101050- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
CCCATCACAGCTGATCACCTCACGAGGCAGCAGGTGCGGTGCCCAGCAGG
TCCCCAGCGACGCTCCAGAGCACCACAGCACAACACACTCAAATCCACGG
CTATGTTGAGTTGGGACAGCGAGGAGTTCAACTTTGTCGGTCTTGCACGG
AGCCCTGTCAAGCGGACGCCCCGGACGTACCACGACGACGATGGCGCCGT
GATCAAGACCGAAGAGCCTTTCTCGCGCTCAACGACTGACCGCATGTCCA
CGGGGACTGCTCGCTCAGCCGGGTACTCCTCAGTTGGACCTGCAAGCAGC
GCTCGCCATCGCCAGGCTCTCCGCCCAATGGCCGAAAACAGCGTGTACAC
GCCCGCTCCTTCCGCGCTGGACAGCATGGTCAACATCATCTCGACCTCCA
TCTCCAGTAACAAGAAGGCCCTGACGGCAAGTCGATCCGGCCTACCCGTG
TCCCGCACGCTGAAGTTATCGCCTGCGGACACCACGCGCACCACGGCGGG
CGAGAAGAAAGAACAATCGGTGCTGGTGAGGGCGTACACGCCTGCAGCCG
CCGTCAGCAGGGGGCACCAGCGGCACGAGCAGCAGGAAGCGGTATCGCCG
GCCGGCAACATGCTGCACGGTGATCACACTCACCGCTCGATGACCCGGTC
TGCTCTCCTCTCCGCCCTGGATCACTCACCGTACACCCCCCAGCAACAGC
ACCAACAGCAAGGATCTCATGTTTCGCTAGACGACAGCTCGCCAAGAGCA
ACACAGGCCGGCAACAACGCGGCCTCCCCGTCTTTCTCCTCGGACATCCC
CACCGGGATCAAGAAAGCCTCATCCCCGTCTTCTCCGCAGGCCTACGCCC
AGCACCACGACCACGATGGCCCCTTGACACCGTCCTTCCTTGCGCCGGCC
GCGAGACTCGGCGAAGCGGGCTTTACGGACGACGACCGTAGCCGTACGTG
GTCCGAGTGCTCCTTCACCAACGCGGTGTTCTCTCCAGACCCCGTCACCC
CCGCCGTGGCGCGAGAGAGTCGAGGCGGCAACGACGGCGGCGGCGACGGC
GGCAACACCGCCGTGGGCAGCGGCGACAGAGGTGGGGTGTCCAGAGGTGA
GATGGCCAAAGGCGAAGAAGGCCATGGCGCCAGGGCGACGCCGACTCCGC
CGCAGAGAAGGACTAGCAGCCCGCCTGCGTCGGAGATCGCGTACACCCGC
GACCACACCGCTACCGCTCACACTGCGTGCACCCCGGCAGCCGTGTCGGC
ACTCGTGCGGATGGGCGGCCGCTCCGTGGCAGCGGAGACACCCGGGAGCG
GAACAGCTGCGAACAGGTACCGCGGTTTCATTGCGCAGAGCCCGATCGCG
CTATCCGCCACCGCGAAGAAAGAAGACCCCGAGGAGGGAGAGGCGGAGAT
GCCGAGCACCCCCGCCGCAGCGGCGACTCTCGCGGCAATGATGAAGGTCG
CTAGTGCTGGCGTGCATGGGTCTGATCCTGCTGCTGCTGAGGAACAGGGG
GTGATCATGGGCAAGAATCAGGACTCTACCTCTCAAGAAGCTTCAGGAGT
ACGGCCGAAGGATGTAAAGAACTTGCGCCAGCGGAGGACAGCGGCTCCCG
AGACACCATCCCGACGAGAGAGTATGAGTGCCGGGCTGCCGATAATAACC
CCAAGGCGCAGGAAGGCGGCGTCGCAGCTTCTCGACCTAAGCAAGGCAAC
CCCGAGGGGAATGATCAGGGGATTGCTGTCGAGCAACGGACATCCCGCCC
AGGCTTTGCAGAACAAGCACCAGGCGCACCAGCGCTTCGTGCCCCAGGTG
GCTAAGCTGGTGGAGAACGTTGAGGAGGAGACTCCGCGAGCGCTGCTGAA
AGGAGCTTGCGTTCGCGAAGACAACCGCTCTCGGTGGAAGTCCACATCCG
TTGCAGAAGCTGCCGCCGCTGCCGCTGCCGCCGCAGCTGCTACGGCGGCG
GCTGCTGTTGCCGCGGCGGGTTCCGCGGACGGGGCTGGCGGCTTCGTGGA
GGGTCGCGAGGCGGGCGAGATTAGTGCCGAGCTAGCCGCTGTGAGTTGA back to topprotein sequence of EsuBft98_20a-0001 >EsuBft98_20 ID=EsuBft98_20|Name=EsuBft98_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=648bp
MLSWDSEEFNFVGLARSPVKRTPRTYHDDDGAVIKTEEPFSRSTTDRMST
GTARSAGYSSVGPASSARHRQALRPMAENSVYTPAPSALDSMVNIISTSI
SSNKKALTASRSGLPVSRTLKLSPADTTRTTAGEKKEQSVLVRAYTPAAA
VSRGHQRHEQQEAVSPAGNMLHGDHTHRSMTRSALLSALDHSPYTPQQQH
QQQGSHVSLDDSSPRATQAGNNAASPSFSSDIPTGIKKASSPSSPQAYAQ
HHDHDGPLTPSFLAPAARLGEAGFTDDDRSRTWSECSFTNAVFSPDPVTP
AVARESRGGNDGGGDGGNTAVGSGDRGGVSRGEMAKGEEGHGARATPTPP
QRRTSSPPASEIAYTRDHTATAHTACTPAAVSALVRMGGRSVAAETPGSG
TAANRYRGFIAQSPIALSATAKKEDPEEGEAEMPSTPAAAATLAAMMKVA
SAGVHGSDPAAAEEQGVIMGKNQDSTSQEASGVRPKDVKNLRQRRTAAPE
TPSRRESMSAGLPIITPRRRKAASQLLDLSKATPRGMIRGLLSSNGHPAQ
ALQNKHQAHQRFVPQVAKLVENVEEETPRALLKGACVREDNRSRWKSTSV
AEAAAAAAAAAAATAAAAVAAAGSADGAGGFVEGREAGEISAELAAVS back to topmRNA from alignment at Scaffold_510:98444..101050- Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft98_20a-0001 ID=EsuBft98_20a-0001|Name=EsuBft98_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2607bp|location=Sequence derived from alignment at Scaffold_510:98444..101050- (Ectocarpus subulatus male Bft15b)
CCCATCACAGCTGATCACCTCACGAGGCAGCAGGTGCGGTGCCCAGCAGG
TCCCCAGCGACGCTCCAGAGCACCACAGCACAACACACTCAAATCCACGG
CTATGTTGAGTTGGGACAGCGAGGAGTTCAACTTTGTCGGTCTTGCACGG
AGCCCTGTCAAGCGGACGCCCCGGACGTACCACGACGACGATGGCGCCGT
GATCAAGACCGAAGAGCCTTTCTCGCGCTCAACGACTGACCGCATGTCCA
CGGGGACTGCTCGCTCAGCCGGGTACTCCTCAGTTGGACCTGCAAGCAGC
GCTCGCCATCGCCAGGCTCTCCGCCCAATGGCCGAAAACAGCGTGTACAC
GCCCGCTCCTTCCGCGCTGGACAGCATGGTCAACATCATCTCGACCTCCA
TCTCCAGTAACAAGAAGGCCCTGACGGCAAGTCGATCCGGCCTACCCGTG
TCCCGCACGCTGAAGTTATCGCCTGCGGACACCACGCGCACCACGGCGGG
CGAGAAGAAAGAACAATCGGTGCTGGTGAGGGCGTACACGCCTGCAGCCG
CCGTCAGCAGGGGGCACCAGCGGCACGAGCAGCAGGAAGCGGTATCGCCG
GCCGGCAACATGCTGCACGGTGATCACACTCACCGCTCGATGACCCGGTC
TGCTCTCCTCTCCGCCCTGGATCACTCACCGTACACCCCCCAGCAACAGC
ACCAACAGCAAGGATCTCATGTTTCGCTAGACGACAGCTCGCCAAGAGCA
ACACAGGCCGGCAACAACGCGGCCTCCCCGTCTTTCTCCTCGGACATCCC
CACCGGGATCAAGAAAGCCTCATCCCCGTCTTCTCCGCAGGCCTACGCCC
AGCACCACGACCACGATGGCCCCTTGACACCGTCCTTCCTTGCGCCGGCC
GCGAGACTCGGCGAAGCGGGCTTTACGGACGACGACCGTAGCCGTACGTG
GTCCGAGTGCTCCTTCACCAACGCGGTGTTCTCTCCAGACCCCGTCACCC
CCGCCGTGGCGCGAGAGAGTCGAGGCGGCAACGACGGCGGCGGCGACGGC
GGCAACACCGCCGTGGGCAGCGGCGACAGAGGTGGGGTGTCCAGAGGTGA
GATGGCCAAAGGCGAAGAAGGCCATGGCGCCAGGGCGACGCCGACTCCGC
CGCAGAGAAGGACTAGCAGCCCGCCTGCGTCGGAGATCGCGTACACCCGC
GACCACACCGCTACCGCTCACACTGCGTGCACCCCGGCAGCCGTGTCGGC
ACTCGTGCGGATGGGCGGCCGCTCCGTGGCAGCGGAGACACCCGGGAGCG
GAACAGCTGCGAACAGGTACCGCGGTTTCATTGCGCAGAGCCCGATCGCG
CTATCCGCCACCGCGAAGAAAGAAGACCCCGAGGAGGGAGAGGCGGAGAT
GCCGAGCACCCCCGCCGCAGCGGCGACTCTCGCGGCAATGATGAAGGTCG
CTAGTGCTGGCGTGCATGGGTCTGATCCTGCTGCTGCTGAGGAACAGGGG
GTGATCATGGGCAAGAATCAGGACTCTACCTCTCAAGAAGCTTCAGGAGT
ACGGCCGAAGGATGTAAAGGTGCGTTTTTTGAATTGTTCCGTATTCTCCG
CAGCCTACAAATTAGAATTAAGAAGACTTTTCGTTGCGCCGATTGACGGC
TCCGCAGGCGGTCCTGTCACAATGGGATGGACAGCAGTAGGTGCTCGAAG
TTCTCTTTCGGTCCTGAGCGTACAATCGCCCAAACAAAAACGCACTCTAC
AGCAGTAGCGACCGCATGCACTTGTTCGCTTGAAACGACGCAAGATTCAG
TGTAGAATTGGCTGATCGACGCCCGCGATGCTGAACAATGCAGAACTTGC
GCCAGCGGAGGACAGCGGCTCCCGAGACACCATCCCGACGAGAGAGTATG
AGTGCCGGGCTGCCGATAATAACCCCAAGGCGCAGGAAGGCGGCGTCGCA
GCTTCTCGACCTAAGCAAGGCAACCCCGAGGGGAATGATCAGGTATGTAC
CTTGTGGTGGCGTGTTTGACGGCAGAGGTAGAAGCGCAGCAGCGTGGCTT
CGTCTCTGTACATGTTGTCCTGTCTGTTTTATGAAGCAGAGCTTGCTTCG
TTTGCGGAGATTGAAATATGCCCGGTCGGTAGAGGCAACAGCGGTAGCGC
CCAAGTAGTTTGGTGGGTGGTGTCAGGACATGGCTTTGATCTCTTCTGTT
TTGAAATATGCTTCCAAGGTTGTTCAAACGAAACACTGCTCTGTGTGTGG
TCCCACCCTCGTCCGTGTTGGCGTAGGGGATTGCTGTCGAGCAACGGACA
TCCCGCCCAGGCTTTGCAGAACAAGCACCAGGCGCACCAGCGCTTCGTGC
CCCAGGTGGCTAAGCTGGTGGAGAACGTTGAGGAGGAGACTCCGCGAGCG
CTGCTGAAAGGAGCTTGCGTTCGCGAAGACAACCGCTCTCGGTGGAAGTC
CACATCCGTTGCAGAAGCTGCCGCCGCTGCCGCTGCCGCCGCAGCTGCTA
CGGCGGCGGCTGCTGTTGCCGCGGCGGGTTCCGCGGACGGGGCTGGCGGC
TTCGTGGAGGGTCGCGAGGCGGGCGAGATTAGTGCCGAGCTAGCCGCTGT
GAGTTGA back to topCoding sequence (CDS) from alignment at Scaffold_510:98444..101050- >EsuBft98_20a-0001 ID=EsuBft98_20a-0001|Name=EsuBft98_20a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1947bp|location=Sequence derived from alignment at Scaffold_510:98444..101050- (Ectocarpus subulatus male Bft15b)
ATGTTGAGTTGGGACAGCGAGGAGTTCAACTTTGTCGGTCTTGCACGGAG
CCCTGTCAAGCGGACGCCCCGGACGTACCACGACGACGATGGCGCCGTGA
TCAAGACCGAAGAGCCTTTCTCGCGCTCAACGACTGACCGCATGTCCACG
GGGACTGCTCGCTCAGCCGGGTACTCCTCAGTTGGACCTGCAAGCAGCGC
TCGCCATCGCCAGGCTCTCCGCCCAATGGCCGAAAACAGCGTGTACACGC
CCGCTCCTTCCGCGCTGGACAGCATGGTCAACATCATCTCGACCTCCATC
TCCAGTAACAAGAAGGCCCTGACGGCAAGTCGATCCGGCCTACCCGTGTC
CCGCACGCTGAAGTTATCGCCTGCGGACACCACGCGCACCACGGCGGGCG
AGAAGAAAGAACAATCGGTGCTGGTGAGGGCGTACACGCCTGCAGCCGCC
GTCAGCAGGGGGCACCAGCGGCACGAGCAGCAGGAAGCGGTATCGCCGGC
CGGCAACATGCTGCACGGTGATCACACTCACCGCTCGATGACCCGGTCTG
CTCTCCTCTCCGCCCTGGATCACTCACCGTACACCCCCCAGCAACAGCAC
CAACAGCAAGGATCTCATGTTTCGCTAGACGACAGCTCGCCAAGAGCAAC
ACAGGCCGGCAACAACGCGGCCTCCCCGTCTTTCTCCTCGGACATCCCCA
CCGGGATCAAGAAAGCCTCATCCCCGTCTTCTCCGCAGGCCTACGCCCAG
CACCACGACCACGATGGCCCCTTGACACCGTCCTTCCTTGCGCCGGCCGC
GAGACTCGGCGAAGCGGGCTTTACGGACGACGACCGTAGCCGTACGTGGT
CCGAGTGCTCCTTCACCAACGCGGTGTTCTCTCCAGACCCCGTCACCCCC
GCCGTGGCGCGAGAGAGTCGAGGCGGCAACGACGGCGGCGGCGACGGCGG
CAACACCGCCGTGGGCAGCGGCGACAGAGGTGGGGTGTCCAGAGGTGAGA
TGGCCAAAGGCGAAGAAGGCCATGGCGCCAGGGCGACGCCGACTCCGCCG
CAGAGAAGGACTAGCAGCCCGCCTGCGTCGGAGATCGCGTACACCCGCGA
CCACACCGCTACCGCTCACACTGCGTGCACCCCGGCAGCCGTGTCGGCAC
TCGTGCGGATGGGCGGCCGCTCCGTGGCAGCGGAGACACCCGGGAGCGGA
ACAGCTGCGAACAGGTACCGCGGTTTCATTGCGCAGAGCCCGATCGCGCT
ATCCGCCACCGCGAAGAAAGAAGACCCCGAGGAGGGAGAGGCGGAGATGC
CGAGCACCCCCGCCGCAGCGGCGACTCTCGCGGCAATGATGAAGGTCGCT
AGTGCTGGCGTGCATGGGTCTGATCCTGCTGCTGCTGAGGAACAGGGGGT
GATCATGGGCAAGAATCAGGACTCTACCTCTCAAGAAGCTTCAGGAGTAC
GGCCGAAGGATGTAAAGAACTTGCGCCAGCGGAGGACAGCGGCTCCCGAG
ACACCATCCCGACGAGAGAGTATGAGTGCCGGGCTGCCGATAATAACCCC
AAGGCGCAGGAAGGCGGCGTCGCAGCTTCTCGACCTAAGCAAGGCAACCC
CGAGGGGAATGATCAGGGGATTGCTGTCGAGCAACGGACATCCCGCCCAG
GCTTTGCAGAACAAGCACCAGGCGCACCAGCGCTTCGTGCCCCAGGTGGC
TAAGCTGGTGGAGAACGTTGAGGAGGAGACTCCGCGAGCGCTGCTGAAAG
GAGCTTGCGTTCGCGAAGACAACCGCTCTCGGTGGAAGTCCACATCCGTT
GCAGAAGCTGCCGCCGCTGCCGCTGCCGCCGCAGCTGCTACGGCGGCGGC
TGCTGTTGCCGCGGCGGGTTCCGCGGACGGGGCTGGCGGCTTCGTGGAGG
GTCGCGAGGCGGGCGAGATTAGTGCCGAGCTAGCCGCTGTGAGTTGA back to top
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