EsuBft987_7a-0001 (mRNA) Ectocarpus subulatus male Bft15b

You are viewing an mRNA, more information available on the corresponding polypeptide page

Sequences
The following sequences are available for this feature:

spliced messenger RNA

>EsuBft987_7a-0001 ID=EsuBft987_7a-0001|Name=EsuBft987_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2721bp|location=Sequence derived from alignment at Scaffold_103:55282..61974- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.  
TGATCGCCCTGCTTTCCTGCCCACCCGGTGTCCTGTTGTAACGCTCCCCA
GCGACCACGATCTTCTTGCAATAGGTATCCACGGGGAACAACCATGAGCA
TCAGAAATGCGTTGTGCGCGCCCTGCGACAAGAACCCGCAAAAGGCGATC
GCCTATGCGTGGTTCACATCGATCGTCATGGTGATGGTCGCCTTCATCTG
CGCCTGCGCGTCGGCGGCGCACAGCGACGGAGAAGGGAGCGCGTCTCTGG
GTTTCGCGGCCGTGTGGACGGTGCTTCTCCTGATCGGCCTTTCCGTCGGA
GGCTCTCTCGTCATGCGCAAGTACCGAACATCCCTCGCCGTGGGCTTCTT
TCTGGGCGTGGTGATCATCATGTCGCAGACCATGCTCGTGCTCTTCGCGG
TGTTCGCCGGCCGCGCCTCCACCTCCGAGGACGTAGACGAGAAGCCCGCC
GACCGCGCGTTCGCCGCCTTCTGCTTCTTCCTCTGGATCGTCTACTCGAC
CTTCGCTGGCATGTTGGCTGTGTTCCGCGAGGACATCATCATGGACGACA
CCACTAAGTACGAGGATGACCCGGTACCGGAAGCATCCGGCCAGCCCCCG
ATCGGCGTGTGAGCCGAACGGCGTGATGATGCAGAATAAAGTAGGCTTCG
GCACGGGTAGGTTGCTCTGCGTTTCTCTTTCCGGGACAGAAGGGGCGAAA
TATTTCGCGGCCTACTGCTATGGCGTTGGGAAGAGGCGTTCGGTGGGCGA
CATGAGGAAGAGTTCGTTGTGTGGGTTTGCATGTATGCAGGGAAATTTTT
CTTCGTACTGGCAGGCAGATTGTTATTAATGTTCATGTTTTACCCCAGGA
TGCCACCATTTACGGTGTAGCTGCCGGACGTGGAGCCGAAGACGTGCTGA
ATCTTCCTCATGATGCGTTTGGCTAAGCACTTGATTGAGTGGATGTAGCT
CGTAGCTCTCGTCTTGATCGCTGTCGAGGATTGGTGCGCTGTGATCCCTC
CTGGCTTGATTTTGCAAAGGCTGCAAGTACATCAACGCCCGTAGAAATAT
TCACGTGGTGTGCGCACGGAGACGAAGGTAGGTAGCGGAGCCAAGCGCTC
TTTTTTTTTTTCTCAGGCAATGCTTGCCGTTCGCTCACTGTTGGTAAGTC
TGTAGGATAGGTCAGGTTTGTTTTCTATTTAGGGGTGGCAGCTTGGCTCG
TCGATGCTGTGAGATGGTATTCTAGCACGACTTTGTTGTGTCGCCTGCTC
CCGTGTTTCCGCTCTAGGAGTGGCGGTCAAGATTTGCTCTTGTGCAAGAA
TATTGGGGGGGCAAGAGAAAGGGTAAGGGGGGGGGTTAACCCGTGGTGTG
TCCTGTGCCCCACCTGAGTCCGTGTTGCTGTACGTTGTTTATCGCCTTGT
GCGAGCCTGGAACTGCGATTGTTATTACTCTTTCTTCGATCAGCATAGAC
CTACTCTATCATTGTAGTGGCACGCCTACGAGAACCAAAACATTAACCTC
TTTTACCGCACAAGCGAGATGAACAATCCACACTTGAAATGCCATTTTCC
CAGGCAACGCTAGTCTTGTTGCAGTGCTTTATCCTTTTCCCTGATGCCAC
GGCCATTTTTGCGAACGCAGCACGCTGCTGCCATATCCTCTTGTGTACCG
GACGGGCCGCTCGGGGAGCCGTTCTGCCCACTGTGCTCTTTTCATTTTGC
GAGTATAGTTTAATTCAAAGGCAGTTGCAACAGACGATCGATCTCCAGGT
CTCATCGGTCCCATGTCGGAGGAGTACGAACGGTTTGCCACAGTCAGTGC
CGTTCATCAGCGAGTGCGGTTGTCGTCGCCTCGAGAAGAAGCTGCCCGCC
ACCGCCCGCGGATAGTTCGGCCTGTGCGACAAGCAAACGCCCTTGATCAC
GGGATACAACCGTCGCCAGCTCGCTTGGTGGCACCAACGCGGCCCCTCGA
CGATGCCACCGCCCTTCGTGGTGTTGTTCGGATTTTGCCAGTGCTCGCTG
CCGTCGGCGCCCCAAACCTCGCTCCTGACCGAACCTTTGCCTTCGTGGAT
GCCTGTCGGCGAAGCACGCGGTTTCGAGACGGTGCCGCCGCTGGGGTTGC
AGAGGTGGCGGCCCTATGCCGCGACTGCGCCGTCGCCGTCGCTGCCGATT
TCGATTTACGGTTGACCTCCGCCCTCGCCTTTGTGTCTGCCGAGGAAGAG
TCTATGATGCTGCTACTGATACGTCCCGTTTGTGTTCTCTTGGCCTTGCT
TGCCACCACTCCCTCGCTCGATTTCCTTGCCCCCGTGGCGCCGATGCCGC
TCTCCGTGGCACCGTCGGCCGGGCCGCCGCTCCGCCGGGGCCGCTCCGGT
CGCACGGCGGCGGCCCTACCAGCTGTCCTGACTGATGCCGATGCCACTGA
TCGTCCAAGCCTAGTCCCGCCGCCGCCGGCCTCCAACTCCACAGCAGCAG
TACGTCCAGCGGGGAAGGTTTCAGTTTTGGCCGACTTAGTCCCTGTAGGT
GGCGACCGCCGCTGCTCTGCTTGCTTCCCCCTCAAGGGGGTCCTAGCCCT
ACCAGACGCGCTCCCTCCCGACCACCTAATGCATCTCTCGTCGACGAGAT
GGTCGCGTTCTGTGTTGTTGCTTCGACGATGTGCCAGCAGAGATGAAGAC
GAAGCTTTCTTTGGTCGTGCGGTGGGCGGCAGAGCCGATGATGGTGGCGG
TGGTGGCGGTAGTGGTGGCGA
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protein sequence of EsuBft987_7a-0001

>EsuBft987_7 ID=EsuBft987_7|Name=EsuBft987_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=144bp
MVMVAFICACASAAHSDGEGSASLGFAAVWTVLLLIGLSVGGSLVMRKYR
TSLAVGFFLGVVIIMSQTMLVLFAVFAGRASTSEDVDEKPADRAFAAFCF
FLWIVYSTFAGMLAVFREDIIMDDTTKYEDDPVPEASGQPPIGV
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mRNA from alignment at Scaffold_103:55282..61974-

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>EsuBft987_7a-0001 ID=EsuBft987_7a-0001|Name=EsuBft987_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=6693bp|location=Sequence derived from alignment at Scaffold_103:55282..61974- (Ectocarpus subulatus male Bft15b)
TGATCGCCCTGCTTTCCTGCCCACCCGGTGTCCTGTTGTAACGCTCCCCA
GCGACCACGATCTTCTTGCAATAGGTATGGCCGGTGAAATCACAGTTGAT
TGTAGGCCCTACGCTCCGTGAACACGGCGGTTGCACCCCTCCCTTCTGTT
GCTCTTTTTTTGGTTTTTCGACAAAAGTAGGCTCTCCTGCTCGTACACGC
CCCGCCTAGCCTTTGTGGCTGGGTTCTGTGCTTTTGTAGAACCCATACCG
TGGACTAGCATGATTGCAATCCCGATAGTGCTGTTGCCACTGCGCAACCT
CCTCTGTTAATTCCATATGGTGCCATCTCTTTCGAATCCCGTGCGTGTTC
CTTAGTGCCTTGGCGGCGATGCAATTTTTGGCGGGTCGGGGTGACGAGAG
AGGCGTCGCAACTGCTCCATACTCGTCCGTCGCTCAAAGATTATTCGAAC
CTACTTGTCTGCCCAGCAGACGGGTGACGGGTGTGTATGCAAGTCGAGGC
ATTTGATGCGATTAGGCAGCCTCTCTCTCTCCCTTGTCGGGTCTGTACGC
CTCCGCTACGCCATCGTTGCTACGAGCGAGCAGAACTCATCCCCAAATTC
GAGACCTCTCAAAACGCCCGAGATGTTACTACGTAAAGCTGCGTCCATGT
GTTACAGGAAGCGCGCGATGTAATTATTCCATGTTTTTGTTCCGCCACGG
GGGTTTGGGGTGAGGCCAGTGTGTGTGGTCAACTACGCGAGCCTAGCTAG
TGTCGGTGTCGTTCTTCGTCCTTTGAGACATCGATATATCCCTTCATTGA
AACGGCCATCGGGAACGACCGTTTTTCGAGGACTTAAACTCCGTATCCAT
ACAATGCCGTAACAGGTTTTTTTTTTTCTCTTTTCAAACTTTCTTTCTAC
ATATCAAATGTCAAGACGACGTGGTATCCATATATATACAAAGCAAATCA
GTCAGGATCTCGAGTTGGATCTACGGTGCTTACAACTCGCAAGCTTGTAA
GCAAACGGCAGCAGAGGGGCAGGTAGAGTAGACATGAAATTCTATTTTTT
GTGCCAGCACAGCACCCACTTCCATTCCTGCCCTCCTGAACCCAATCGGT
GCACCAGGTATCCACGGGGAACAACCATGAGCATCAGAAATGCGTTGTGC
GCGCCCTGCGACAAGAACCCGCAAAAGGCGATCGCCTATGCGTGGTTCAC
ATCGATCGTCATGGTGATGGTCGCCTTCATCTGCGCCTGCGCGTCGGCGG
CGCACAGCGACGGAGAAGGGAGCGCGTCTCTGGGTTTCGCGGCCGTGTGG
ACGGTGAGAGAGCCGCGCGGGCCGGAAATGAGGCGGAGGGGGGGATCGAT
CGGCGTGTGACGTGGGGTCACTGGTGGTTTCGTCGGAAACTGTTGATCAG
TCAAGCTCTGGCAGTTGTGGTTGTTATTGTTGTCTCCACAAACTAAGAAC
CGTTCCGGTCTCCGCTCACAGTACTGTTGTACCTTCAAATATTCCGCACT
GGTCCAACTGACCCGGTGCAGGTGTCAACAGCCGCTGTACTTCGTCGGTG
CCGTTTGGCATGCACTTGTTAGCGCGTTGTGGTAGACGTCAGAAGGTATA
TGTAGCCTCACATAAATCTGCAACCACGGATACGGTACGCATGCATCGGC
CCCGCCCCTGCCCCCCCCCCCGGTGTTTGCCATCGGGGTTGGGTTTTCGT
CGCTTGGCAACGACGTTGTAAAACAAGCCNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN
NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCCCCCCCACC
TGCCCGCCTTGTTTCTAGCTAAACGTGCTGCCTCACGCCCATTCCAAAGT
ACTTGCGGGAAATTGATCCATCGTCTGGTCAGGGTGGCCCTTGTCAGACA
AGTTTTCCGTCGAAAATCGAAAATCGACAACAAAGAATGTCACTGATTGG
ACCAAGCTCCAGTGTTCCGCCGCCGGATATTCAATCTGGCGAATATTCAC
CTATATGGAAACATCGAAAGCGAGCACGAACAGAGACTTGAAATGAGAGT
CGAAAATGCCAACCGGAACATGAAGCTGGCGTGCCACACCCTGAATGAAT
CGTACATGCCTTCATTTCGATACCGTCTGGCCACCTACAGATTGCTTGGC
GATGCAAGCAATAGCTTGGCAGAAAGCTAACATCCATTAGAGCACGGTGT
ACTTTCTTTGAGCGAGATCTGCTCCAGGTTGAAAGATGGAGTCATCGTCG
TGAAATTATTTCTTTGTCGACGCCGTTCAACGGCAGCTGTTGCGGCTTTC
TTACATCAACACGCAGGTTTTAATCACATATTGCTCCCTTAGTTCGTAGC
GTATCGATGCGAGACAAACGCCCCCCGACCCCCCTGATCATCGCCGTTGT
TCTGAGCTATCGTTCACTCTCTTGGATGCCGTGTGGCTCTCATGGTCATG
GTTTGAATAATCGCAACTGGCTTGTACGGGCCTTGGTCGCCTCTTCCTGG
TTGATTTTCGATTTCGATTCCCTGCCTGCACTGCTGTGTAGAGCCAGCCC
GAAATAAAGTCCAAGTTCGATTTCGATTTTCGATGGAACATGTTTTCGAC
ATGGGCTACCCTCAGAGAGCTGGCTGCATTGTGTTGTTATGCCCGTGGTC
TTGTGGAGCGTAGGTAAACCACAACCGGATGTTCATTGGAGTCTGCCGAG
ATATAGACGGAATCGCTGCTTTTGTCTCTTTTGTCGTTGTATTATCATGA
CCGAGCTAACCAGCTGCACAATGAATTTGAATAGGTTCGCGATGCCCGGT
CCGACGAGATACAGCAACTGGAGGAGTGTAGAGGGCTGCTGGTCGGTCTA
TCCCTTGGGTTCAGATTAAATGGTTGTTGTTCCACGTGCGCCACATCATC
TACACCCGGACACTCCGCCCGGCGTGTCTCAGCTGCGCGTGACTCCATGC
TTGCTGACTTTTCATTCCGGATGCTTGGCTTTGCAACGTGGTGATTTGTG
TTCCTACTTTTCACTGTACAATCTGTGCATCCCCACCCTCAATGTCGACG
TTGGTAAGACAACTGCGGACGACAAACTGCGACGGATAACGCACAATTAT
TACGATCCTACCGCCGCAATTTCTCCATGGACGTTCTTGTCTCAGTTTGT
CGACCCTCGCCAATTCCAACCATCCGTATGCGCATGCCTAATAGAACAGG
TTGTCCGGGCCCTGCTGCTCGTTGTGTTCGGATCCCTCAATGCTGCCTAG
TGAGTCACATGGACATGACTTTCGACCTATAACAAACTGTATGTAAACTC
CTACAACGGACAGCTTAAACCCGACCGCCCCCCCCGCGCCGCCCACCGCC
CGTCCCCCCCCCGTCGCGACAAAAAGGTGCTTCTCCTGATCGGCCTTTCC
GTCGGAGGCTCTCTCGTCATGCGCAAGTACCGAACATCCCTCGCCGTGGG
CTTCTTTCTGGGCGTGGTGATCATCATGTCGCAGACCATGCTCGTGCTCT
TCGCGGTGTTCGCCGGCCGCGCCTCCACCTCCGAGGACGTAGACGAGAAG
CCCGCCGACCGCGCGTTCGCCGCCTTCTGCTTCTTCCTCTGGATCGTCTA
CTCGACCTTCGCTGGTGAGTGAGAAGGGGAGTGCTTGTTCTGTCTACTCG
GAAGGGAGAGGGGAGGGGGTAAGAATGGGTCCAAGCATTGGGATTGGGAA
GCGCGACGGGCTGGATGGGGGCGACTTGATATTGGCGTGAGAAATTTGGA
CGGAAGAGCTGTGAGAGGGGTGAAGGCGCTCTGTTCGGCAACTTGGTAGT
TTTTTGTGTTAGCCGAGGTAATGAGTGTCAAGGTTGAATTAACTGGCCTG
CTAGCCTTGCTTCACGAGCTATTGGACCGGGTATCGGAAGACGTGTGCTG
TGGCAGCAACTCTCCAATATTGCAGCCCAACAGCGTTGAAGGACAGGTCA
AAGGTGATGCGGCTCGCCTGGTGATACAAGTCGAGTTGTAAAACTCCCCA
TGTTCCTACGTCCACTATTCATTTGCCCAGGCATGTTGGCTGTGTTCCGC
GAGGACATCATCATGGACGACACCACTAAGTACGAGGATGACCCGGTACC
GGAAGCATCCGGCCAGCCCCCGATCGGCGTGTGAGCCGAACGGCGTGATG
ATGCAGAATAAAGTAGGCTTCGGCACGGGTAGGTTGCTCTGCGTTTCTCT
TTCCGGGACAGAAGGGGCGAAATATTTCGCGGCCTACTGCTATGGCGTTG
GGAAGAGGCGTTCGGTGGGCGACATGAGGAAGAGTTCGTTGTGTGGGTTT
GCATGTATGCAGGGAAATTTTTCTTCGTACTGGCAGGCAGATTGTTATTA
ATGTTCATGTTTTACCCCAGGATGCCACCATTTACGGTGTAGCTGCCGGA
CGTGGAGCCGAAGACGTGCTGAATCTTCCTCATGATGCGTTTGGCTAAGC
ACTTGATTGAGTGGATGTAGCTCGTAGCTCTCGTCTTGATCGCTGTCGAG
GATTGGTGCGCTGTGATCCCTCCTGGCTTGATTTTGCAAAGGCTGCAAGT
ACATCAACGCCCGTAGAAATATTCACGTGGTGTGCGCACGGAGACGAAGG
TAGGTAGCGGAGCCAAGCGCTCTTTTTTTTTTTCTCAGGCAATGCTTGCC
GTTCGCTCACTGTTGGTAAGTCTGTAGGATAGGTCAGGTTTGTTTTCTAT
TTAGGGGTGGCAGCTTGGCTCGTCGATGCTGTGAGATGGTATTCTAGCAC
GACTTTGTTGTGTCGCCTGCTCCCGTGTTTCCGCTCTAGGAGTGGCGGTC
AAGATTTGCTCTTGTGCAAGAATATTGGGGGGGCAAGAGAAAGGGTAAGG
GGGGGGGTTAACCCGTGGTGTGTCCTGTGCCCCACCTGAGTCCGTGTTGC
TGTACGTTGTTTATCGCCTTGTGCGAGCCTGGAACTGCGATTGTTATTAC
TCTTTCTTCGATCAGCATAGACCTACTCTATCATTGTAGTGGCACGCCTA
CGAGAACCAAAACATTAACCTCTTTTACCGCACAAGCGAGATGAACAATC
CACACTTGAAATGCCATTTTCCCAGGCAACGCTAGTCTTGTTGCAGTGCT
TTATCCTTTTCCCTGATGCCACGGCCATTTTTGCGAACGCAGCACGCTGC
TGCCATATCCTCTTGTGTACCGGACGGGCCGCTCGGGGAGCCGTTCTGCC
CACTGTGCTCTTTTCATTTTGCGAGTATAGTTTAATTCAAAGGCAGTTGC
AACAGACGATCGATCTCCAGGTCTCATCGGTCCCATGTCGGAGGAGTACG
AACGGTTTGCCACAGTCAGTGCCGTTCATCAGCGAGTGCGGTTGTCGTCG
CCTCGAGAAGAAGCTGCCCGCCACCGCCCGCGGATAGTTCGGCCTGTGCG
ACAAGCAAACGCCCTTGATCACGGGATACAACCGTCGCCAGCTCGCTTGG
TGGCACCAACGCGGCCCCTCGACGATGCCACCGCCCTTCGTGGTGTTGTT
CGGATTTTGCCAGTGCTCGCTGCCGTCGGCGCCCCAAACCTCGCTCCTGA
CCGAACCTTTGCCTTCGTGGATGCCTGTCGGCGAAGCACGCGGTTTCGAG
ACGGTGCCGCCGCTGGGGTTGCAGAGGTGGCGGCCCTATGCCGCGACTGC
GCCGTCGCCGTCGCTGCCGATTTCGATTTACGGTTGACCTCCGCCCTCGC
CTTTGTGTCTGCCGAGGAAGAGTCTATGATGCTGCTACTGATACGTCCCG
TTTGTGTTCTCTTGGCCTTGCTTGCCACCACTCCCTCGCTCGATTTCCTT
GCCCCCGTGGCGCCGATGCCGCTCTCCGTGGCACCGTCGGCCGGGCCGCC
GCTCCGCCGGGGCCGCTCCGGTCGCACGGCGGCGGCCCTACCAGCTGTCC
TGACTGATGCCGATGCCACTGATCGTCCAAGCCTAGTCCCGCCGCCGCCG
GCCTCCAACTCCACAGCAGCAGTACGTCCAGCGGGGAAGGTTTCAGTTTT
GGCCGACTTAGTCCCTGTAGGTGGCGACCGCCGCTGCTCTGCTTGCTTCC
CCCTCAAGGGGGTCCTAGCCCTACCAGACGCGCTCCCTCCCGACCACCTA
ATGCATCTCTCGTCGACGAGATGGTCGCGTTCTGTGTTGTTGCTTCGACG
ATGTGCCAGCAGAGATGAAGACGAAGCTTTCTTTGGTCGTGCGGTGGGCG
GCAGAGCCGATGATGGTGGCGGTGGTGGCGGTAGTGGTGGCGA
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Coding sequence (CDS) from alignment at Scaffold_103:55282..61974-

>EsuBft987_7a-0001 ID=EsuBft987_7a-0001|Name=EsuBft987_7a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=435bp|location=Sequence derived from alignment at Scaffold_103:55282..61974- (Ectocarpus subulatus male Bft15b)
ATGGTGATGGTCGCCTTCATCTGCGCCTGCGCGTCGGCGGCGCACAGCGA
CGGAGAAGGGAGCGCGTCTCTGGGTTTCGCGGCCGTGTGGACGGTGCTTC
TCCTGATCGGCCTTTCCGTCGGAGGCTCTCTCGTCATGCGCAAGTACCGA
ACATCCCTCGCCGTGGGCTTCTTTCTGGGCGTGGTGATCATCATGTCGCA
GACCATGCTCGTGCTCTTCGCGGTGTTCGCCGGCCGCGCCTCCACCTCCG
AGGACGTAGACGAGAAGCCCGCCGACCGCGCGTTCGCCGCCTTCTGCTTC
TTCCTCTGGATCGTCTACTCGACCTTCGCTGGCATGTTGGCTGTGTTCCG
CGAGGACATCATCATGGACGACACCACTAAGTACGAGGATGACCCGGTAC
CGGAAGCATCCGGCCAGCCCCCGATCGGCGTGTGA
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