Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Seed ortholog | 2880.D7G3L2 |
| ProteomeId | EsuBft986_16 |
| Protein domains | IPR012337 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 3 |
| Max annot lvl | 2759|Eukaryota |
| Length | 198 |
| Hectar predicted targeting category | other localisation |
| Evalue | 1.54e-27 |
| EggNOG OGs | 2CZK4@1|root,2SARG@2759|Eukaryota |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Cross References
External references for this mRNA
| Database | Accession |
|---|
| GO | 0003676 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft986_16a-0001 ID=EsuBft986_16a-0001|Name=EsuBft986_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1981bp|location=Sequence derived from alignment at Scaffold_548:38542..41203+ (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGTTCAAGGAGATGATGGCGACCGCTGCAGGAAACACGCCGTACCCAGA
GCTGCCTGCGGAGCGTGTGAAAGACCTCCTCGTCGAGATGTACATCGCCA
CGAAGAAGGCAGTCATGAGCAACATGTTGGAGGAAGTGAAAAATGCACCT
CTGCCCATTCTGCACCACATGATCGACATCTGGACTGACAAAGGATCGGG
GCGCAAGACGCTCTGGGAGAGGCCAAGGCCTGGGGTGCTTCTCGAGATCG
TCAAGGCTATCCTGCACGAGTTCGGCTTGCGCACATCGGACCTCGCGTCG
GGTACTGCGGACAGTGGATCGGACGTCAAGTCTGTGAGCTTCAACGGCCT
CCACCCGCAGTTTGGGGTTCTGTGGAATTGGTGTTTTTGCCACCTGATGG
TCAAGGCCGCTGAGGACGGCTTTGGCACCCACGTCGACCCTCAGAAGTCC
AAGAACCCAGAAGCGCGCGACATGCTCAAGAAGCTCATCAATCTGGTCGG
GACCCTCCACAGGTCTTCCAACTTCAAGGCTAAGTTCGACGACCTTCAGG
TGGACGTGTTGGGCGAGGTCTTGAAGATCCCCAACCAAGCTCCTAAACGG
TGGCTCACCCTGGTTCGCACACTGGAGCGCGTCATCCGCTTGTGGCACGT
CTTGAGGAAACTCTACAGCGACACGGGAAAAACGTTTCCACTCGAAGAGG
GCGACAACAAGGACTGCATCCTTCAGCTCTACTCGCTGCTGCAGCCTCCT
TCCTCCGTCACGCGTGATGGCCAGTACGGGGGTGCGCCGATGCTGGCGGA
CATCTACATGAAGTGTGGCATGCTGAAGATGCGAGTGCTGGACCCGTCGG
AGGAACTCAAGGTCTTCGACATTCCGCCGCTTGGAGAAGACAGCCTCCCG
GACCGCGAGGAACAGAAGAAAGCTCTCCCGCACAAGGTGGTAGCACACGA
CGACTTGCGCCCCGTGGCACAGAAGCGCGCAACGAACTCTGCCGCGCGCT
CGTGACGAGGTTCTACAGTCGTGTGTGGGACACATCCACCCTGGACCCCT
CGGTGTTATGCGATGCTGCCTGCCTCCTGACACTGCCGTTCAGTGAGGGG
AACTACCTTTCCGCGATGAAGCTTACAGCAGAGGAGGGCAAGTACTTGCC
CGCAGGTCGTGCGTGACGGCCCCTACGCTGGACGAAAAGGTGCAAGAGAA
GCTGGATGGAGCTTGGGCCGAAATCAAGAAGCGAGCCGTCGCAGCCGTGA
AGGCAGCGCAGAGTCGGGCCGCGGGTGGTGGTGAGGGCGGGGGGGCAGGT
CCTTTGGAGCGCGCCCGCACTAGCGCCGCGGGTCCATCTCGTCGCAAGAA
TCGGAAGGACGCCTTCGCAGTTTTCGGTCGCAACGAAGTCGCCCCCCAAA
GCAGCGAAGGAGATGTGGACTTGAGGAGGAGGTCTCGAGCGAGACCACGC
GGTACAAGGGAGTCTTCATTAAGTCAACGACTAGTCTATTGAACGTGTGC
GTGTTACTGCTGTTTGGCATTTTTATTATTGTTACTGTCCATGTGTTGTC
GCAAGCTGCGAATTTGAACAACACTAACAACACAAATCTTCCCGATCCTG
CGGCCCTTCCGTGTCCTTCACCCTTCCAGTTGCCGCCCAGCGAAGCCCTC
AACTACTGGAAGACCATAGGGAAACATTCATTCCCCTCACTCAAGTCGAG
AGAGACTTCAGCCACTGCGGTCTTTTCTGTGTAGGGAACCGCATCCGAGT
AGACGAGTACTGGCTGGAAATCGTGATGTTCCTCAAAGGAAACTACTCGT
TTATTCCTGAGTACAAGGACATCCATCCCCAACATCGACGGGAAGGACAT
AGGGAAGTGCCTCCCTGCAAAGTTCAGCGGAAAAATGACGATCTCCTCAA
AGCAGAGATGGCGCTCGACCCGCTGTCAAACACCAACCCCCCCCAGGAGG
ATGTCATTGGCGTTGGCGAGGATGGGTAGAT back to topprotein sequence of EsuBft986_16a-0001 >EsuBft986_16 ID=EsuBft986_16|Name=EsuBft986_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=334bp
MFKEMMATAAGNTPYPELPAERVKDLLVEMYIATKKAVMSNMLEEVKNAP
LPILHHMIDIWTDKGSGRKTLWERPRPGVLLEIVKAILHEFGLRTSDLAS
GTADSGSDVKSVSFNGLHPQFGVLWNWCFCHLMVKAAEDGFGTHVDPQKS
KNPEARDMLKKLINLVGTLHRSSNFKAKFDDLQVDVLGEVLKIPNQAPKR
WLTLVRTLERVIRLWHVLRKLYSDTGKTFPLEEGDNKDCILQLYSLLQPP
SSVTRDGQYGGAPMLADIYMKCGMLKMRVLDPSEELKVFDIPPLGEDSLP
DREEQKKALPHKVVAHDDLRPVAQKRATNSAARS back to topmRNA from alignment at Scaffold_548:38542..41203+ Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft986_16a-0001 ID=EsuBft986_16a-0001|Name=EsuBft986_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2662bp|location=Sequence derived from alignment at Scaffold_548:38542..41203+ (Ectocarpus subulatus male Bft15b)
ATGTTCAAGGAGATGATGGCGACCGCTGCAGGAAACACGCCGTACCCAGA
GCTGCCTGCGGAGCGTGTGAAAGACCTCCTCGTCGAGATGTACATCGCCA
CGAAGAAGGTGAAAGTTGAAAAATTGAAGTTGGTGAAAGACGTTAACCCC
TCTACGGCGAAGTTTGATTTTAAGCTTTAGTACTTGCTGTCGTTCAAGTC
ACCGATGATACAGAAAAGCAAGCAAACACAACGCTTGACGTGTCCGTTTC
GTTTTTTCTGATACCCAAACTGCTGTGTTTGATTTCCATGCCCCACAACA
CCGCTGTTTCACCGCAGGCAGTCATGAGCAACATGTTGGAGGAAGTGAAA
AATGCACCTCTGCCCATTCTGCACCACATGATCGACATCTGGACTGACAA
AGGATCGGGGCGCAAGTTCCTAGGTGTTCATCTTTTCCACGTGACTGCCA
ACTTCGAGATGAAGCACACCCTGCTCTCTATGAGTACATGAACCGGCCTG
GTGTTGGACGTGACACTTCAAGACTTGCTTCTGTTGAAACACATGTGGCG
CGTACTTCTTTCTACATAAGGGTTTAGCAGGGGTTTCTACTGGAGTTTTG
TTAGGGTATCGGTTAGCTTATTGTTTAGACTATTGGTGCCTTCTGTCATT
ACACTTTGTATTTCACGGAGAGATCGCAACGGACGTGAAATTAATTGTTT
TTGTGTTTTCCTTGCGCACTGACCACGGCTATATTGTCTAACCCCAACAC
CTGACAGAAAGCTTGAGTGCAACGTCCTTTCTGTCACCTCCGTTTCTGTT
CCCGTGCTTCCGCCCAGATCAAGCGCTACCAACCCTCCCAGGACGCTCTG
GGAGAGGCCAAGGCCTGGGGTGCTTCTCGAGATCGTCAAGGCTATCCTGC
ACGAGTTCGGCTTGCGCACATCGGACCTCGCGTCGGGTACTGCGGACAGT
GGATCGGACGTCAAGTCTGTGAGCTTCAACGGCCTCCACCCGCAGTTTGG
GGTTCTGTGGAATTGGTGTTTTTGCCACCTGATGGTCAAGGCCGCTGAGG
ACGGCTTTGGCACCCACGTCGACCCTCAGAAGTCCAAGAACCCAGAAGCG
CGCGACATGCTCAAGAAGCTCATCAATCTGGTCGGGACCCTCCACAGGTC
TTCCAACTTCAAGGCTAAGTTCGACGACCTTCAGGTGGACGTGTTGGGCG
AGGTCTTGAAGATCCCCAACCAAGCTCCTAAACGGTGGCTCACCCTGGTT
CGCACACTGGAGCGCGTCATCCGCTTGTGGCACGTCTTGAGGAAACTCTA
CAGCGACACGGGAAAAACGTTTCCACTCGAAGAGGGCGACAACAAGGACT
GCATCCTTCAGCTCTACTCGCTGCTGCAGCCTCCTTCCTCCGTCACGCGT
GATGGCCAGTACGGGGGTGCGCCGATGCTGGCGGACATCTACATGAAGTG
TGGCATGCTGAAGATGCGAGTGCTGGACCCGTCGGAGGAACTCAAGGTCT
TCGACATTCCGCCGCTTGGAGAAGACAGCCTCCCGGACCGCGAGGAACAG
AAGAAAGCTCTCCCGCACAAGGTGGTAGCACACGACGACTTGCGCCCCGT
GGCACAGAAGCGCGCAACGAACTCTGCCGCGCGCTCGTGACGAGGTTCTA
CAGTCGTGTGTGGGACACATCCACCCTGGACCCCTCGGTGTTATGCGATG
CTGCCTGCCTCCTGACACTGCCGTTCAGTGAGGGGAACTACCTTTCCGCG
ATGAAGCTTACAGCAGAGGAGGGCAAGTACTTGCCCGCAGGTCGTGCGTG
ACGGCCCCTACGCTGGACGAAAAGGTGCAAGAGAAGCTGGATGGAGCTTG
GGCCGAAATCAAGAAGCGAGCCGTCGCAGCCGTGAAGGCAGCGCAGAGTC
GGGCCGCGGGTGGTGGTGAGGGCGGGGGGGCAGGTCCTTTGGAGCGCGCC
CGCACTAGCGCCGCGGGTCCATCTCGTCGCAAGAATCGGAAGGACGCCTT
CGCAGTTTTCGGTCGCAACGAAGTCGCCCCCCAAAGCAGCGAAGGAGATG
TGGACTTGAGGAGGAGGTCTCGAGCGAGACCACGCGGTACAAGGGAGTCT
TCATTAAGTCAACGACTAGTCTATTGAACGTGTGCGTGTTACTGCTGTTT
GGCATTTTTATTATTGTTACTGTCCATGTGTTGTCGCAAGCTGCGAATTT
GAACAACACTAACAACACAAATCTTCCCGATCCTGCGGCCCTTCCGTGTC
CTTCACCCTTCCAGTTGCCGCCCAGCGAAGCCCTCAACTACTGGAAGACC
ATAGGGAAACATTCATTCCCCTCACTCAAGTATGTGGCGCAGCAATCATT
CGCCAGTCAAGCCTCTGCCGCTCAGGTCGAGAGAGACTTCAGCCACTGCG
GTCTTTTCTGTGTAGGGAACCGCATCCGAGTAGACGAGTACTGGCTGGAA
ATCGTGATGTTCCTCAAAGGAAACTACTCGTTTATTCCTGAGTACAAGGA
CATCCATCCCCAACATCGACGGGAAGGACATAGGGAAGTGCCTCCCTGCA
AAGTTCAGCGGAAAAATGACGATCTCCTCAAAGCAGAGATGGCGCTCGAC
CCGCTGTCAAACACCAACCCCCCCCAGGAGGATGTCATTGGCGTTGGCGA
GGATGGGTAGAT back to topCoding sequence (CDS) from alignment at Scaffold_548:38542..41203+ >EsuBft986_16a-0001 ID=EsuBft986_16a-0001|Name=EsuBft986_16a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1005bp|location=Sequence derived from alignment at Scaffold_548:38542..41203+ (Ectocarpus subulatus male Bft15b)
ATGTTCAAGGAGATGATGGCGACCGCTGCAGGAAACACGCCGTACCCAGA
GCTGCCTGCGGAGCGTGTGAAAGACCTCCTCGTCGAGATGTACATCGCCA
CGAAGAAGGCAGTCATGAGCAACATGTTGGAGGAAGTGAAAAATGCACCT
CTGCCCATTCTGCACCACATGATCGACATCTGGACTGACAAAGGATCGGG
GCGCAAGACGCTCTGGGAGAGGCCAAGGCCTGGGGTGCTTCTCGAGATCG
TCAAGGCTATCCTGCACGAGTTCGGCTTGCGCACATCGGACCTCGCGTCG
GGTACTGCGGACAGTGGATCGGACGTCAAGTCTGTGAGCTTCAACGGCCT
CCACCCGCAGTTTGGGGTTCTGTGGAATTGGTGTTTTTGCCACCTGATGG
TCAAGGCCGCTGAGGACGGCTTTGGCACCCACGTCGACCCTCAGAAGTCC
AAGAACCCAGAAGCGCGCGACATGCTCAAGAAGCTCATCAATCTGGTCGG
GACCCTCCACAGGTCTTCCAACTTCAAGGCTAAGTTCGACGACCTTCAGG
TGGACGTGTTGGGCGAGGTCTTGAAGATCCCCAACCAAGCTCCTAAACGG
TGGCTCACCCTGGTTCGCACACTGGAGCGCGTCATCCGCTTGTGGCACGT
CTTGAGGAAACTCTACAGCGACACGGGAAAAACGTTTCCACTCGAAGAGG
GCGACAACAAGGACTGCATCCTTCAGCTCTACTCGCTGCTGCAGCCTCCT
TCCTCCGTCACGCGTGATGGCCAGTACGGGGGTGCGCCGATGCTGGCGGA
CATCTACATGAAGTGTGGCATGCTGAAGATGCGAGTGCTGGACCCGTCGG
AGGAACTCAAGGTCTTCGACATTCCGCCGCTTGGAGAAGACAGCCTCCCG
GACCGCGAGGAACAGAAGAAAGCTCTCCCGCACAAGGTGGTAGCACACGA
CGACTTGCGCCCCGTGGCACAGAAGCGCGCAACGAACTCTGCCGCGCGCT
CGTGA back to top
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