Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft954_2 |
| Protein domains | Coil |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 6 |
| Length | 103 |
| Ec32 ortholog description | expressed unknown protein |
| Ec32 ortholog | Ec-01_004560.1 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft954_2a-0001 ID=EsuBft954_2a-0001|Name=EsuBft954_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1035bp|location=Sequence derived from alignment at Scaffold_235:249235..251602- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
ATGGAGAAGATGAAGCAGGAAGCCGAGCGTGCAGCCGGGGAAGCGGCAGC
CCCGGCAGCCAAGATGGCGGATCTGCAGAGGAGAGTTGAGGAGGCAGAGG
AGAGGAGTTCAGCGGAGAAAGCCGCGAGAAGGAGAGTGGGTGATGCCGGG
TATGCGGCAGGGATGGAGCTGCCGGAGGGGCGGCTACTCTGGGCGGCGGG
GGGCACGGCAGCAACGGAAGCGGCAGCGTCTTCCCCGGTCGCCGCGTTGG
CGCCGGGCAGCGAGACACGCGCAGCGGCGACGGTGGAGGCGTCGGCGGCG
GGGGGCACGGCAGCAGCGGCAGCGGCAGCCTCGTCCCCGGTCGCCGCGTT
GGCGCCGGGCCNGCAAAACGAAGCGGCGTCGTCCCCGGTCGCCGCGTTGG
CGCCGGGTCTTCAGACGAACGTGGCGGCGATGGAGGCGGCGCCGGCGGCG
GAGGGTACGGCAGCAGCGGGTGCATCAGCGTCGTCCCCGGTCGCCGCGTT
GGCGCCGGGCCTTCCGATGGACGCAGCGGCGATGGAGCGGGCGCCGGCGG
CGGTAGGTACGACGGCAGCAGGAACAGCGACGTCGTCCCCGGTCGTCGCG
TTGGCGCCGGGCCCTCGGACGGACGCAGCGGCGACGAGGGCGGCACCGGC
GGAAGGGGGCACGGCAGCAGCGGGAGCATCAGCGAGGTACGTCGGCGTGC
TGAAGAAGTTCAGCTCTGTGGTGGAAGGGAGCGTGATCGAGGGACAGATG
GACCCTGCGGTGGTCGGGAAGTTCAAGATGACGCCGGTGGAGTCCTCCAT
GGCGTCGGACCTTAAAAAAGCCGCCGAGGCGAACGATTCGGCCAAGTACG
TCGCCCCCAAGTACTCAAAGGCGGCCATCGCGGGAGACTGGGTCCTGATG
TGGCAGGACACGGGAGCTGTGTTCCGCCTTCACCTCGGGGAGGACCTCCA
GTTTGAGAGCCTGAAGGGGCTGGGGAGTGGCCAGCTAGGAGGAAGGTGGA
ACCTCTGGGGAACTGAAAGGTTGGATAATTACTAG back to topprotein sequence of EsuBft954_2a-0001 >EsuBft954_2 ID=EsuBft954_2|Name=EsuBft954_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=344bp
MEKMKQEAERAAGEAAAPAAKMADLQRRVEEAEERSSAEKAARRRVGDAG
YAAGMELPEGRLLWAAGGTAATEAAASSPVAALAPGSETRAAATVEASAA
GGTAAAAAAASSPVAALAPGXQNEAASSPVAALAPGLQTNVAAMEAAPAA
EGTAAAGASASSPVAALAPGLPMDAAAMERAPAAVGTTAAGTATSSPVVA
LAPGPRTDAAATRAAPAEGGTAAAGASARYVGVLKKFSSVVEGSVIEGQM
DPAVVGKFKMTPVESSMASDLKKAAEANDSAKYVAPKYSKAAIAGDWVLM
WQDTGAVFRLHLGEDLQFESLKGLGSGQLGGRWNLWGTERLDNY back to topmRNA from alignment at Scaffold_235:249235..251602- Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft954_2a-0001 ID=EsuBft954_2a-0001|Name=EsuBft954_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=2368bp|location=Sequence derived from alignment at Scaffold_235:249235..251602- (Ectocarpus subulatus male Bft15b)
ATGGAGAAGATGAAGCAGGAAGCCGAGCGTGCAGCCGGGGAAGCGGCAGC
CCCGGCAGCCAAGATGGCGGATCTGCAGAGGAGAGTTGAGGAGGCAGAGG
AGAGGAGTTCAGCGGAGAAAGCCGCGAGAAGGAGAGTGGGTGATGCCGGG
TATGCGGCAGGTAACACGAGGATAAGCGGCGCTGGCTATGCGCCTGGGTA
CCATAGCAGGGATGGAGCTGCCGGAGGGGCGGCTACTCTGGGCGGCGGGG
GGCACGGCAGCAACGGAAGCGGCAGCGTCTTCCCCGGTCGCCGCGTTGGC
GCCGGGCAGCGAGACACGCGCAGCGGCGACGGTGGAGGCGTCGGCGGCGG
GGGGCACGGCAGCAGCGGCAGCGGCAGCCTCGTCCCCGGTCGCCGCGTTG
GCGCCGGGCCNGCAAAACGGTACCCTGGTTGCCGAGTTCACGAAGTGACT
TGGCTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCAACCCCGATG
GCAAACACCGGGGGGGGCGGCTTGTTTTACAACGTCGTTGCCAAGCGACG
AAAACCCAACCCCGATGGCAAACACCGGGGGGGGCGGCTTGTTTTACAAC
GTCGTTGCCAAGCGACGAAAACCCAACCCCGATGGCAAACACCGGGGGGG
GCGGCTTGTTTTACAACGTCGTTGCCAAGCGACGAAAACCCAACCCCGAT
GGCAAACACCGGGGGGAGCGGGGGGAACGGCAGAAGCGGCGTCGTCCCCG
GTCGCCGCGTTGGCGCCGGGTCTTCAGACGAACGTGGCGGCGATGGAGGC
GGCGCCGGCGGCGGAGGGTACGGCAGCAGCGGGTGCATCAGCGTCGTCCC
CGGTCGCCGCGTTGGCGCCGGGCCTTCCGATGGACGCAGCGGCGATGGAG
CGGGCGCCGGCGGCGGTAGGTACGACGGCAGCAGGAACAGCGACGTCGTC
CCCGGTCGTCGCGTTGGCGCCGGGCCCTCGGACGGACGCAGCGGCGACGA
GGGCGGCACCGGCGGAAGGGGGCACGGCAGCAGCGGGAGCATCAGCGAGG
TGTTGGTGTTTGCACACGCAACAACTCAAGACTCAAACTTTCGTGGCGGT
TGAATCTATGTGTTTCGTGGGAATTAGTCTGCATGCAGGTTGTGCCGCAA
CAACGTCCGCAACAAAACACTCCGCGTTCTTCGCGCCCGCTGCCCGGCTT
CTTCCACAACTATCAAGCCTATCGTTAATTTCCGCACACACGCACTCTGA
ACTTCCCCCTCGTATCTGGTCCAGCGCGTTCCTTACGCGTATTCTCGATT
TTTTCTCTTTCTTGTGGCCGGTTTCTGCGCAGGTACGTCGGCGTGCTGAA
GAAGTTCAGCTCTGTGGTGGAAGGGAGCGTGATCGAGGGACAGATGGACC
CTGCGGTGGTCGGGAAGTTCAAGATGACGCCGGTGGAGTCCTCCATGGCG
TCGGACCTTAAAAAAGCCGCCGAGGCGAACGATTCGGTCCGTGTTGCTGC
TGTTGTTGAAAGATGTTGTCGGCCCTTCAGCAACCCCTACCGTCTGGCCA
CCTTTACGTAAATCCAGTGACTTTTCCACTGCAGCAGTTGCGGGTATGAC
TCTGCCACTGCAACATTTACGGGTATGTGTCAGCTCTGTCGATGTTGAAG
GTCTAAACACGTTGGTATGACGATCACACCATCGAAACACACGGAGTTGT
CACAAGTCAGCAACTCCACATTGGAGTACAAAGATGAGCAGATGCCTGTT
TCAAGAAGGGTTGCCGTGGCCTTGCCACGGTGTTCGAAGTGTGGCGTTAA
ATGATCAATTCCTTCCGTATGACGGTGTTGACTCATGGTGTATGAGGTGG
CTACGAGTGTACAGGCCTTGCTTGTTATTATCGTGCTTCGAATCGGCCTG
CAGAGCGCAGCCGCTGTTCCCTCCAAGAACAAGCCGCCTGTTTACTCCGA
TGGGGCTTGGCTGAGTGGTCTACATCGTAGTTTTTGAGTCTTATGTATCG
AACACCGCCCACGAGCGTAATCGTAACCACTTGGCGGTCACCCGCATCAC
GTCGCACCTTCGGACGCGCGTCGCAGGCCAAGTACGTCGCCCCCAAGTAC
TCAAAGGCGGCCATCGCGGGAGACTGGGTCCTGATGTGGCAGGACACGGG
AGCTGTGTTCCGCCTTCACCTCGGGGAGGACCTCCAGTTTGAGAGCCTGA
AGGGGCTGGGGAGTGGCCAGCTAGGAGGAAGGTGGAACCTCTGGGGAACT
GAAAGGTATGCTGTTGCAGGTGCCTTCGCGTTGAATTTGTGCCACGGAGG
TCTGTACCCCACTCTTATCCAAGAAGTGAGACGCGTGCTTACGTGAGCGC
AGGTTGGATAATTACTAG back to topCoding sequence (CDS) from alignment at Scaffold_235:249235..251602- >EsuBft954_2a-0001 ID=EsuBft954_2a-0001|Name=EsuBft954_2a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=1035bp|location=Sequence derived from alignment at Scaffold_235:249235..251602- (Ectocarpus subulatus male Bft15b)
ATGGAGAAGATGAAGCAGGAAGCCGAGCGTGCAGCCGGGGAAGCGGCAGC
CCCGGCAGCCAAGATGGCGGATCTGCAGAGGAGAGTTGAGGAGGCAGAGG
AGAGGAGTTCAGCGGAGAAAGCCGCGAGAAGGAGAGTGGGTGATGCCGGG
TATGCGGCAGGGATGGAGCTGCCGGAGGGGCGGCTACTCTGGGCGGCGGG
GGGCACGGCAGCAACGGAAGCGGCAGCGTCTTCCCCGGTCGCCGCGTTGG
CGCCGGGCAGCGAGACACGCGCAGCGGCGACGGTGGAGGCGTCGGCGGCG
GGGGGCACGGCAGCAGCGGCAGCGGCAGCCTCGTCCCCGGTCGCCGCGTT
GGCGCCGGGCCNGCAAAACGAAGCGGCGTCGTCCCCGGTCGCCGCGTTGG
CGCCGGGTCTTCAGACGAACGTGGCGGCGATGGAGGCGGCGCCGGCGGCG
GAGGGTACGGCAGCAGCGGGTGCATCAGCGTCGTCCCCGGTCGCCGCGTT
GGCGCCGGGCCTTCCGATGGACGCAGCGGCGATGGAGCGGGCGCCGGCGG
CGGTAGGTACGACGGCAGCAGGAACAGCGACGTCGTCCCCGGTCGTCGCG
TTGGCGCCGGGCCCTCGGACGGACGCAGCGGCGACGAGGGCGGCACCGGC
GGAAGGGGGCACGGCAGCAGCGGGAGCATCAGCGAGGTACGTCGGCGTGC
TGAAGAAGTTCAGCTCTGTGGTGGAAGGGAGCGTGATCGAGGGACAGATG
GACCCTGCGGTGGTCGGGAAGTTCAAGATGACGCCGGTGGAGTCCTCCAT
GGCGTCGGACCTTAAAAAAGCCGCCGAGGCGAACGATTCGGCCAAGTACG
TCGCCCCCAAGTACTCAAAGGCGGCCATCGCGGGAGACTGGGTCCTGATG
TGGCAGGACACGGGAGCTGTGTTCCGCCTTCACCTCGGGGAGGACCTCCA
GTTTGAGAGCCTGAAGGGGCTGGGGAGTGGCCAGCTAGGAGGAAGGTGGA
ACCTCTGGGGAACTGAAAGGTTGGATAATTACTAG back to top
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