Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| ProteomeId | EsuBft943_5 |
| Owner | apollo_admin@sb-roscoff.fr |
| Nb exon | 1 |
| Length | 104 |
| Date last modified | 2016-06-14 |
| Date creation | 2016-06-14 |
Relationships
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
spliced messenger RNA >EsuBft943_5a-0001 ID=EsuBft943_5a-0001|Name=EsuBft943_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1049bp|location=Sequence derived from alignment at Scaffold_420:533237..534285- (Ectocarpus subulatus male Bft15b)|Notes=Excludes all bases but those of type(s): exon.
GTCAGCCGTGCTTATCCAGCAGCACTAGGCTTGAAACCAATCAACACTCT
AGAGCGAAGGTTATCCCCATACTATCCTAGTGAAGTGGACACATGCCGTC
TGCGTCTGGAGAGTTCGGCATTGGCGGTGCAGCCCCGACTCACAAGGAGG
TCCAGACCGCCATCGACCAGTCCACCGCAAAAATGGAGAGCATGATGACG
GAAAGTTAGGAACCGTCATGGAAGCCCTGTCTCGGTTAGTGCCCGAGACA
CCGCCCGCTGGAAGTACGACCGGAGCGGGCGGCGGGNATCCCCATACTAT
CCTAGTGAAGTGGACACATGCCGTCTGCGTCTGGAGAGTTCGGCATTGGC
GGTGCAGCCCCGACTCACAAGGAGGTCCAGACCGCCATCGACCAGTCCAC
CGCAAAAATGGAGAGCATGATGACGGAAAGTTAGGAACCGTCATGGAAGC
CCTGTCTCGGTTAGTGCCCGAGACACCGCCCGCTGGAAGTACGACCGGAG
CGGGCGGCGGGGGAGAGTCACGGGGGGGAAGGCACGCCCTTCCCGGCGCT
GGTCGTGTGGATCAAGCGCCGATCACCGGACAGGGGCTCGAGGGAGAACG
AGGACTGCCGGACACAGCCCCGCAAGGACCCACGCTGCCGTCTGCGGGGG
GCGTCTCGCGCGAAAGCGAAACCGAAACCAGTGACCCGCCGGCAAGGTAC
GACCCGACCATGAAGGCCCGTATCCCACGCCTCAAGCAGCTATACTTCGA
TGGCCAAGAAAAGAACTGAGTAATGTTCAAGAACGACCACATGACTCAGG
TAGGTGCAAACGTGCGGAATGATGCATGCTCTGAACGATAGCCGAGACAT
TGAGATCCAAGGGATGGATGACGATGGAATGATAGAACAGGGGGTAGCTG
CAGAAGAGGTTCATGTGTACCGGGATTTGTGGGGCACGTTGGTAGGAGCG
ATTTCAGACGAGACTACCAAGCTTATGGTTTACAATAGTAAGGGGCCCTC
AGCAGCGTGGCGTGCACTTGAGCAGACGTTCACCCCACGAACTGGTGGC back to topprotein sequence of EsuBft943_5a-0001 >EsuBft943_5 ID=EsuBft943_5|Name=EsuBft943_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=polypeptide|length=183bp
MEALSRLVPETPPAGSTTGAGGGXPHTILVKWTHAVCVWRVRHWRCSPDS
QGGPDRHRPVHRKNGEHDDGKLGTVMEALSRLVPETPPAGSTTGAGGGGE
SRGGRHALPGAGRVDQAPITGQGLEGERGLPDTAPQGPTLPSAGGVSRES
ETETSDPPARYDPTMKARIPRLKQLYFDGQEKN back to topmRNA from alignment at Scaffold_420:533237..534285- Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below. >EsuBft943_5a-0001 ID=EsuBft943_5a-0001|Name=EsuBft943_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=mRNA|length=1049bp|location=Sequence derived from alignment at Scaffold_420:533237..534285- (Ectocarpus subulatus male Bft15b)
GTCAGCCGTGCTTATCCAGCAGCACTAGGCTTGAAACCAATCAACACTCT
AGAGCGAAGGTTATCCCCATACTATCCTAGTGAAGTGGACACATGCCGTC
TGCGTCTGGAGAGTTCGGCATTGGCGGTGCAGCCCCGACTCACAAGGAGG
TCCAGACCGCCATCGACCAGTCCACCGCAAAAATGGAGAGCATGATGACG
GAAAGTTAGGAACCGTCATGGAAGCCCTGTCTCGGTTAGTGCCCGAGACA
CCGCCCGCTGGAAGTACGACCGGAGCGGGCGGCGGGNATCCCCATACTAT
CCTAGTGAAGTGGACACATGCCGTCTGCGTCTGGAGAGTTCGGCATTGGC
GGTGCAGCCCCGACTCACAAGGAGGTCCAGACCGCCATCGACCAGTCCAC
CGCAAAAATGGAGAGCATGATGACGGAAAGTTAGGAACCGTCATGGAAGC
CCTGTCTCGGTTAGTGCCCGAGACACCGCCCGCTGGAAGTACGACCGGAG
CGGGCGGCGGGGGAGAGTCACGGGGGGGAAGGCACGCCCTTCCCGGCGCT
GGTCGTGTGGATCAAGCGCCGATCACCGGACAGGGGCTCGAGGGAGAACG
AGGACTGCCGGACACAGCCCCGCAAGGACCCACGCTGCCGTCTGCGGGGG
GCGTCTCGCGCGAAAGCGAAACCGAAACCAGTGACCCGCCGGCAAGGTAC
GACCCGACCATGAAGGCCCGTATCCCACGCCTCAAGCAGCTATACTTCGA
TGGCCAAGAAAAGAACTGAGTAATGTTCAAGAACGACCACATGACTCAGG
TAGGTGCAAACGTGCGGAATGATGCATGCTCTGAACGATAGCCGAGACAT
TGAGATCCAAGGGATGGATGACGATGGAATGATAGAACAGGGGGTAGCTG
CAGAAGAGGTTCATGTGTACCGGGATTTGTGGGGCACGTTGGTAGGAGCG
ATTTCAGACGAGACTACCAAGCTTATGGTTTACAATAGTAAGGGGCCCTC
AGCAGCGTGGCGTGCACTTGAGCAGACGTTCACCCCACGAACTGGTGGC back to topCoding sequence (CDS) from alignment at Scaffold_420:533237..534285- >EsuBft943_5a-0001 ID=EsuBft943_5a-0001|Name=EsuBft943_5a-0001|organism=Ectocarpus subulatus male Bft15b|type=CDS|length=552bp|location=Sequence derived from alignment at Scaffold_420:533237..534285- (Ectocarpus subulatus male Bft15b)
ATGGAAGCCCTGTCTCGGTTAGTGCCCGAGACACCGCCCGCTGGAAGTAC
GACCGGAGCGGGCGGCGGGNATCCCCATACTATCCTAGTGAAGTGGACAC
ATGCCGTCTGCGTCTGGAGAGTTCGGCATTGGCGGTGCAGCCCCGACTCA
CAAGGAGGTCCAGACCGCCATCGACCAGTCCACCGCAAAAATGGAGAGCA
TGATGACGGAAAGTTAGGAACCGTCATGGAAGCCCTGTCTCGGTTAGTGC
CCGAGACACCGCCCGCTGGAAGTACGACCGGAGCGGGCGGCGGGGGAGAG
TCACGGGGGGGAAGGCACGCCCTTCCCGGCGCTGGTCGTGTGGATCAAGC
GCCGATCACCGGACAGGGGCTCGAGGGAGAACGAGGACTGCCGGACACAG
CCCCGCAAGGACCCACGCTGCCGTCTGCGGGGGGCGTCTCGCGCGAAAGC
GAAACCGAAACCAGTGACCCGCCGGCAAGGTACGACCCGACCATGAAGGC
CCGTATCCCACGCCTCAAGCAGCTATACTTCGATGGCCAAGAAAAGAACT
GA back to top
|